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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:470581..474138+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014964 ID=XLOC_014964|Name=XLOC_014964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3558bp|location=Sequence derived from alignment at sc0000001_pilon:470581..474138+ (Clytia hemisphaerica_ch_hm2_pilon)
gaaaatcaaaacaacaacaaccaccaaAGCGTAAAGGTTTTGGTAAAAAC
TTCATCAACTTCAAAGTTTCTGGATGTATTTCTGGGGAGAGAAAGCCTTG
AAGAAATGAATCCAGATGATCCTTGGGGAAATAACGTGAATGCTGGAAGA
GGCGTTTGTGGATTTGATGATAACTTTGGTAAAGATGAGGAatcaaagga
aagaaaaaaaCCTGTACAAACTGTAATCAATGATAACTATTCTTCAACGC
TTGGTGAGATATTATGATGGTTTTTTTCATCTCATCACCGCCATATGTTT
TAATTGGGGTTTAATTGCAACCATATTCAGAATCAATAATCAACGTTTCC
TGTCAAAATTTAGTGCTGATTGCAGTAATAGAATTGAAGTTGTTTTTAAT
ATGACGTCGTTTATCGTCTTTTGGACTTTGACGGTTTGACGTGTTGTTAC
ACGCGACGTATTTCATAAACGCAGGGCTCCCACAGCTCCTCAAATCTCCT
CAATTCTCCTCAAATCTCctactttttctcgaatttctccaatattttct
tcaaatctcctcaattaaatttgaccaaaaataaaaaaacattcaaagta
GTATCGCTGGCCTTTAAAAGATGtttcgaaaattgattttcaagaaTAAC
ATGCAAAATCttctgctcgcttcgctcgcacatcTCTTTACTCTAATATC
ATGTTTCCATTTCCtcattgtttttcaataacTCAAAATCAGTGGCGTTC
TAGCAGGGACAGGGGCCACGGCCACGACGATATCAACTCTTATCCACTAC
ATATTCTCCTCTTCATAAAATACCTACtctagtaaaagtttagaaactct
ggggggggCTGCGACTTCGGAAAATTAAGGGCGTTATTTCGAAAATAGAT
TATTGCCGCTATTGGTTCATGCTGTATATAAAATATGTCTAAGGACAATT
ACCTAGcccccaccccccAAGAAGGAGACTTTGGTAAACCTTTCCGTTGT
TTAGTTTGTAAAAAGCTCATTTTTACAACAAAAAACTCCCTCTTTCTCTC
ACAGTGTTGcttttttaacaacaaaaagcCTCATTTTAACTTGACAAGTT
TACTGTCAAGAAAAACTCCTCAAATTTTTACAGAAATCTCctcgaaaaag
tgaaaaatcctCCTTAGTTCTCCTCAATTCtccttaaatttgaaattttg
aaagctttggGAACCCtgtaacgtcaaaatcagttatTTTTAAACTGGCt
taatttaactttttgatCAAGCACTTACTGAAATCATCTTGCTAATACGC
TTCGTTTGGCTATAAACGAAAGATATAGTGCAATAGCCCGAGGGATAATA
GCAATATGTATttccctagaatttcagccaaaatgtttaaattttagtcc
caatttcaagaatttatgaccctttgagggagtcgatttctgattttcgc
aattttggaaccctttcagagactaaatttgcttttaaatggttttttac
CTCTCAAATTGGAGGAACTTTCGGATAGAAAATAGAGGAtatgaaaaagg
gacccttatgactcgcacatacccggcacccttTTTGCAtaagtaccccc
ctccccccggagCAATAGGAAGCGGTGtccgtcacgcaaaatatggtTCG
GGAGTTACCTTAACTCGCTTAAGAAGATGAGTTTTGATACTAAACTGATT
AGACCTTAACatcacgtcatcacgcaaaatttttgccCTTATCACGATCA
TAAAATAATCCTCAAATTCGACCacgcaaaaattaatgaaaatcgCCAGC
AGGCACACGacattgttttaacgttcatttgAAGTCCCTTGGGAGTCCAA
AAGTTACAAGGGTCGTGTTCACACTGCAAACCTTACTTAATTAAATCCAT
TACCaacaaacaaagagatttatgatggatgaatacactggtttattaca
gttctttgtaggttcacgagatctattataacacggtaattgatcttgct
taaggcttctcattggtcgattttttattgagagtttcgatttcacctgt
gattggttgatattggtatccatacatcacttgaaatccgcaaacatatt
ttttctaatggttttactcattaactgcattcatcttagacatcaacaac
accgtttgcactatttctaattttttcctcagttcattcgtttttgaaat
cgtaaaactttttgttcactacacacattctttgtttatgcttccttaat
aaaatcttttattttaagggaagcctctaccctacccttaagacaataga
gcctacgactcttaattaaggaagatcgattaaaaattacaatactacgc
gttcgactctttgttaaatgcacgttctgtattgtagtcaacaaaagatt
ctcctaactacatttttattaaggaagtAGTAGTGTGAACACGATCAAGG
ACTCCTAGCAAGcctgttgatattttttaagcACTTGCGGCTCATTTGGG
GGAATTTTTTAAGTATGAAAAAGACTGTTTTTGGCACTATTgggaaattt
ttgagaaaagtgTAGTTGTACAGAGGTTTTATCCACGATAGTAACGTTCG
tagtgaaaattagttcctatTACCACATTACCTGGCCGTTTGCTTTTGTA
GTAGCCGTCTGTTATTCAGGTCTCATAATAGTACACCATCACTTaacgtt
attttataaaaactgaATACCAAAAGTTCAATGAGGATAACTCGATAATC
TAACTCGATAAAGACTAGGAAAATTGTTAATTTTGTTCTTTATTCAATTC
TTTTATTAAAGTCTGATGGGCTTTTCCACAAAAAAGATAATTGAATattg
gggtggaggatataatatTATTTTCGGAAATTTACCTTCAGGACAGCAGG
TCAAAAACGCCTCCCCcgcccggacaagcatcagttagccccctggacat
tcaaaattgcccttaaacagagcaaaattacccctaaacagagcaagttt
accccaaGGAAaactttgtagatttttcattaCCCCCAGGACACTATATC
CTACACCCCCTCCTATGTACATACATTTTCTGGAAAGAGCCCAATTTCAC
ATAAAAAGTCCGTTTTAACGTCTTttatttgacccccccccccgccttgA
CTTAGACAGGGACGTCTTTTAGGTTACACTTATGTCTTACTATTTATTTC
AGAATATAAGCTACAGCGAgtgcaaaagaagaaaaacaacggCAGCTCTC
GAAATCCTGCCAAAGATATGTTAACTTCCATGCAAACGCAACGTGAATCT
TTCATGGCCAACTTGATTGATAAAAATGATTCTACTTATAATACTGTGAT
GAGCACTGGTGAAAATCCTTCGTTTATTGACAATTTATATCAAACCAATT
CCATATATCGACATTTGAATCCGCAACAAGCTTTAGAATCTTCAGAAAAA
ATCCCAATAGTTTATCACGATGAACTTAACAATGTAAATGGTCAAGAGAA
AACACAAATTAACGGAGAAATGAAGAAACAGATCACTGAATATAAAGAAG
AAACGTAG Coding sequence (CDS) from alignment at sc0000001_pilon:470581..474138+ >XLOC_014964 ID=XLOC_014964|Name=XLOC_014964|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1218bp|location=Sequence derived from alignment at sc0000001_pilon:470581..474138+ (Clytia hemisphaerica_ch_hm2_pilon)
gaaaatcaaaacaacaacaaccaccaaAGCGTAAAGGTTTTGGTAAAAAC
TTCATCAACTTCAAAGTTTCTGGATGTATTTCTGGGGAGAGAAAGCCTTG
AAGAAATGAATCCAGATGATCCTTGGGGAAATAACGTGAATGCTGGAAGA
GGCGTTTGTGGATTTGATGATAACTTTGGTAAAGATGAGGAatcaaagga
aagaaaaaaaCCTGTACAAACTGTAATCAATGATAACTATTCTTCAACGC
TTGgaaaatcaaaacaacaacaaccaccaaAGCGTAAAGGTTTTGGTAAA
AACTTCATCAACTTCAAAGTTTCTGGATGTATTTCTGGGGAGAGAAAGCC
TTGAAGAAATGAATCCAGATGATCCTTGGGGAAATAACGTGAATGCTGGA
AGAGGCGTTTGTGGATTTGATGATAACTTTGGTAAAGATGAGGAatcaaa
ggaaagaaaaaaaCCTGTACAAACTGTAATCAATGATAACTATTCTTCAA
CGCTTGAATATAAGCTACAGCGAgtgcaaaagaagaaaaacaacggCAGC
TCTCGAAATCCTGCCAAAGATATGTTAACTTCCATGCAAACGCAACGTGA
ATCTTTCATGGCCAACTTGATTGATAAAAATGATTCTACTTATAATACTG
TGATGAGCACTGGTGAAAATCCTTCGTTTATTGACAATTTATATCAAACC
AATTCCATATATCGACATTTGAATCCGCAACAAGCTTTAGAATCTTCAGA
AAAAATCCCAATAGTTTATCACGATGAACTTAACAATGTAAATGGTCAAG
AGAAAACACAAATTAACGGAGAAATGAAGAAACAGATCACTGAATATAAA
GAAGAAACGTAGAATATAAGCTACAGCGAgtgcaaaagaagaaaaacaac
ggCAGCTCTCGAAATCCTGCCAAAGATATGTTAACTTCCATGCAAACGCA
ACGTGAATCTTTCATGGCCAACTTGATTGATAAAAATGATTCTACTTATA
ATACTGTGATGAGCACTGGTGAAAATCCTTCGTTTATTGACAATTTATAT
CAAACCAATTCCATATATCGACATTTGAATCCGCAACAAGCTTTAGAATC
TTCAGAAAAAATCCCAATAGTTTATCACGATGAACTTAACAATGTAAATG
GTCAAGAGAAAACACAAATTAACGGAGAAATGAAGAAACAGATCACTGAA
TATAAAGAAGAAACGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:470581..474138 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 256-609:3205 |
| Aaloc | 1-252:1 |
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