XLOC_014811 (mRNA) -

Overview
NameXLOC_014811
Unique NameXLOC_014811
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000067_pilon:1577990..1579500+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014811 ID=XLOC_014811|Name=XLOC_014811|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1511bp|location=Sequence derived from alignment at sc0000067_pilon:1577990..1579500+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGATTGAGTGCAATGGGTCAACAACATTTAACGGAAACCCAAATCTT GGCAATCATTGATCGATATGCTGATGACACCAGGAAAGGAAATGTGTGGT GGATTTCTTTTTTCGCCGATATCGATAAAGGTATGTGGGGTACTGGCTAA AATGTCTTCTTCTTATGAAGcgttcaaattttcgcgaacATATACTTTCG ATTTTTGCGAAtgtctttgaaagttttttgaataaatCGCATTTTTCACC TCGCAAATGTTGTTTCTCGcgaaaatttgcccaaataaaatttcttttga agattGGCCTCTGCCAGATTTCAAACATTACCATTTATCATCattgtgta aaaaaaaaacagaaaaaataccAAGCTAATCGCAAGAAAtgttcattttc cttaaaataaTGAAAGAGAAAGggtacgaaaatccgttttttacgGCCTA TTTAATTTTACAAAATGTTGACTGTTTCAATCTTGACCGTACTGCTCTAC CCTCAACTTTTAGTTTTCACTCAACGCGGCCTCGAGAAAACGCCGACTGC TGTTCTACCTCCAGCCGAAACATACCACATGCCCAAACCCGGTGCAACAG ACTGGACCACGGTGAACAAAGACAAACAAATGGAACTTGACGACGTTATG CAAAAAATGAGATGGAAAACCAACCAACGGCGAATTTTAGCAAAACCCTG TTTCCAAGATTTTGACAGGTGGGTTTTTGAACTACAATCAAAAACTGCAA TGCAActtgctctatcccaccaacctgaaacgctttctcgtgtctccacc ccattcttctttctaccaataaaagtgaaatcgacaacacttaaaataaa atttgtgtgtctttcacttttgtccctgggacaaaatcagTGAGTCTTTT GGGTATCTCCGtctccctcactttttgtctcatgaaataaaaaagaaacc atggggcACGCACTTTTTATCTGTGTTGGtgagatggagcatgttgcatt gcaccaacgcgaaaaaaaaacacttccCGTGTCCCCAATCCTTAAGCCAA TTTTTCAGAATAAAACCTTCTTACTACAGACGAGGCTCCATAACTCGAAG ACTCATGAGGAACGCAGATTTGTTTGAGCATAACTCCAATTTAAGAAGAC GTAGTATAAGGCTTTCTTGCCTGAATGGACccatgttcgagttaaggagg cattcgagatatagaggttcgagttaacgAGTGTCCCAAGCCTTTAAAAC GCAATCATGATCTGAAGTTCTATTTTTCATTCACATAGACACAATATAGG GTACGTGACTCGATCACAACTTCATCAATGTTTGACGTACTTGAGTTTAA ATGGAACTCCTGCTGAAGTGGATTTGGTGTATGGTAAATTTAGTGACGAC ACCGGCTTCAATTATCTGCGTTTCTTAGAGAAATTACAACCGTCTGAAGT AcaagaacaaaaatatttgaaacgtATTGAAGATTTGAAATTGACCAATA AAGAAAAGGTG

Coding sequence (CDS) from alignment at sc0000067_pilon:1577990..1579500+

>XLOC_014811 ID=XLOC_014811|Name=XLOC_014811|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000067_pilon:1577990..1579500+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGATTGAGTGCAATGGGTCAACAACATTTAACGGAAACCCAAATCTT
GGCAATCATTGATCGATATGCTGATGACACCAGGAAAGGAAATGTGTGGT
GGATTTCTTTTTTCGCCGATATCGATAAAGATGGGATTGAGTGCAATGGG
TCAACAACATTTAACGGAAACCCAAATCTTGGCAATCATTGATCGATATG
CTGATGACACCAGGAAAGGAAATGTGTGGTGGATTTCTTTTTTCGCCGAT
ATCGATAAAGTTTTCACTCAACGCGGCCTCGAGAAAACGCCGACTGCTGT
TCTACCTCCAGCCGAAACATACCACATGCCCAAACCCGGTGCAACAGACT
GGACCACGGTGAACAAAGACAAACAAATGGAACTTGACGACGTTATGCAA
AAAATGAGATGGAAAACCAACCAACGGCGAATTTTAGCAAAACCCTGTTT
CCAAGATTTTGACAGTTTTCACTCAACGCGGCCTCGAGAAAACGCCGACT
GCTGTTCTACCTCCAGCCGAAACATACCACATGCCCAAACCCGGTGCAAC
AGACTGGACCACGGTGAACAAAGACAAACAAATGGAACTTGACGACGTTA
TGCAAAAAATGAGATGGAAAACCAACCAACGGCGAATTTTAGCAAAACCC
TGTTTCCAAGATTTTGACAGACACAATATAGGGTACGTGACTCGATCACA
ACTTCATCAATGTTTGACGTACTTGAGTTTAAATGGAACTCCTGCTGAAG
TGGATTTGGTGTATGGTAAATTTAGTGACGACACCGGCTTCAATTATCTG
CGTTTCTTAGAGAAATTACAACCGTCTGAAGTAcaagaacaaaaatattt
gaaacgtATTGAAGATTTGAAATTGACCAATAAAGAAAAGGTGACACAAT
ATAGGGTACGTGACTCGATCACAACTTCATCAATGTTTGACGTACTTGAG
TTTAAATGGAACTCCTGCTGAAGTGGATTTGGTGTATGGTAAATTTAGTG
ACGACACCGGCTTCAATTATCTGCGTTTCTTAGAGAAATTACAACCGTCT
GAAGTAcaagaacaaaaatatttgaaacgtATTGAAGATTTGAAATTGAC
CAATAAAGAAAAGGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_014811XLOC_014811-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067_pilongenomesc0000067_pilon:1577990..1579500 +
Properties
Property NameValue
Aaloc337-558:1290
Aaloc133-333:516
Aaloc1-129:1