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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:109153..117290- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014798 ID=XLOC_014798|Name=XLOC_014798|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8138bp|location=Sequence derived from alignment at sc0000159_pilon:109153..117290- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGAAGGGTATCGAGAGAAAGAGCATCTGCTCTCGCTTAAAGGTAA
GAGCAATAAAATCCTGTTCGAGCAACGTTTATCTGTCTTAAACGCATATT
GACCACTTCGTAGAAGATTTTGTCCAAATTTTTTAACTCTCCTAAAATTA
TAAAGTAAATTGACGATGATATTTTTTCTGCTTCTTCTGTTTCAGTGATG
AGATTGACAAAACCATCAGTCAAACCACTGCTGCATGTCACCAATGAACC
ACAAGATTTACCAGGTACCTCCCAACTTTCATCTTTTACCCACAATTACA
CTCCATAAGATCAAACACTGTTAATTTCAAAAGTTTCCAAGTGTATTTTG
ACTACTATTTGAACCCGAATGAATTCTGCGCTTGAAAGATTAAAAAAATC
TTAATTTTCAATGCGAACTTTTATCAAGCAATGTTCTACATTTAGCCCAG
CATACACGTATTTTATAAGAACATCCAAAATCTCCTTCGGATATGTTTTT
AACATTTTAGGTTTCAATGTTCTTATTTTCACCATCTTGTAAGTAATTTT
GACCATAGTGTCCTCAAAGCCTTAAAATGTTTGTTCTTAAGATTTCAGCT
ATTGAAGCATTCTGTTCTTATATAGTTTGTTCTTATAAAAAAACTTGTAA
CATATGTTTACTTTCCCATTACCACCTTGCACAGGAGATATCTTCAACAA
TTCAATTTTCACTGACGTGGCAACTACCAAAGGTGCTGAGATGCTTAATT
GTGGTGAATTGCTCTCCCTCCCGCAAGCCTTCGGGTAAGTCATACACTTT
ACGTAACGGCCCTCTAACATCAATATAACGTCGTCACATGCCAACTTGGC
AGTATCGTCCAAAAAGAAAGATTTAACAAATAATGGCGATCTTGACGCTG
CGTTGCTACAACTAATTGTTCAATCACATCAAACCCCCCTTCTTCAATGA
CCCCACTCCCAATCCAGTTCGAAATTAGTATTAGTAAGTCTCTGACTTCT
AGATTACTTAGCTTTCCTAGCTATCTTGCAATTATACGTATAGACGGCAC
TGTTGTCACTTTTATTTTTAGGAGTATTTACCTTGGAGAGACATTTTCTT
GCTATGTCAGTATTTTGAACGACAGCAACCAAGTCACCAAAGATGTCACA
CTAAAGGTACATACCATCCGTTCACAAATCGAGTATTTTGTTAAGTAAAC
CTATCCGCGATATTTTAGTGGATAGTGGAATTTGAAGAAAAAATATAGTC
AATTCTAATTTAGGAGGAATGTTTTTATAAGAACAAACGATATTAGAAGT
ATAAAGCTTCGGTGGTCAAAATACCAAGAACCAGTTGAGAACATTTTGAG
GCTTTGGTGACTTCTTAGAAACTTGTACAAAAATACTCACAAAATGGTGA
AAATATAACAATTTGAAAACATTTTCATGCTTAAAAGTGAAAAAGTTGAG
AAGATCCAAAGGCTTCGAGAATTTTGGTCGCTGTGATAAAAAAGGGTATT
TTTCAAGACTTCCATATTTGAACAGTTTGAGAATCGAACCTCCCCGAACC
TCCCCGAACCTCTGCGCACGAGGAACACAAATTTGTTCGAGTTGTAGAAT
TTTTGAGTCTTAGAATAAGGTTTTTAAGGTATAGTCAATCGAAGAGACAA
GAAAACTTTAAGTTAGAGAGACTCCATTTTATAATCTTTTAGCGAGTTTA
TGTATTTGCACTTTTGAAGACGGTAGAGTGGCTGAAGCAATTTGGAAAAA
CCTGCAGTTCTGATCCGCAAAATCGAGGACAGTAAAAGAGTTGATTTACC
GTCGTCCTCGGCTGGTCAGGAACAAGTCAAATTATAACCTTACCTTCTCC
GTCACAAAAAAACACACATACATAAACTCGGTTTTATCTCTTTCTAGACG
GACATTCAAACATCTTCACAACGATTCCAACTAACAGCCAGCACACCACG
TGACCTTCTTTCTCCTGATGAAAGCCAAGATGAAGTGTTGAGTTATGAAG
TCAAAGAACTTGGCACTCATATGTAAGGTGTTCTACACTTTTGTGTCCTT
TGTCAAACAGAGGCCGAAAAACTTGCGGGACCAAAAACTTGCAAATTTGA
TTTTTGGGAAATTCTACTTTTTGAAGAAATTTTACTAAGAAAACCTTTGT
GATTCTTTCAAAAAGCAATCATTTAAAAACACTCTTACATTATAATAGTA
GGGGCCTGCTGTATTATATTTTTTTCTGCTCCGAATTTCATCCTTTATTG
TATCAAACAGATCTTTTAAATTCAACTTTGAAAAATCGTCAATTTTCAAT
CATTTTTGGGGTTAGGAGTTACGACAGGCCTATCTTCTTTCGAACTGTCC
CACGAAAGATGCCATGGATCATAAAGGTCGACCCCGTATTGTAATACACT
TTTTGAATGAGCCTAACACAGTCTGTGCCACTAACTCGATCGGGAAGATT
CCAAAATGGGAAGATCCTTCCGAAATGGGAAGAACCTTCCTGAACGGGAA
ATTAACTTGACTCCCGAACGGGAAGATCTTCCCGCTTTTTTACTTACCTA
GGACTTTTCGATCGGGTTGAAACTTCCCGTTTGGGAAGTTAACGCAGTTT
TTTCAAAATTAAACCAAATTTCCACGGTAAAGTTTATTTTTCTTTCGGTG
AAAAATCTTAAAATTTGATGCTTTATCAGCTCCAAAATGTTTCAACTTTC
GCCGGTCATCGTACAGTTTCGCCGAAGATTCAGTCATTTTTCATCTTCCC
AAAGAGGAAGAATCTTCCCAATCAGGAAGAAAAAATTCACCTAAGTTCTT
CCTGTTCGGGAAGTTTCTTCCCATTTCGGAAGAATCTTCCCGATCGGGTT
AGTGGTACAGACTGTAACAGATGTTATTTTAACGTCATGGTTTTGTTAGT
ATTTTTAATTAACCTGGCGTAAAACAACCGAAGTCCAAGCATGCATTTTC
AAAACGAAAGAAGATGCTGTCATGACTGGTCGCAGCTACAGAGCATATGG
AGAAGATCTACCACTCCAAGACTCTGAGTATGCCGATGACACTGCTCTCT
TATTTAACAGTCGAAAAGAAGCAGAGTCCGGCATTGAGGAGAGTATGTCG
CATCTCGCTCGTTTTGGGATGGAAGTACATTCTGGTCCATTGGAGCCACG
AGAAGACTCCAAATCAGTTGTTCTCTTCTGTCCAAAGCCACCGAGTAAAT
ATGAAAATCCGGAAACATATGATAACCTTGACCTGTCTGATATCATCATT
GGCCAGCGTTACATTCCTATCGTTGATAAGTTCGTTTATTTAGGGAGTAT
GATTAGCAACGACTGCTCCGACAAAGGTGACGTTCAAATGAGGATCCAGA
AAGCAAGCATCGCATTTGGTTCTCTTAAGAAATGTATTTTCTCAAATTCA
AGTGTCAATTTTGATGTCAAAGGAAAAGTTTACTCTACCTATGTTATTCC
AATTCTATTGTATGGTGTCGAATGTTGGAGCTTAACCGAGAGTTTGTTAA
CGAGTTTACGAAATTTTCATCATCGTTGCGTTCGAATCATGTGTCACGTC
AATCGATACCAGTCATGGGTAAAGAGAATTAGTAACGTTGAGCTTTTGAA
TAAAGTTTGTTTGAATTCGATTGATAGCTATCTCTGTCAACGTCAAATGG
CATGGGCTGGCCACGTATTCGAATGCCCTGGTTTCGTTTACCAAGAAAAA
TGATTTCTTGCTGGGTCCGCTCGAAGCGCCCTAAAGGGGCCCCTCGCTAT
ACGTTTGGTCGATCTTTGTTCAAAACTTTCAAAAAATGTAACGTTGATAA
GTCATGTTGGCATGTTCTTGCTTCTGATAGATTTCAATGGAGAAATCTCA
TTAATAATTTGAATATATAGCTAGACTTTTATTTCTTCTAGTATTTTCTT
ATATATGACAATTTTCTGATAATTTTTTTAGGATGTGTTTGCGCTGTGAT
TCTCTTGACTATTTTCAGGAGGCCTATTCCCTTTAGGGAAGGCCTATGCT
CTTCTTCTTCTTCTTCTTCTTTAATCAAAATCAGTTTGTTAATATTACCA
ACCCTTGTTCCTTATCTTTCTTTCCAGCTTGATATGTGCAGTTTCGTATA
CTTCACCAAATGGTGAGAAGCTGTTCATGAGAAGGTTCTACAAGTTTCAG
GTAACTAAGCAGAAGTTTGCAAGAAATTCGGCGGTACACACAATCTTACT
GTTTACAAAATGCACGCAAATCAAGGACCATGAAAAATGTTGTGGTTTTA
GGGCTATTAGAATGAAATGAATTGGATTTTGTGTATTAATCCAAAATTAA
TTGTAACATTTATGATTGTTTATTACTTTATAGGTGTTGAAACCTCTTGA
AGTGAAAACTAAATTCTACAACGGAGAGGTATCTTATTCTTTTAAATCCA
TTACGTAATGTTTGTAAAATCTGTAAACAATCTTGAAATAACTTTTATCT
TCGTAATAATCTGATTTCGTTACACTATTCACTTATTGACTAGCATTATC
GTTCAATTTTGGTTGTGCTCTGGGCATACCCAAGTAAAGCAGTGGAAATG
AAATGACTGAACCTCTGATTCTCTGGACTTGCCCTTTATTGAGTGCAACA
TCACTATGATTTTCTAAAAGGCAGAATGTAGAGATAATAAAGAACTTACT
ACTTATTGTTTTCTTTTTTTCGTCATGTTGGTGCAATCTCCAGATAATGA
AAAATTTTGTATATTTTATACTAGAATATTCAGAAAATTACCTAAAACGC
TTTTTGGCTTCGTTCCACAATCAATATCATGCACACTATGAAAAATCATT
GTATTTCTTTCATCATATTTTGCAGTTCGATTCCGTTTTCTTGGAAGCAC
AAGTGCAAAACATCACCACCAACCCAATCAGTATGGATCACGTCACCTTA
GACCCGTCACAGTACTACATGGTCCTCCCATTGAACGAATTAACGCCTGT
GGGCGAGGAAACAATGGAAAAGGGCGTCGATGAAATTTTTGATTCAACTT
ATATTAACCCAATGGACATGCGACAATATTTGTATAAATTGATACCGAAA
GAGTCCCATAAATTAGAGTTGCGTGCAATGGTATGTAAGAATTGTTTTCT
GTCTCCCGCTGCAAAACTGTTTCATTTATCCTATCTTATCTCATACTGTT
AGGCCGAACTATGCAGGTTTCTTTTTGGACCTACCTCCGGGTACCCCGGT
GGAGGTCCTTTAAATTAACCCATGTCCGTTCGTTCGTTCGTTCGTTCGTT
CGTCTGTTGCCAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTCTGATTT
TTTGCACACTGATGCAAAATGACAATACCTAAAATGTGACGGAGCCCGAT
TTTCGAAAAACATTTTTTTCCGGCCGAAAATGCCGGAAAAACTGGTTTTT
TGGCATTTTCTCGAGATTTTATCATAAGCATTTTCTGATTTTTTGCTGAA
AGATGCGTATTAACAATGCCCAAAACATGGCCGAGTCCGATTTTTGAGAA
AAAATTTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAATCGCCGTTT
TTCTGGATTTTCATTGGACTTTTTCCTTATAATTGGTTGTTTTTTCATTC
AAAATTATTATCAATAGCAATTCCCACCATCAAGCATGTTTCAATTTATT
TAATAAAATTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTTTTTAT
GAAATTTTGCACACTGATGCAAAATGACAATACCTAAAATGTGACGGAGC
CCGATTTTCGAAAAACATTTTTTTCCGGCCGAAAATGCCGGAAAAACTGG
TTTTTTGGCATTTTCTCGAGATTTTATCATAAGCATTTTCTGATTTTTGC
ACAAAGATGCGTATTAACAATGCCCAAAACATGGCTGAGATTTTTTCCGG
CCGAAAAAGCTGGAAATTTCCGTTTTTGCAGATTTTCATTGGATTTTTTC
GTTTCGTGTCTTTTCAAACAAAAACATCATTTATAAGAATGTCCACGATT
AAGCATGGTTCAATTTTCAATGAAACTGATTTTGGTACAGGAACTTTCTA
AAAATCGCCCGAACAGCCGAGAATCGCCGGATTCCATGAATTTCTCGAGT
TCTCTCGTATTATTCTGCATTTTCATACTATTGTTCTCTTATTACATCAA
TCTTCAGGTAGGTCCATTCAGCATGTAGCTTGTTCCTTTTTTTTTAATTT
AGTTATGTATATCTTTCCATAACTATTCCACGGTTGCAATGTAAATCAGC
GCCATTGACCGTTTCACATCGGTACAAAATCTTGAAAAAATTAGCATCAC
ATTACTAACGGGAAGTTATTATGAAAGCAAAATCAATCTTGATAACCTAT
GATCCATTTTGACCGAGAACTAGCTTTTGTTGGTTGTAGCAAATTGTAAA
CAGTTAATTACGCATCAAGGTATTTTCTAAACTGTTTATTGACAATTCAG
CCAATGTCACCGATCGGGAAATTAGATATCGTATGGCGAACAAACTTTGG
TGAGATTGGACGACTTCAAACAAGTCAACTGCAAAGAACGGTATGGGTTA
TTCGTACGATTTGAGAGAATCCTTCTACCATGAGAAAAATAGCAACTTTT
AAACCATGTCATAGCAAATTAATTACTGTCATGAAAGTGGAAATTCTTTT
GAGTGCCTGCTTGAATAAAAAGTGCAAAAATTCCAGATCAGAAAATAATT
CTTTATATTAAAGATTGATAAAGTAATTCTGCGGCCGCAATCGGAGACGA
CTCGATAGCTATATACCAGAAGGTAGGGTAGGCCCATTGATTGCTCCACT
TACCCTTGATTCTTCTCTTAATTGCTGAGCATCAAGCAGAGAGGCATCAA
GTACTATTTTGGGCTAAAGATCTATCGACGTTTGAATTTACCAGCACTAC
CCGTCCATCTATCAACTCGATCCTAAAAACCTTTTTTTCTATCGTTTCCA
GGCTCCAACAGATGTGGATATCAAACTAGTTGTTGAAGAATCACCCGATA
CCATCTCAGTTGAGCAACAGTTCGAAATAGCTTGCAAACTCAAAAACTTT
GGGTAATTGTCTTCTTTCATCAATTATTCTTAACGTTTGATTCGTTGCAT
TGGACCGAGTTTTTATTACTTTTAAATCACCTGGTTCGATAGTACTCCTT
TTTTAAACCCGCTGTTGGTAGATTCTCCATGTATCTCACGTCCTTAAGAA
TAGCTTTTCGTGATTTTTTTGTGTTGTGAAATAATGTCACCATTTTCTTA
GTTCATCAAAGATGGAAGCTAAATTATTCTTGACCAGCTCGAGTAGTTCC
TTGCTTTGGTGTGGAATCTCCGGAAAAGTAAGTTTTTCCTCTTTTTTAGC
CATGTCTTATAACTTTTTGCATATTTTTTTGGATACGTTACCCTTTAACC
TGGAATTTCAGAGTAAGGTAAATTCAAAGTAAAGGTGTTGCTAGTTGTTT
CTTAGATTTCATTGATATGACAATGTAACATCATATTTAATCTATTTGTT
AGGTTTTGGGTCCACTTCCACCTAATTCTTCACTTGAATTCAAATTACAT
GGTATTGCTACACGTCCTGGATTACATGTAAGTTGTTCAGGGTACACACT
TTATCAAAAAGTTCTTGGTGAACAGTTAGTAGTAGAGTAGAGAGGCCCCA
AAAAGGATAGGTAATGTGAAAATGTTTTCCATCCAGCAGGAAGTGTCACA
CTAACACCTTGATATCCCTGTATGAATATTAAACAACTTTTGTTCCTGCT
CCCAAGCCTCCACCAGGGCTGGTGAACGTGGTGGAACGAGAGTAAAGAGC
TGAAGTGATTTCAAATTGCTAACCATTGTAGAGAATAAAATCTACTGCAG
TTCACCCAAAAAGAAAGGTCTGATAGTACCTTTGAGAATTTATAGAAAGA
AAGGGCTTATGGATTCAAAAGTTCTCCCCTTCTTAGCAAAAAGGTCGTCT
TTTTCAATAATTTGGTCTTAGATTTTAGTAACCCCTTAAAATTCAGCTCC
TTTCTCAGATTTCATCTTTTCTTCTCTTAGAGTATTGGAGGAGTGCGTAT
ATTGGACATGAACAGTACAAAAATGCATGATTTTGATGATATTTGTCAAT
TACTTGTCTACACCAACGAACAATCGCCCTTTCTATAG Coding sequence (CDS) from alignment at sc0000159_pilon:109153..117290- >XLOC_014798 ID=XLOC_014798|Name=XLOC_014798|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2496bp|location=Sequence derived from alignment at sc0000159_pilon:109153..117290- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGAAGGGTATCGAGAGAAAGAGCATCTGCTCTCGCTTAAAGATGC
AAGAAGGGTATCGAGAGAAAGAGCATCTGCTCTCGCTTAAAGTGATGAGA
TTGACAAAACCATCAGTCAAACCACTGCTGCATGTCACCAATGAACCACA
AGATTTACCAGTGATGAGATTGACAAAACCATCAGTCAAACCACTGCTGC
ATGTCACCAATGAACCACAAGATTTACCAGGAGATATCTTCAACAATTCA
ATTTTCACTGACGTGGCAACTACCAAAGGTGCTGAGATGCTTAATTGTGG
TGAATTGCTCTCCCTCCCGCAAGCCTTCGGGAGATATCTTCAACAATTCA
ATTTTCACTGACGTGGCAACTACCAAAGGTGCTGAGATGCTTAATTGTGG
TGAATTGCTCTCCCTCCCGCAAGCCTTCGGGAGTATTTACCTTGGAGAGA
CATTTTCTTGCTATGTCAGTATTTTGAACGACAGCAACCAAGTCACCAAA
GATGTCACACTAAAGGAGTATTTACCTTGGAGAGACATTTTCTTGCTATG
TCAGTATTTTGAACGACAGCAACCAAGTCACCAAAGATGTCACACTAAAG
ACGGACATTCAAACATCTTCACAACGATTCCAACTAACAGCCAGCACACC
ACGTGACCTTCTTTCTCCTGATGAAAGCCAAGATGAAGTGTTGAGTTATG
AAGTCAAAGAACTTGGCACTCATATACGGACATTCAAACATCTTCACAAC
GATTCCAACTAACAGCCAGCACACCACGTGACCTTCTTTCTCCTGATGAA
AGCCAAGATGAAGTGTTGAGTTATGAAGTCAAAGAACTTGGCACTCATAT
CTTGATATGTGCAGTTTCGTATACTTCACCAAATGGTGAGAAGCTGTTCA
TGAGAAGGTTCTACAAGTTTCAGCTTGATATGTGCAGTTTCGTATACTTC
ACCAAATGGTGAGAAGCTGTTCATGAGAAGGTTCTACAAGTTTCAGGTGT
TGAAACCTCTTGAAGTGAAAACTAAATTCTACAACGGAGAGGTGTTGAAA
CCTCTTGAAGTGAAAACTAAATTCTACAACGGAGAGTTCGATTCCGTTTT
CTTGGAAGCACAAGTGCAAAACATCACCACCAACCCAATCAGTATGGATC
ACGTCACCTTAGACCCGTCACAGTACTACATGGTCCTCCCATTGAACGAA
TTAACGCCTGTGGGCGAGGAAACAATGGAAAAGGGCGTCGATGAAATTTT
TGATTCAACTTATATTAACCCAATGGACATGCGACAATATTTGTATAAAT
TGATACCGAAAGAGTCCCATAAATTAGAGTTGCGTGCAATGTTCGATTCC
GTTTTCTTGGAAGCACAAGTGCAAAACATCACCACCAACCCAATCAGTAT
GGATCACGTCACCTTAGACCCGTCACAGTACTACATGGTCCTCCCATTGA
ACGAATTAACGCCTGTGGGCGAGGAAACAATGGAAAAGGGCGTCGATGAA
ATTTTTGATTCAACTTATATTAACCCAATGGACATGCGACAATATTTGTA
TAAATTGATACCGAAAGAGTCCCATAAATTAGAGTTGCGTGCAATGCCAA
TGTCACCGATCGGGAAATTAGATATCGTATGGCGAACAAACTTTGGTGAG
ATTGGACGACTTCAAACAAGTCAACTGCAAAGAACGCCAATGTCACCGAT
CGGGAAATTAGATATCGTATGGCGAACAAACTTTGGTGAGATTGGACGAC
TTCAAACAAGTCAACTGCAAAGAACGGCTCCAACAGATGTGGATATCAAA
CTAGTTGTTGAAGAATCACCCGATACCATCTCAGTTGAGCAACAGTTCGA
AATAGCTTGCAAACTCAAAAACTTTGGGCTCCAACAGATGTGGATATCAA
ACTAGTTGTTGAAGAATCACCCGATACCATCTCAGTTGAGCAACAGTTCG
AAATAGCTTGCAAACTCAAAAACTTTGGTTCATCAAAGATGGAAGCTAAA
TTATTCTTGACCAGCTCGAGTAGTTCCTTGCTTTGGTGTGGAATCTCCGG
AAAATTCATCAAAGATGGAAGCTAAATTATTCTTGACCAGCTCGAGTAGT
TCCTTGCTTTGGTGTGGAATCTCCGGAAAAGTTTTGGGTCCACTTCCACC
TAATTCTTCACTTGAATTCAAATTACATGGTATTGCTACACGTCCTGGAT
TACATGTTTTGGGTCCACTTCCACCTAATTCTTCACTTGAATTCAAATTA
CATGGTATTGCTACACGTCCTGGATTACATAGTATTGGAGGAGTGCGTAT
ATTGGACATGAACAGTACAAAAATGCATGATTTTGATGATATTTGTCAAT
TACTTGTCTACACCAACGAACAATCGCCCTTTCTATAGAGTATTGGAGGA
GTGCGTATATTGGACATGAACAGTACAAAAATGCATGATTTTGATGATAT
TTGTCAATTACTTGTCTACACCAACGAACAATCGCCCTTTCTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:109153..117290 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1141-1248:109 |
| Aaloc | 1066-1140:637 |
| Aaloc | 991-1065:887 |
| Aaloc | 889-987:1188 |
| Aaloc | 799-888:1689 |
| Aaloc | 544-798:3314 |
| Aaloc | 499-543:3806 |
| Aaloc | 427-498:4061 |
| Aaloc | 301-423:6242 |
| Aaloc | 217-300:7067 |
| Aaloc | 118-213:7453 |
| Aaloc | 49-114:7942 |
| Aaloc | 1-45:8139 |
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