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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:297739..301326- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014832 ID=XLOC_014832|Name=XLOC_014832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3588bp|location=Sequence derived from alignment at sc0000112_pilon:297739..301326- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGGTTATGGTCCAAACAAGTAAGATTCATATTAAATTATTATTAA
AAAACATGAACTAGTGATAGTATTTAACATAATACCTATGCTTCATAAGG
ATGCAATGTTTAAATATTTTATTCTTGAATTTATAGAAAAATAAACACTG
TATAGCTGAGTGCTACAATCAATTATGTGATACATTCGGATTAATAATCT
ATAATGTTTATTTTTTGTTTTACAGAGGTATCGTCCCAATCACTTGTGAT
GAATTGTTCAAATTGATTGAGGGCAGTACAACAGAAACAGTAAATCAAGT
TTTTTTTGTTCTTGCTTCTTTTTCTTTGCATCTTTTTAAGTTCTGGTAGA
TTTTTGTTTGTTTTATTCTGTTATGTCCGTAAAAGTTGAAATGGAGTTTG
ATACAAATAAATCTGAAATAAAATTGTTTCTAATATGAGTGGACATTACA
AAAATTGTCCATCTTCCAAAGCAGTTTGATTGTTGTCTTATTAATGAAAA
GGAGTCATGAAGAGTTAAATCGTAAAAAAAATAATAATTTGGATTTTGCT
TTATTCATGATATGCATCATTGCAATGTCTTCTTTGGACCTTACAGTTCA
TTGGTTGCAAGTGACGTATTGACTAATTTTACATCATTTGTAAACAATCA
GCTGCTAGGTCCGTGATGTAATGTCAGAAGACATTGCAATGGTGCGTATG
ATGAATATCGCATTTCATTCCATTTTTTAGTGTGATTGCTTATCAATGCT
TGCAGAAGAATGAAAATAAATACTACTGACATGGAAAAAAATGTTAGATT
TTCATTCTGCTATACAAAGCTAGTCAACAACTTGTCATGATATATTTTAT
TTTGCATTTAGAAATATCAAGTCACATTTTCTATGTTGGAAATTTACAAT
GAACAAGTCCGTGATTTATTGACTAAAGATAATCCTAAAGGTGGTCTACC
TGTAAGTTTTTATATTAGATTTATATTAGAATTAATTAATTTTTATATAT
TTTTTATACATATTTTGAGAATAAATAGTCTGTAAAATTGCTTTCATGTA
TTGTAACCACGTGAATATTTGCCTAGTTCAGAAATGAACGGAGAAACTTT
TTTTCCTATTTTACTTAATAAAGTTTCCTGCTCTTTCAAGCATTCGTCAG
TTAGTTTTTTTAATATTAGCTTAGATATATATGAAATATCTGAAATTATT
TCTGCTACTTTAGCAATCTCATCCAAAAATTCAAGGATCTTAAGTTTTTT
CTTTGGGTAAAATTATCTATTAAATTACAAATTATTCGAAATCCTATTTT
TTTAGGTCCGTCAAAATCCCAAAATTGGTGCTTTTTATGTGCAAGGTTTA
AAGTTTGTTGCTGTAGGATCTTATAAAGAAATCGAAGCCAGGACAGAAGA
AGGTAAACACACATTATTTAAAACTTCTGATTATCAGCGTAATCCTTGTG
TACTGTCACAAACCTTGTGAGGTTCTCTCCCTGTTGAATTCTGTTGAAAA
GTCTTTTCTGTTGGAAAATTTTAAGACTACACTATTAGAATCACACATTT
CATTTTTGAGTCATAAACAAAATAATCTTCACTAGGCTACGTCCTATCTT
CCTTTGTTTCGAGCGTAAAACTCCTACTCCTACTCACTGCTCTTGTTTTG
AATATTGAAATTCTCCGGATACATCGCATGCGCACTGAGGTTTTAATAAA
ACAATAGAGAGTTTCGAAATCTAAGCCAATCAGCTGGGTTTTAAATATTC
TTTTATTTGAAATCTCTATTGATAAAAATCTTTTGTGAAAGTTGTCTATT
ATGTTTAAACCTATTTATAAGCAATTCCCGGTGGGGGGGGGCTACAAGCG
GCCGTCTATAGCAGTGCCTATAGACCAAGAGTAAGGCCTAAATGCCTGGA
GCCGTCTATTGTGTAGACTATATCTTCAACCGTTAAGGAAAGTTTAAGTA
AAAACTAACCTTTGCTTTGGTTTCTGTTTGTTTAATTTTTGGGGACATTT
TGACCACCCTTTCGGGACCTATTCTTGTTTTCTTAGGACAAATTTTGTCT
TTTCGGGGCCAAGTCCTTTTAAACATTTATAAACGATGCTTCTTTATGAA
TTGAGAATATCATTCATTGCCCTAAACTTGAAACTACGTTAGCTACAATT
TTTTAGGACCTCACTGGATGATTGAACTTTCAAAATAGAGAAAATTTACT
GATTTAAAGAAAATGTTCAAGTTCTATAGATTTTAACATTAAATAATATC
TTTTCACCAATCATAGGAACTGCTAACAGAACGGTTGCTTCAACACAGAT
GAATGCTACTAGTTCACGTGCACATACTGTTGTCACCATTCAGTTTGACC
AGATTGAAAAGAATGCTGCTGGGGAAGAGACCAAGAAAAGCTCTGTCGTC
AATTTGGTCGATTTAGCTGGTAAGAATGTCTACTAGTTGGTCGGGTCAGT
TGTTATCTATTCTCATCAATGGTCTGTTCTTTTAATTTTAAATTGACAGC
AATATTTTGACAGTTTCTTTAGTAAATTTGGGAAGTATCTAGGAGTAATA
TAATGATGGAAGTTCAAATAAGCAAGTTTGTCCATTTCCTGAAAGTAGCC
AGATTAAGAATTTGACCCGGTTCAGAATTACAGCATAGCACCTGAGTATG
CTGGTTCCACTAATACAACTAGTGTTCATCCAAAAGCTAATTTCTTATTA
CTTTCCTCCCTCTCAAAGGATCTGAGCGTGCTGGTTCTACTGGTGCAACA
GGTGATCGTCTTAAAGAAGGTGCCAACATCAATCGTTCGCTATCATCTCT
TGGTAATGTCATCTCAGCTCTGGCTGATCTCTCTATGGGAAAGAAGAAAG
TCCTTGTTCCTTATCGTGATTCCGTTTTGACCAAGTTGTTACAAAATGCT
TTGGGTGGAAACAGTAAAACTATTATGATTGCTGCTTTATCACCAGCTGA
TATCAATTATGATGAAACCCTGGGTACACTTAGGTAAGTAAATGCATGTG
ACACTATTAGTAAGTAGGTAAATTGATAATACACTGCAAACGAGGTTGGC
TATTGATGTAGATCTTGCACCTGTAGAACTTCCTGAAATTTTATACTTTT
ACTTTATACAAATTGGTCATCTAACATACTAGCACACTATATATTATGAA
AATGACTTCAAATAGTTGACTAACTTAGACGGCCGACTTTCTGTCCTGTT
TGTTTGGTAGTTAAAATTTTTGCTTGAAAAATATTGAAAGAAGGCATTGT
TAGAGTAGATAGAAAGTTGGCAGAAAGTTGGCAATTAAAATCTTTGCATT
GACGTTAAGATAAATGCATTGACTTTGGAAGGCCAAAAGTATGTTTCTAC
ACCTTTTTTGATTTTCTAAAGGTATGCTGATCGTGCGAAGAAGATTAAAA
ATAAAGCCGTTGTGAATGAAAATCCAATGGACAAATTGATTCGTGAACTA
AAAGAAGAGAATGAGAAGTTAAAGAAATTAATGGCAGGCGGTGATATGAG
TGCATTACTGGCGGCCGATCCAGCTGAAGGTGGTGGCGGAGGCGGAGGAG
CTGCTGGTGGTGCTGTAATGACCGAAGAAGGTAACTGA Coding sequence (CDS) from alignment at sc0000112_pilon:297739..301326- >XLOC_014832 ID=XLOC_014832|Name=XLOC_014832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000112_pilon:297739..301326- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCGGTTATGGTCCAAACAAATGGTCGGTTATGGTCCAAACAAAGGT
ATCGTCCCAATCACTTGTGATGAATTGTTCAAATTGATTGAGGGCAGTAC
AACAGAAACAAGGTATCGTCCCAATCACTTGTGATGAATTGTTCAAATTG
ATTGAGGGCAGTACAACAGAAACAAAATATCAAGTCACATTTTCTATGTT
GGAAATTTACAATGAACAAGTCCGTGATTTATTGACTAAAGATAATCCTA
AAGGTGGTCTACCTAAATATCAAGTCACATTTTCTATGTTGGAAATTTAC
AATGAACAAGTCCGTGATTTATTGACTAAAGATAATCCTAAAGGTGGTCT
ACCTGTCCGTCAAAATCCCAAAATTGGTGCTTTTTATGTGCAAGGTTTAA
AGTTTGTTGCTGTAGGATCTTATAAAGAAATCGAAGCCAGGACAGAAGAA
GGTCCGTCAAAATCCCAAAATTGGTGCTTTTTATGTGCAAGGTTTAAAGT
TTGTTGCTGTAGGATCTTATAAAGAAATCGAAGCCAGGACAGAAGAAGGA
ACTGCTAACAGAACGGTTGCTTCAACACAGATGAATGCTACTAGTTCACG
TGCACATACTGTTGTCACCATTCAGTTTGACCAGATTGAAAAGAATGCTG
CTGGGGAAGAGACCAAGAAAAGCTCTGTCGTCAATTTGGTCGATTTAGCT
GGAACTGCTAACAGAACGGTTGCTTCAACACAGATGAATGCTACTAGTTC
ACGTGCACATACTGTTGTCACCATTCAGTTTGACCAGATTGAAAAGAATG
CTGCTGGGGAAGAGACCAAGAAAAGCTCTGTCGTCAATTTGGTCGATTTA
GCTGGATCTGAGCGTGCTGGTTCTACTGGTGCAACAGGTGATCGTCTTAA
AGAAGGTGCCAACATCAATCGTTCGCTATCATCTCTTGGTAATGTCATCT
CAGCTCTGGCTGATCTCTCTATGGGAAAGAAGAAAGTCCTTGTTCCTTAT
CGTGATTCCGTTTTGACCAAGTTGTTACAAAATGCTTTGGGTGGAAACAG
TAAAACTATTATGATTGCTGCTTTATCACCAGCTGATATCAATTATGATG
AAACCCTGGGTACACTTAGGATCTGAGCGTGCTGGTTCTACTGGTGCAAC
AGGTGATCGTCTTAAAGAAGGTGCCAACATCAATCGTTCGCTATCATCTC
TTGGTAATGTCATCTCAGCTCTGGCTGATCTCTCTATGGGAAAGAAGAAA
GTCCTTGTTCCTTATCGTGATTCCGTTTTGACCAAGTTGTTACAAAATGC
TTTGGGTGGAAACAGTAAAACTATTATGATTGCTGCTTTATCACCAGCTG
ATATCAATTATGATGAAACCCTGGGTACACTTAGGTATGCTGATCGTGCG
AAGAAGATTAAAAATAAAGCCGTTGTGAATGAAAATCCAATGGACAAATT
GATTCGTGAACTAAAAGAAGAGAATGAGAAGTTAAAGAAATTAATGGCAG
GCGGTGATATGAGTGCATTACTGGCGGCCGATCCAGCTGAAGGTGGTGGC
GGAGGCGGAGGAGCTGCTGGTGGTGCTGTAATGACCGAAGAAGGTAACTG
AGTATGCTGATCGTGCGAAGAAGATTAAAAATAAAGCCGTTGTGAATGAA
AATCCAATGGACAAATTGATTCGTGAACTAAAAGAAGAGAATGAGAAGTT
AAAGAAATTAATGGCAGGCGGTGATATGAGTGCATTACTGGCGGCCGATC
CAGCTGAAGGTGGTGGCGGAGGCGGAGGAGCTGCTGGTGGTGCTGTAATG
ACCGAAGAAGGTAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:297739..301326 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 694-909:217 |
| Aaloc | 430-690:869 |
| Aaloc | 277-426:1321 |
| Aaloc | 178-273:2284 |
| Aaloc | 88-177:2728 |
| Aaloc | 25-87:3363 |
| Aaloc | 1-21:3589 |
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