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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000409_pilon:204895..209052- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_015042 ID=XLOC_015042|Name=XLOC_015042|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4158bp|location=Sequence derived from alignment at sc0000409_pilon:204895..209052- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGGAGTCTTTGCTCTTTGCCTGAGAAAAGAACAGAAATGGAGAGA
CGTTCGTGATGAAAAAGATCGAAGTTCACAGAGGTTTCTTACGATGAGGA
TTATTATGTTGAAAACAAAACACTTTTTGAATACTTTTTCGTCAATGTTT
ACCTGATGAGTGTGAAAGATATTATTGTTAACTTACCCCTTATATTTCAT
ATTTGATTAATTGTACTATAAGCCTTTGTTTGCAAGTGCGATATTCTCTA
TTTCATTGATAATCATTGATAATCATTAACAGGGATACAAGATTATATGT
TCCATTAAGCTAATCACACGATTCATAATATTCGTTGCATCTACGCTTTG
TTTAGGTATTGCTTCAGCTTCCCGAAAGAACATCAATCTGAACTTGAGTC
CTCATTGACAGACTTTAGACCTTCCTTCAACCATAAACTGATATGGAATG
ACATTGAGACTCCAAGCATCAGTCAACAATTTGCTGTCGTGAACTCTCTG
CCCAACTTCCATTATTATTCTTGGGATGGGAAACCTGTCAAAGTGGTTCG
ATATCAGGATCGCTTACCATCTGCATCCAAACCAAAATCACCAAGAAATA
TAATTATCAAGGCGTTTGAAAATGCAGACTGCGCTGGTTATGTCATTTCG
TCAACATTATCACATATCACTGGTCACCCCACTGATTTACCGCATGTTAT
CTCTCAAACAAGCAAGAGAAGAAAGGTTTTTAATTCAGAATTAGTTTTTT
ACTGATTTCTCATATTGATTTTTGCTGTAGTTATGTAACAACTGATTTAA
AAGAATGATCCTTATTTTAATAATAATAATAATAATCGCACATTTTGGAG
TACACTTGGCGATGAATCAAGAGTAACGAGGAGAATTTCTTCAGGTTCGT
TAATTTGTGTGCGAGTTTATTGATATCTCTAACCATCAATTTCATTTAGG
TAACCAAATCTTTCCTGGAGAATAATGAAAACTCACGAGAAGGATCCACT
CGACAAGTAATGATTTTAATTTTCCTAAATCAGACTCTCGCTGTAAAATG
CTTCTGTTTCGAAGCTAACTATGTTTGCGCTAGAAAAAGTCGATCATTTA
CAAGATTGATAAAGCACTTTTTTCATTAATTTTTTAGGAAGCACATTCAA
GTCATGCTCATTTAGAGAATTCTTCAGTTGATTCCTCCGATCAAATGGAA
GTACGTCATTTTAATTCTTTTGATGTTTTGGGGAGTTGCGTTGGATTGTT
GAGTTTGTCGGTTCACTTAAGTTTAACGCTATGTTTTAATTGAAAATCAT
TTGTTACTCTCAGAGCCAAACGTTTGAAGATGGATGGAATGAAAATGAAG
ATACTGAAATAGCACATACACCTACCAAAGAAGAAAATTTTGTATGATCT
TTTGTTTTACCGAAGTTATGAGTAATAATGTCCTTTTTAGCATTACTTAG
TTCAAATTTTTCAATTCTGTTCGTTAAGGAAAATGTAATCTCTTCATCAC
AATTTTTTAATTGTCTTACTTTGTTTTTAGCTCCAGCTCGAACAAGCATC
ACCCCGTGTAACTTCTCTCTTCAAATTTTATTGCTCGGAATTGATTAATC
GTGGATCCATTTTCTGGAGAGTTCTTACAGATCGTCAGCAAGTTGTTTGC
ATGAACGCTTTTCATGAAAAAACCGGAAACTTCTTGGTAAAAATGTCTTC
TTTTGAATTTCTGTCGCTTTTTGTGATATTTATTCATGAAAAGTTTGATA
TGTGGAATCTTCACTTATTAGTTATGTCTATTTTTCGATGCCAGATTTAC
TACGCAGCAATCTGGTAAACCTGGAATACAAGCCTTTTGAACCGACTTGT
TGACAAAACCTTTCGCAATGCCCTTTTAGCCATAACACCAAAGAAGATTT
TTCCGTATTCACATCGAGTAGAGATATAAGTCGAAACTGGTCAAGTGTGA
ATCTTGTTCTTCCGGTATGTAAACACCTTCTGCCGCTGTCCATCGTTTAG
GACTTTTTCTTTCCAAGTCATGTGCAAAAGAAGGAAGAGTTTGTTTAAGA
AGGCGGGGGTAATGTTTGTAGTTATTTGTATAATCACTTTGTCTCTTTCT
AGCCCAAAGAATTTGTTCACGTCACCTTTACAAATTTCGACGACGGGTCA
CTGCACATGTCATGCACCTGTCAAACATCTACGCTGACAACAGGTTTTTC
TGTTGGCAAGAAGTCTACTTCAAAAGTCTGCCTCCATAAAAGACTTATCA
AAAGTATAAACAACTCCGATGACAAAATCATTGACGATGCAATAGTGGCA
GAAGGCAAAACTCGAGTCGAAGATAAAGTTGTTATGCTGCGTAGTAAATC
TGGCATCGAAAAATACTCCGTTGTAGGTTCTGATGGTTCGGTGTCCTTCG
TTCACGTAACTGCTAATCTTGGTCGTCTGATGGTCAGTTGTCAATCAGGA
TCGTGTAACTTTGGCCAAGGTGGTAAAAGTCGGAAGCTTTCGTCTCTTTC
ATCTCCCGAATGCGGATGTGTTCATTTAAAGGAATTCAGACGCTTTCGAG
AGATTCCTGCTGATGAACCAGACGATGAATTAAAAGACTTCACAGAATTT
GTTATCCCGACAGAAAAAGTGAGTAGTTCAATACACAGGTTGCAAAAAAT
AAATTTTGAAGTCAAATCACGCTTTTACTCGAAACTTTTATGAACTTTAC
TACATGACCTTTATTTCTGATTGGTTTGAATTTAATGAGACTAATAAAGT
TATCAGGGGTTATCAGGCCGTGGCAAATTGATTTTGTTTTTCAGTAACCT
GAAAAGAGTTGAACGTTTTCATTGGGATAATGGGCTACTAAGGTTGATTG
TTTTTCATATTATTTTTTCAATAAATTTCTTGTTTCTTATCATAAAGTTG
GAAGAAGTATTCGATGTCGAAAGTGGTTTATGGACCTTCCACAAAAATTC
GCCGAGCAAAATAAATGTCAGCTCTGACAGCACGTGTGAAACATTGAAAA
AGAATTTCAAAGCAAGAATAATTCCTGAAACTGGCTCCTTGTATCAGTCC
AACTCAGAAAAGTGTTCGTGTGGGGTAGGTAATAGTTTTTAAGCGTATAT
GCTTCTTGTATGATTGCCATTTAGCGTGTAGAAACACTTAGATCGCTGAA
TTTTCTGGTTCTCGTTATGAAATCAATTTCAAATCATTGCTCATAGAATT
ATTGGCAAAAGAAGAAGCGTACTTCCACGTTATACTCGATGATGAGTGCA
TGTGACATCGAGGTCATCGAAAAATACTGCGTTTGTGGTAAACGAGAAGA
ATGGGATGGTGCTGAGCACTCTATATATCGGTCAACGCGTTCCACGTGTG
CTGGGTATGAGCTAGGTATGAACTTTTTGGTTAAAGGCGTCATTAAACGG
TCTTGTACTAATGTGCTTAATTGTGATGTATTAAACACGATTTTATAGAA
GATGTATCTTTCATTATCGGTTTTATGGTTCCCTAAATGTTTACTCCCTT
TTCTTTAGGTTGGCAGTTCGTAAACACTGTGCTTGATAGTGGAACATTCA
GTGGTTTTATTTCAAAAATGACATACAATTACGAGCTTTCATCCTCTCCA
CGTCCGTTCATGTCGCTTCAAACGTTCATCAAGTGGTTTTTTGGATGGGC
TTCTGCAATGAACATTGATTTTCGGATGGGTTGTAAAGGCTGCGGTGAGA
ATCCCAAGGTAAAGATCCAAAACTATCTGTTTTTTGTAGTTTAGATACGC
TGCACAAATAATATAACCAAAAGTGTTGCCCTCAAAATTATGTGGAAATT
TACTGTAACCTAACTTCTGATTCACAATTTCTTTATTTCTTAGGTATTGG
CATGTGACGGAACCAAAATTGGTACTAACTTTAAAAACGTGTTTGTCACT
CCGATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTTGGTACTAT
GGATCGCTGCCCGTTGAAAAACCAGTTAGCAAGAACAGCATTTGCCGAAT
TAGTTGATCAGGATACGACTGAGCACTTGGAGGCCATCCCTGACGAGTTA
AAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCATCTTAAAAA
GGCTTACTCCAATGTTTACAAACAACTGTCAAGAACGTCTTCCGTCGACA
CAATTATA Coding sequence (CDS) from alignment at sc0000409_pilon:204895..209052- >XLOC_015042 ID=XLOC_015042|Name=XLOC_015042|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4368bp|location=Sequence derived from alignment at sc0000409_pilon:204895..209052- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGGAGTCTTTGCTCTTTGCCTGAGAAAAGAACAGAAATGGAGAGA
CGTTCGTGATGAAAAAGATCGAAGTTCACAGAGATGCTTGGAGTCTTTGC
TCTTTGCCTGAGAAAAGAACAGAAATGGAGAGACGTTCGTGATGAAAAAG
ATCGAAGTTCACAGAGGTATTGCTTCAGCTTCCCGAAAGAACATCAATCT
GAACTTGAGTCCTCATTGACAGACTTTAGACCTTCCTTCAACCATAAACT
GATATGGAATGACATTGAGACTCCAAGCATCAGTCAACAATTTGCTGTCG
TGAACTCTCTGCCCAACTTCCATTATTATTCTTGGGATGGGAAACCTGTC
AAAGTGGTTCGATATCAGGATCGCTTACCATCTGCATCCAAACCAAAATC
ACCAAGAAATATAATTATCAAGGCGTTTGAAAATGCAGACTGCGCTGGTT
ATGTCATTTCGTCAACATTATCACATATCACTGGTCACCCCACTGATTTA
CCGCATGTTATCTCTCAAACAAGCAAGAGAAGAAAGGTATTGCTTCAGCT
TCCCGAAAGAACATCAATCTGAACTTGAGTCCTCATTGACAGACTTTAGA
CCTTCCTTCAACCATAAACTGATATGGAATGACATTGAGACTCCAAGCAT
CAGTCAACAATTTGCTGTCGTGAACTCTCTGCCCAACTTCCATTATTATT
CTTGGGATGGGAAACCTGTCAAAGTGGTTCGATATCAGGATCGCTTACCA
TCTGCATCCAAACCAAAATCACCAAGAAATATAATTATCAAGGCGTTTGA
AAATGCAGACTGCGCTGGTTATGTCATTTCGTCAACATTATCACATATCA
CTGGTCACCCCACTGATTTACCGCATGTTATCTCTCAAACAAGCAAGAGA
AGAAAGGTAACCAAATCTTTCCTGGAGAATAATGAAAACTCACGAGAAGG
ATCCACTCGACAAGTAACCAAATCTTTCCTGGAGAATAATGAAAACTCAC
GAGAAGGATCCACTCGACAAGAAGCACATTCAAGTCATGCTCATTTAGAG
AATTCTTCAGTTGATTCCTCCGATCAAATGGAAGAAGCACATTCAAGTCA
TGCTCATTTAGAGAATTCTTCAGTTGATTCCTCCGATCAAATGGAAAGCC
AAACGTTTGAAGATGGATGGAATGAAAATGAAGATACTGAAATAGCACAT
ACACCTACCAAAGAAGAAAATTTTAGCCAAACGTTTGAAGATGGATGGAA
TGAAAATGAAGATACTGAAATAGCACATACACCTACCAAAGAAGAAAATT
TTCTCCAGCTCGAACAAGCATCACCCCGTGTAACTTCTCTCTTCAAATTT
TATTGCTCGGAATTGATTAATCGTGGATCCATTTTCTGGAGAGTTCTTAC
AGATCGTCAGCAAGTTGTTTGCATGAACGCTTTTCATGAAAAAACCGGAA
ACTTCTTGCTCCAGCTCGAACAAGCATCACCCCGTGTAACTTCTCTCTTC
AAATTTTATTGCTCGGAATTGATTAATCGTGGATCCATTTTCTGGAGAGT
TCTTACAGATCGTCAGCAAGTTGTTTGCATGAACGCTTTTCATGAAAAAA
CCGGAAACTTCTTGCCCAAAGAATTTGTTCACGTCACCTTTACAAATTTC
GACGACGGGTCACTGCACATGTCATGCACCTGTCAAACATCTACGCTGAC
AACAGGTTTTTCTGTTGGCAAGAAGTCTACTTCAAAAGTCTGCCTCCATA
AAAGACTTATCAAAAGTATAAACAACTCCGATGACAAAATCATTGACGAT
GCAATAGTGGCAGAAGGCAAAACTCGAGTCGAAGATAAAGTTGTTATGCT
GCGTAGTAAATCTGGCATCGAAAAATACTCCGTTGTAGGTTCTGATGGTT
CGGTGTCCTTCGTTCACGTAACTGCTAATCTTGGTCGTCTGATGGTCAGT
TGTCAATCAGGATCGTGTAACTTTGGCCAAGGTGGTAAAAGTCGGAAGCT
TTCGTCTCTTTCATCTCCCGAATGCGGATGTGTTCATTTAAAGGAATTCA
GACGCTTTCGAGAGATTCCTGCTGATGAACCAGACGATGAATTAAAAGAC
TTCACAGAATTTGTTATCCCGACAGAAAAACCCAAAGAATTTGTTCACGT
CACCTTTACAAATTTCGACGACGGGTCACTGCACATGTCATGCACCTGTC
AAACATCTACGCTGACAACAGGTTTTTCTGTTGGCAAGAAGTCTACTTCA
AAAGTCTGCCTCCATAAAAGACTTATCAAAAGTATAAACAACTCCGATGA
CAAAATCATTGACGATGCAATAGTGGCAGAAGGCAAAACTCGAGTCGAAG
ATAAAGTTGTTATGCTGCGTAGTAAATCTGGCATCGAAAAATACTCCGTT
GTAGGTTCTGATGGTTCGGTGTCCTTCGTTCACGTAACTGCTAATCTTGG
TCGTCTGATGGTCAGTTGTCAATCAGGATCGTGTAACTTTGGCCAAGGTG
GTAAAAGTCGGAAGCTTTCGTCTCTTTCATCTCCCGAATGCGGATGTGTT
CATTTAAAGGAATTCAGACGCTTTCGAGAGATTCCTGCTGATGAACCAGA
CGATGAATTAAAAGACTTCACAGAATTTGTTATCCCGACAGAAAAATTGG
AAGAAGTATTCGATGTCGAAAGTGGTTTATGGACCTTCCACAAAAATTCG
CCGAGCAAAATAAATGTCAGCTCTGACAGCACGTGTGAAACATTGAAAAA
GAATTTCAAAGCAAGAATAATTCCTGAAACTGGCTCCTTGTATCAGTCCA
ACTCAGAAAAGTGTTCGTGTGGGTTGGAAGAAGTATTCGATGTCGAAAGT
GGTTTATGGACCTTCCACAAAAATTCGCCGAGCAAAATAAATGTCAGCTC
TGACAGCACGTGTGAAACATTGAAAAAGAATTTCAAAGCAAGAATAATTC
CTGAAACTGGCTCCTTGTATCAGTCCAACTCAGAAAAGTGTTCGTGTGGG
AATTATTGGCAAAAGAAGAAGCGTACTTCCACGTTATACTCGATGATGAG
TGCATGTGACATCGAGGTCATCGAAAAATACTGCGTTTGTGGTAAACGAG
AAGAATGGGATGGTGCTGAGCACTCTATATATCGGTCAACGCGTTCCACG
TGTGCTGGGTATGAGCTAGAATTATTGGCAAAAGAAGAAGCGTACTTCCA
CGTTATACTCGATGATGAGTGCATGTGACATCGAGGTCATCGAAAAATAC
TGCGTTTGTGGTAAACGAGAAGAATGGGATGGTGCTGAGCACTCTATATA
TCGGTCAACGCGTTCCACGTGTGCTGGGTATGAGCTAGGTTGGCAGTTCG
TAAACACTGTGCTTGATAGTGGAACATTCAGTGGTTTTATTTCAAAAATG
ACATACAATTACGAGCTTTCATCCTCTCCACGTCCGTTCATGTCGCTTCA
AACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTGATT
TTCGGATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTTGGCAGTTCG
TAAACACTGTGCTTGATAGTGGAACATTCAGTGGTTTTATTTCAAAAATG
ACATACAATTACGAGCTTTCATCCTCTCCACGTCCGTTCATGTCGCTTCA
AACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTGATT
TTCGGATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTATTGGCATGT
GACGGAACCAAAATTGGTACTAACTTTAAAAACGTGTTTGTCACTCCGAT
TGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTTGGTACTATGGATC
GCTGCCCGTTGAAAAACCAGTTAGCAAGAACAGCATTTGCCGAATTAGTT
GATCAGGATACGACTGAGCACTTGGAGGCCATCCCTGACGAGTTAAAACC
TTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCATCTTAAAAAGGCTT
ACTCCAATGTTTACAAACAACTGTCAAGAACGTCTTCCGTCGACACAATT
ATAGTATTGGCATGTGACGGAACCAAAATTGGTACTAACTTTAAAAACGT
GTTTGTCACTCCGATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTC
TTGGTACTATGGATCGCTGCCCGTTGAAAAACCAGTTAGCAAGAACAGCA
TTTGCCGAATTAGTTGATCAGGATACGACTGAGCACTTGGAGGCCATCCC
TGACGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACC
ATCTTAAAAAGGCTTACTCCAATGTTTACAAACAACTGTCAAGAACGTCT
TCCGTCGACACAATTATA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000409_pilon | genome | sc0000409_pilon:204895..209052 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1870-2184:316 |
| Aaloc | 1672-1869:649 |
| Aaloc | 1501-1668:963 |
| Aaloc | 1324-1500:1262 |
| Aaloc | 808-1323:2057 |
| Aaloc | 652-807:2629 |
| Aaloc | 574-651:2846 |
| Aaloc | 511-573:3022 |
| Aaloc | 454-510:3210 |
| Aaloc | 85-453:3803 |
| Aaloc | 1-81:4159 |
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