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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:93656..98924- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014796 ID=XLOC_014796|Name=XLOC_014796|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5269bp|location=Sequence derived from alignment at sc0000159_pilon:93656..98924- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGCAGAAAGAATTAAAAAAAAAATGGTAGTCACAATCTCCATCAGAAA
TTTTCTTCGAGCACAGGTAAAAATTTATTTCAAGTAGTTTTTCAACAAAA
AGGCTGTTTTTGTAACTTTTTGAGTACAAAAGTTTAGCAGAGTTATTGTT
AACCACACTTTTACTTTTTGAAAGACAGTAAAAAATGTCTACAATATACA
ACTGTTAAGAGTAAGTTTTCATAATATTCTTATTTTTCAGAAATTAAACA
AAGTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGA
GTAAGTTTTTTTTAACATTCTGTTGTTTTTTTATTTTGTGTAAAATTCCA
ATTGTACATAAAACAACTATCTCTAAATGTAACTTAGAAGTTAGTGTAAT
CAATTTCTTTATAACATTATTATCTATATTTTTAAAGTACAATGACTTGA
AAATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAAA
CTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGAC
CATTGACAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTAG
CAATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGAGGTTTGAACT
TCTTCTTTTTCTAGTCGCAGTCATTTGTTCTTCTGAACAAAAACTGAATT
CCAAAAAGTCATGTAGGTTAAATTATAGAATGCCTGTGGGTTGAAGGTTT
ATAAAAAACAGTAAGAACAAAAACGTAAGACGGAAATTTTTCCCGAAAAT
TTTCCCCTACATCCAATAAGATGATCTCAATTCGTTTTCTAAAAGATTTG
TATTCAAATAATTGGTAGTTACAATATTATATTACATTTCATTTTTAGGT
ATTTGAGGGTATGAAAGCATATAAATGTACCGATGGATCAATACAACTTT
TTCGACCAGAAGAAAATATGAAACGACTATTTGCTTCAGCTGAAAGGCTA
AGTTTACCTGTAAGTTTTGCACCAGATAGCAAACTTAAATAACGAGTCTT
AAAAAGTACAAAAAAAATTAAGGTTTTATTTTTCCCCTATCTGGGAAAGG
TTCAACATCTGCTTCTAAGGCCTTACTGGATTGATCCTAACCAATTTTTT
GAAGGTGGCTTTTTTTTTTAGACATTTGACAAAGAAGAAGTTTTGAAGTG
CATTGCAGAACTGGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACA
GCAGTTCATTATATATTCGACCAACGATTATAAGTACAGAGGTATTGTTC
CTATCTGTGACTGCTTAAAATTTTTGTCATCATTGATTGTTAGTAAGTTG
AAATGAAGTCTCAAAATGCCGTAAGAGTCAAAATCTTACAGTGAATAACT
GCCTTGTAGAAAATGTTTGCTCCTACAAAACACTTGGGCACTGTATCTGT
CGACTTTTTCCCTTCTACTGTTTAAGCCTTCTCCATTGGTGGTAAGCCAC
CAGATAGTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTATTAC
GACACAGGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTTTCGT
CAGAGCATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGGTATATAT
TTCTACATGTGTCCATGATTTGATCAATCTATTGGGAGAATCCTTTTATT
TGTGTGTATTTTGTTGTTAAAATTGTAAGGGAAAATACTGTAGGGAAAAA
GTGAAATTTCTTTGTGGTACCTGTGTTGAAAATTATTTATTCTTGTCGTC
ATCCATAATTAAGATTTTATTCTCTTTAGAAACTACGGCCCAACGATATA
CGCGCAAAAATTGGCTCAAGCAAGGGGCTGCTCTCAATGCTTATGGCTAT
ACAAAGACCAAGTCACTGAAGTTGGAACCATGAATTTCTTCATGTTCTGG
GTCAACGAACAAGGAGGTAAGTCTTAAAAAATGGTTCGAGATTGAAGAGT
TTCATAGATTTTTACCACAACTTAGTTTCGATTGTCTAACACTCACGTTT
GATAATATATACTATCAAAATGGCATTTCTTTCTTCCAAATTGCATAACT
TGTGACCTATATTAATCACTGTTATGATTAAATCTCTATGCTGTGGTTAA
GACTTCTATCTTAGTCAGTGAATCTTTTGTAATCGTTTTTAACAGTTTTA
AAAGATATCCCTGTTATTTTTTACCTTCTATAGGTAGAATTGGTATTATG
TAACGTAGCACCCCTGCAGTTCACTTCTCCTACTTCATCTAGGCTTCTTA
TTTCCTCAGTTAGCTGTGCATCAAAATGTGCAAAGGATTTAAGAAAAATT
CCTTCCTCCCTCAGTTGCTACTTCCTTGTTCAATACAATGCTGAATTTCC
TTGTTTGCCTTCGAGATGATTTCGATAATCTGTTATTTTACTTTCAGAAC
AAGAGCTGGTCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCACG
CGAAAATCACTCCTCGACCTAGCACGAGAATGGGTAAATAACTGAAATTC
CTTTCAAACTCCAAGACCTAATTACGATTACTCAGGGTGATCGTTCGATA
GAAATGTAATGTCATTAGACATCGAATAGCTTCCTTGCGGTATCACTTAC
ATATTTTTCCTTCTATGAATTTTCTCTTGTCGTGGTTAAAGTGAAGTTGC
ATAATGATTGTTTGACTTGCCCACATGGCACATTATCATGATCGATTTAT
CTCATGAATTTTGAAACATGACCTCGTGAATTACAAATCCACTTTTAAAC
ATCCTCTTATTATCTTTCTGTGTTATCTTTTTTTATAAGATCAAGGTTTC
TTCTAATTTCTTGTAACTCACGGTTTTTTAGATGATAAAGCCAAGCTGAC
TGATAATCCCCTAAATACACAAATATCCAAAGTTTCCGCCCCTTTTTGAC
CTTGTAGAGCAGTCTATTTATCCTGAAACTCATAAGATAAGATTTATGTT
TTGTGTTTTGCATAAAATGCCTAATATTCTGCTTTGAAAACGATTTGCTG
TCACTAGAAATGGGAAACTCTCAATGAATATACTATGTAATAAGTGCCTT
TTTATGGAAAAACAAAACAAGCATCATAACTGTGAAACAAAAATAAACAT
TTTAAGAACTTCTCAACAACTATCAGAAAAACTTATTTTGATATAATGTA
ACATACAATTTAAAACACACACACCTCCTTTTGACGTCAATGCAACCTGA
CACTGCAATAATTTGTTTTTTGTTGATTATTGCTTTTCTCGTAATGCAGC
GTCACATTGTCGCATCGGAAAGATAGAAATTGAACTGTTTGACATAAAAC
GATTTTCATCACGCCCCCGTTTTAAAAAAATCCTGAAAAGTCTTTTTTAA
AGCGATTGACATGCAGCTTTATGGAATTTTTAACTGGTGATGTTTTGTCA
GTTTGCATATGATGAGTCATAACAATAGTTTACTGAGAGTTTAACCTGTA
GCTTGAAGCCTGAAGACCTTTAGAATAGCAGAATGACAGATTGTTTATAA
TCTTCTTCGGTCCCATATTGATGTTTACGTTTTTACTCTACTTAGGATGA
ATTCAAAGTCTCCGAAAGGGATTTCACTTTACAAGAGGTCGCCAAGGCTG
CGTCAGAAGGACGAGTATGTATATCTATTTTGTTGACAATTGCTTTGGTC
AAGTACTCAAAAATAAGCGACCCTTAGGGCCAATTCCTCTACTTTCCGAC
TAACAATATAGGTACTTTCTATGTGAGACAATGTGGATTATGAGGATCAG
GGTCATTTGAAACGACTTTTTCTAAGAGTTAAATTTTATTTATCGTCGAA
TTCTGTGTTTCTTTTTGAGCCTATGCAGGCCTATGTTGTCTATTCGACGT
TCTATGTCCCTTTTGCTATAAACCATTTTAGGTTGGTAGGAAGATTTCGT
GGACATCTTTATTTTTGATAGCGCTCGTATATGTAATATCCCATAAGTTT
TTTCTATTTGAGAAACAAGAGAAATTAGAATTATTTTTTTATCGTAAGAG
ATAAGAAAAACCTCAAGTCAAAAAGGTTTAAAGTGGAAGATTGAAAAGGT
AGAATTTTACAAAACATCTCTTCTATTTTTAGGTGAAAGAAATTTTCGGT
GCTGGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGA
TGACGTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCT
TTGATGAGTTGACGAGCATACAGGTAAGATTGTTTTAGGTTTGTGTTTTT
AAGCCACAAAGGGCGAAGCTCTCGCCCTTAAAGCATTGTTTGCTCCACTT
AGAACGCAAAATAAAGCTTTCATTAAAGGTCTTAAATACTCAAAATTACT
AATTTTTTGGTGTCCAGGGTTGTCATAGTTTAAAGACGAAAAGAGTTATG
AAGCTTAAAACTTGCAGATACGTCAAAGCTTAATTTAGTTATTGTTAAGT
CCTGTTGAATACGAAGTTAGATATAGCATAAATAGCTGAGGCTTATCTTA
TATCAGACTTGCATAAAAATAACGTTTTTTTGCACACTCATTATAATGCT
ATCACGTGAAAGATCTTCCCAGTAGTTTAACTAAGATTATAGTTAGAGAC
GCTGGATGAAACTGCTGCAAAAAAGAGGCAAGAATATTTTGTGTTATTAT
TTAGTTAGTTTAGTGTGGTATCGTCAAGTTATATATTGGACGATGAAAAA
AAGGATCTGAGGCCGTCTATGTATATGGTGTTGTTTTTGTATATTTCTTA
AAAATCTAGTTGCTTGTATATAGTTGCTATCAGCTTTATTGTGGGCTGAG
AAGGCTGTCCTTCATTCGATAAGAAGATATCTTGCTTTGAAATCAACCGA
ATCAACTGAACTTCCATTATGATTAAAAAAAGTTTTATAGCTTTAGCTAT
TCCTCAGGTATTCAGACTCGGACACAGACAGCAGCCATTTTTCCCTTCAG
AGCATGTATTCATTTTTGAAACCAATCCTATAAAAAATCATCAAAAACAT
GAAATCATAAATAAGTATTAAAAACATGATAGTACCGATAGCTTCAAAGA
TTTTATAAAGAAGGTTGCAGATATTTTTTTCTTGGTCAAGGCTCTCCAAT
AAAATCATGGTGACTTTGATTTTTCATTTTTCACTTTGCAGTACGGACGA
ACACCTCACCCATGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAA
ACAACCTAACCTCCAGTAA Coding sequence (CDS) from alignment at sc0000159_pilon:93656..98924- >XLOC_014796 ID=XLOC_014796|Name=XLOC_014796|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2476bp|location=Sequence derived from alignment at sc0000159_pilon:93656..98924- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGCAGAAAGAATTAAAAAAAAAATGGTAGTCACAATCTCCATCAGAAA
TTTTCTTCGAGCACAGTTAGCAGAAAGAATTAAAAAAAAAATGGTAGTCA
CAATCTCCATCAGAAATTTTCTTCGAGCACAGAAATTAAACAAAGTCAAA
GGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGAAAATTAAA
CAAAGTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCA
GATACAATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCA
TCTGCAGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCT
TGTTGCAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATTGTTC
CATATGGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGC
ATTGAGTACAATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAA
GCCATCTGCAGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACA
TGCTTGTTGCAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATT
GTTCCATATGGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTA
TGGCATTGAGGTATTTGAGGGTATGAAAGCATATAAATGTACCGATGGAT
CAATACAACTTTTTCGACCAGAAGAAAATATGAAACGACTATTTGCTTCA
GCTGAAAGGCTAAGTTTACCTGTATTTGAGGGTATGAAAGCATATAAATG
TACCGATGGATCAATACAACTTTTTCGACCAGAAGAAAATATGAAACGAC
TATTTGCTTCAGCTGAAAGGCTAAGTTTACCTACATTTGACAAAGAAGAA
GTTTTGAAGTGCATTGCAGAACTGGTGCGTGTTGATCAAGACTGGATCCC
AGATTGTGACAGCAGTTCATTATATATTCGACCAACGATTATAAGTACAG
AGACATTTGACAAAGAAGAAGTTTTGAAGTGCATTGCAGAACTGGTGCGT
GTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTTCATTATATATTCG
ACCAACGATTATAAGTACAGAGCCTTCTCCATTGGTGGTAAGCCACCAGA
TAGTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTATTACGACA
CAGGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTTTCGTCAGA
GCATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGCCTTCTCCATTG
GTGGTAAGCCACCAGATAGTGCAATGTTGTTCGTCATCACAGGTCCAGTT
GGGTCTTATTACGACACAGGAAGTTTCCAACCCATCTCACTTTTAGCAGA
CCCAAGTTTCGTCAGAGCATGGCCTGGTGGTATTGGAGATTGCAAAGCTG
GAGGAAACTACGGCCCAACGATATACGCGCAAAAATTGGCTCAAGCAAGG
GGCTGCTCTCAATGCTTATGGCTATACAAAGACCAAGTCACTGAAGTTGG
AACCATGAATTTCTTCATGTTCTGGGTCAACGAACAAGGAGAAACTACGG
CCCAACGATATACGCGCAAAAATTGGCTCAAGCAAGGGGCTGCTCTCAAT
GCTTATGGCTATACAAAGACCAAGTCACTGAAGTTGGAACCATGAATTTC
TTCATGTTCTGGGTCAACGAACAAGGAGAACAAGAGCTGGTCACGCCACC
CCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAATCACTCCTCGACC
TAGCACGAGAATGGAACAAGAGCTGGTCACGCCACCCCTTAATGGCCTGA
TTTTACCAGGAATCACGCGAAAATCACTCCTCGACCTAGCACGAGAATGG
GATGAATTCAAAGTCTCCGAAAGGGATTTCACTTTACAAGAGGTCGCCAA
GGCTGCGTCAGAAGGACGAGATGAATTCAAAGTCTCCGAAAGGGATTTCA
CTTTACAAGAGGTCGCCAAGGCTGCGTCAGAAGGACGAGTGAAAGAAATT
TTCGGTGCTGGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTA
TCTTGATGACGTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAAC
GTTTCTTTGATGAGTTGACGAGCATACAGGTGAAAGAAATTTTCGGTGCT
GGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGATGA
CGTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCTTTG
ATGAGTTGACGAGCATACAGTACGGACGAACACCTCACCCATGGAATTAT
CTGGTTGACTCGCAACAACTTCGACAAAAACAACCTAACCTCCAGTAATA
CGGACGAACACCTCACCCATGGAATTATCTGGTTGACTCGCAACAACTTC
GACAAAAACAACCTAACCTCCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:93656..98924 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1159-1236:79 |
| Aaloc | 1018-1158:1138 |
| Aaloc | 949-1017:1675 |
| Aaloc | 865-948:2821 |
| Aaloc | 727-861:3440 |
| Aaloc | 565-723:3789 |
| Aaloc | 562-564:3794 |
| Aaloc | 442-561:4099 |
| Aaloc | 331-441:4372 |
| Aaloc | 127-330:4833 |
| Aaloc | 67-126:5030 |
| Aaloc | 1-66:5270 |
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