XLOC_014915 (mRNA) -

Overview
NameXLOC_014915
Unique NameXLOC_014915
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000267_pilon:312702..316173-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014915 ID=XLOC_014915|Name=XLOC_014915|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3472bp|location=Sequence derived from alignment at sc0000267_pilon:312702..316173- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACACCAGCATTGGAAAATATTCATATGTAAGTTTTTACCTCTAA TGTTTTCTTTCTAACAAGAATGCTCTAGGTCCGTCAAATAAATACTCAAT TTCATTAATCTGTCTTGAAGGTTTTGTGTTTAAATAAGAGTAATATCGTT TGATTACTCATCAATTTTAATTTACAAGCTTTCTACATTGGATTAACACG GATGTCATGTGGAGCAAGATTGGTCAAAAAGAGGAAAGGAAAAACATTTT TTTTGCTTATATCAGCATAAAATTACAAAAGGCAGACACAGTGTCTGATA TAAAATATGTGTCTTAATATGAAATGAAATGAAATACAAAATAAAACCTT TAAAGAGAGTTGAATTGCTAAGAAATTTAAAGCATAAGAGCTCTCAAGAA GATGAACTCCGCTGGAATAAGAACCACCCTGAAAAAAATATCTTACTTTA TAAAAGGCATATCTTTAGGCTGAGCTTAACCAATAAATGATGGAATTTTC GATTTCTGACATTCAAGTATCTTTTTGAGGACATCAAGCATATAATACTG TATTCCAAATTATATTTTATTTAGAAATTCGCTCAGTTTTCAATGAAACC CATACTAAAATTTAATCCCTTTCTTCATTCAGCTCCAGTAAAGATGATAA CGTTACTGCCAATAACAGCAATGAGCCAATCACGAAGAAGCAGCGTCAAA GTGACAAATCACCGAAGACCACCACATCAACAACAGAGAATTCACCTTCA TCTGCAAGCAACACCAACAATACTACCTCTAACTCAACTTCTGAATCATT GGCACAACTTGCTCAAAGTGTCATCGAAGAAATGGATATGAAACGCAAGA ACGATGAAGCTATGATTTCTGGTATGTTAAGAAGATTTTCTTTCATTGCA GGTTTATTTTAAGGGATGATAGAGACTAAGCAAAGACTTGTACTTAATTG GCTGCGACAATATTTAGTTAGGCTTTATTCCCTTGGGACCTAATCAACCA TTAAAGGATTTCTTAGGCCCTATTTCCCAAGTGTTTTTTTCCAATTTGAC TAGTTCAAACTTTAAAATTGTTATATCTCCGGATATAAAAGGGTTCAGAA GCTCATTCATAGCTCGCTGGATAGCTTTAAACTTCTTTCTTTTTAACGGC GTCGGAAAGGATATGGTAGGCGAGGGGTCAAGCCGGAGTTTTTACAAGCT TTTATTTGATTTGGTTGGTTGTTAACCAGTAATAAAACAATTTTATTACT TTTTCTAAAGAATGCGTCATCTCTATTATTTCAAATGAACAATCAGTGAA GTATCTTATAAAAACTCTAGCCCATCTCTAGGCGAGGCGAGGGGTCTTAT AAAGCGTACGGCCCCTTTGTACCCACATGAATAAGTTGGTTCTGGTTGAT TTCGCACAATTTTTTCCTTTCCATTATTTTTTATTGGTTGATTAACGACC TTGTCAGAGACTCAGGAATAGAGTTTAAAGAGAATGTATTCTTTTGTTTC TTTCAGAGTTTCGTAAGATGATGGAAATGCAGACAGACACGATGTGTAAC ACTCTGCAGCAATCCTTCGGTAAACTTTACCAATCTTCTAACGAGACTTG CCAAGAAAAGCTCCAAAAACTTTACAACATCCTCGGAAGGATCAGTAAGT CTAAAAGTTTATGAGATCTTTGGCGGAATAGTCAGAGTTAGCTTAGAAAT ACTCGAGGGCACATAAGGCATAGATTATTTCCATCCCTTTTGCAAACATA TTTTTTGGAAGAGAGGGCTGTCTTATACTAATCAACTCTGTTAATCTAAA CCCTTGACACTTTGTGATAAGTCTTTCAAAATAAGTGTCTTTTGATGGTA TCGCATTTGAAATAATTTTCGTTTTTTTTACATATGGCATAAACTATTTC CCTCCATTCTGCACTGTTCTGCATAATTTTTTTTTGGCTTTCAGGAATTT CAGTCATAGTAATAGATCTGAAAACGTTAGGTTATAATAGTCCTACCCTG TCTTAAAATAATCGACTATGTTATATAAAACTCCTGACACATTGTGATAA GTCTTTCAACACAGTGAATTTTGATGTCTTCGCAACTAAAATACTTTTTC GTTTTGTCTACTATGTACAGGTCAGTTAGAACAAGAAATGTTGACTTTCA AGGACGCTTTGAAAATGTTATATTCCGAAGTTGAAACCTCTAACTGAGAC AGGAAAGTGTAAATAGAGGTAGATTGCAGTTTATTTTCAATGTAGATACG ATTCTGAGACATTTTTGTATTACCAACAATAGCCTTTGGGTTAAGTTATT TTAGTCATTATATTGAAGCCTGTTATTTTTATTGGCATTAAGCTTGTGCT TTGTGCTTTAGTACATGACCAGCAAGAAAGACTTATGCTTGAGATCTTGA GACCAGATTGGATACGATAAAGTAAAGCTCCTTAAGCCTTTTTATATTTC TAGAAATTAGTTTTTCCATTAAAGTCGTTTCCGCGAGTCACATTTCATCT TGTTTTGCAAGTAAATTTAGTTTATTAGATATTTGTTGAATAGTTTAATT TATTAGGTTTGAATTGAAAAGATAAAAATAAAGTTTTCGATATAAGACTT GTTATTTTGTTTTTCAGCGCCGAAAATTTTGTATTTCAAAATATCGATTT TAAAATTAAAACAGTTTATTTTTTGGGGCTTTTTTTTCGAATATAATTAA CTTTTTCTTTTATTTGCTACTGTTTGAACTATTTTCCAAAGCACAGTATG AATTCAGATAAACCCAAACAAAATTAAATCCAATTATTCCTTCAAATGTA AAAAAAGTGCTACTGAAACTTCTTATATGACTTTTACCTGGAATTTTCGG CCAGCTTGCGCCAAACTTGGAAAATTCTGATGGAAAAATTTATGTTAAAA GAAAATTTTGAGATGAATAAAAGGAAGGTTCGTTTTCTTTTTAAAAGATT GATGAAATAAATTATGTATCATCGGCGACCTTATTAAGTAAAACACAGAA TGAAATCAGTTCTTTAATAAAAAATTCCTTTCTTAATTAATTTCCTTTTG GAAAAAAACTTTTAAAAGGACTTGCACGGAATGTCATACTCATCAGTCTT TCGCTAACCGTCGACTTGACACCTTTTAAAATTTTGAAAACGTCTTTGAA TCTTGCTACGTTTGAAATATGGTACGTCACGTCATTCTGGTCACGTTATC TCTACTCATCATCGGTGTTTTTTCCGCCACGGCTCTCGATACCGACACTA ACGAAGACGATGCCGGCAGCGAGGACATGGTTAACGAGAAACGAACGAGA ATGTCTCGACTTTACGACTTTTACCGGAACATGCAGCGGAGCGGTGGTCG TGGATACCGATACGGTGATGCATCGTATGATCGATTGTCGAGAGAACTTT TCGGTGATGATGATTTTTCGAACGATTTTGAAGATTACAAGGAAGAAAAT GATGAAAACAAACTATAAGGAA

Coding sequence (CDS) from alignment at sc0000267_pilon:312702..316173-

>XLOC_014915 ID=XLOC_014915|Name=XLOC_014915|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000267_pilon:312702..316173- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACACCAGCATTGGAAAATATTCATATATGGCAACACCAGCATTG
GAAAATATTCATATCTCCAGTAAAGATGATAACGTTACTGCCAATAACAG
CAATGAGCCAATCACGAAGAAGCAGCGTCAAAGTGACAAATCACCGAAGA
CCACCACATCAACAACAGAGAATTCACCTTCATCTGCAAGCAACACCAAC
AATACTACCTCTAACTCAACTTCTGAATCATTGGCACAACTTGCTCAAAG
TGTCATCGAAGAAATGGATATGAAACGCAAGAACGATGAAGCTATGATTT
CTGCTCCAGTAAAGATGATAACGTTACTGCCAATAACAGCAATGAGCCAA
TCACGAAGAAGCAGCGTCAAAGTGACAAATCACCGAAGACCACCACATCA
ACAACAGAGAATTCACCTTCATCTGCAAGCAACACCAACAATACTACCTC
TAACTCAACTTCTGAATCATTGGCACAACTTGCTCAAAGTGTCATCGAAG
AAATGGATATGAAACGCAAGAACGATGAAGCTATGATTTCTGAGTTTCGT
AAGATGATGGAAATGCAGACAGACACGATGTGTAACACTCTGCAGCAATC
CTTCGGTAAACTTTACCAATCTTCTAACGAGACTTGCCAAGAAAAGCTCC
AAAAACTTTACAACATCCTCGGAAGGATCAAGTTTCGTAAGATGATGGAA
ATGCAGACAGACACGATGTGTAACACTCTGCAGCAATCCTTCGGTAAACT
TTACCAATCTTCTAACGAGACTTGCCAAGAAAAGCTCCAAAAACTTTACA
ACATCCTCGGAAGGATCAGACTTGCACGGAATGTCATACTCATCAGTCTT
TCGCTAACCGTCGACTTGACACCTTTTAAAATTTTGAAAACGTCTTTGAA
TCTTGCTACGTTTGAAATATGGTACGTCACGTCATTCTGGTCACGTTATC
TCTACTCATCATCGGTGTTTTTTCCGCCACGGCTCTCGATACCGACACTA
ACGAAGACGATGCCGGCAGCGAGGACATGGTTAACGAGAAACGAACGAGA
ATGTCTCGACTTTACGACTTTTACCGGAACATGCAGCGGAGCGGTGGTCG
TGGATACCGATACGGTGATGCATCGTATGATCGATTGTCGAGAGAACTTT
TCGGTGATGATGATTTTTCGAACGATTTTGAAGATTACAAGGAAGAAAAT
GATGAAAACAAACTATAAGGAAGACTTGCACGGAATGTCATACTCATCAG
TCTTTCGCTAACCGTCGACTTGACACCTTTTAAAATTTTGAAAACGTCTT
TGAATCTTGCTACGTTTGAAATATGGTACGTCACGTCATTCTGGTCACGT
TATCTCTACTCATCATCGGTGTTTTTTCCGCCACGGCTCTCGATACCGAC
ACTAACGAAGACGATGCCGGCAGCGAGGACATGGTTAACGAGAAACGAAC
GAGAATGTCTCGACTTTACGACTTTTACCGGAACATGCAGCGGAGCGGTG
GTCGTGGATACCGATACGGTGATGCATCGTATGATCGATTGTCGAGAGAA
CTTTTCGGTGATGATGATTTTTCGAACGATTTTGAAGATTACAAGGAAGA
AAATGATGAAAACAAACTATAAGGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_014915XLOC_014915-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000267_pilongenomesc0000267_pilon:312702..316173 -
Properties
Property NameValue
Aaloc793-816:25
Aaloc412-789:403
Aaloc274-408:1965
Aaloc34-270:2840
Aaloc1-30:3473