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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000336_pilon:327107..332232- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014792 ID=XLOC_014792|Name=XLOC_014792|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5126bp|location=Sequence derived from alignment at sc0000336_pilon:327107..332232- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAACAGAAAGTGAACATACGAGGATAAATGGTATCCCTCATTATGA
GGTGACTGTAAAGGACGATTGTCTCGATGACCTTTCTAAACAATTGTTAA
ATCAAATCAAAAATGGATGGAAAATAGAGGGAAAATTGAATTACAGTGAA
GGAACTACAAATGATTTATATGGATTCCGTATAAAAAAAGACCAGCAAAA
CGAAATTGTACTATTTCGTATATATGGTGCAAAAACTGAACTCATGATTG
ACCGGGAATTAGAATTAGTTAGTTTTATGTTACTATCTAAGAATGGTTTA
GCTACAAATTTATATTGTACCTTTGAGAACGGTTTTTGTTACCAATATCA
ACAAGGAAGAACGCTGACACCAATAGATTTGACAGAAGAGTTATTTTTAA
AGAAAACAGCTGAACTAGTAGCACGGTTGCATTCGTTAGATTATTCCAAT
GTTTCTGGTAAAAAACTATTTGAATCTAACAGAGGAGATGCATTTTCAGA
TATTGACCGTTACATGAATTTACTGAAGATCAATGGTAATGATGATGTGA
ACAGCGTTAGCACTGACAATTGCTTTCACTTATTTCCGAATTCACCGTAA
GTGTTTACTTTCTAGAATCCTTCTAATTCAAAAAGTTCAAAAAAGACAAT
ATACCAATTCAAATATTTAAAGGTTTTATTTTTACATAAGTGTCCCCGTT
TCATATCAGACATATATTTCTACCATCTATTGTCTACCTATTGTTATATT
ATGCTGATATAAGCAAAAAAAATGTTTATTTTTCCCTCTTTCTGACCAAG
CACACTATGAAACCTTTTTAAAGTGGCATTGAAAAAAATTCCATTCAAGC
ATCTAATCAAACCCTTCGACCTCTAACTTTACTAATCAAATATTTCGATG
TAACAACCATCACTGACACTTATTTGAGCAACACAATAAATGTGCAACTT
AAAAAGATGACAGAGATAGTAAAGAGCTCCCAGACATTCTAATCTTACTA
AATACTAGTAGTGTTGGTGATTTTGGAAAGTCTGTTTTTCTCTTCCTGCT
TTTGTAAATATTTATCGTATTCATCATGCAATTTTTAGCAATTTCCATCC
GAATTATTAAAGTGGCAAAAAGTGTCTTATCGACTGTGAAGTTGGTCATT
TTGGCCTTTTTAGGCCTACTTCAAAGGACTGTAACTTTTTATCCAAGAAA
GATACGAAAAATCTGAACAAATATTTGAAATCAGCAAGGTTTAAATTTTC
AAAATAGCTTGATGCCATTATTCTTAAAACAGTAGACAAAATCTTCATTT
TTTTTCATCCTTTTTCTCGTTTTTCTTCTTCATTTTTCATATTAAAAAAA
ACGAGATAAGCGTTGCTCGTGGCGTAATTAATGAAAAGGTCTGTTCTCCT
TTCACTGTTTTATTTGTTTTCAGATCTTTAACAGGAATCAATCTACAAGC
AATCGAAGCAGAGATCAAAGAACTGAAGGAAAAAGTTGCTGCTTTTGAAG
AACAACCAGAAAGAACGTATTGTCATAATGATATCAATTGCCCAAATCTC
ATCTACGATGGGGATAAAGGTATTGCATTGGTTTTATTCAACACTTACCA
GACACTTTTCGTGAGATAAATTCACGTTGCTTTCCAGTTAGGTTGCGCCA
CCTTTACATAAATTACGTCAGGAACATCACTTGCCTCGTTTTGAAATTAT
TTTGATTTTCTGAAGACCTTTGAGCTATGATATTTACACCTTTGAAACCC
TTGAAATTCAGAAACCTGGAAGGGATTTTTGGACTTTTTAAATGCTAAAT
TTTCCCCACTTCCTGAGGAGTAAAGTAAAAAGAGCCTAAAAGTCAAATGA
AGAAATTGAAGCTACAAAGAAGTCTCGATCGTTTTAGACAGTGGCGTGGT
AGTTTTTTATAAGCAATTTATGAAAAATAGCAAAAATTTGACATATTTTG
AAATGGCTGTAGCTCTTGATGTAAAAAAGATATTCAAGTTTTGTTTCAAT
ACTCTGAAATCAGATTTTCAATAATTATCAAATTATGATGCTGTGCAGTG
CACCAAAACTGTTAAAAGTGATTATTTCGAAATTCGCTCCTAATTATGAA
AATATGACGTCATTACGTCAACTTTTTTTGGAAAATTTTCCTTTTGCCAA
TGTCAACATATAGTGAAAATTTCAGAGTGATTTCTTTATTAGATAAAAAA
TATTGAAATTTGTAGATTTTATGAAAATCAAGCCTTTTTGCTTAAAACAT
TTGGTCATTTTTGAAAAGTGCTGACGTCATCAAATTTAGTACTGGTTTAA
AAAAAAATTTCTTTGGAAAATGAAGTAATATAAAAATTGGGAAAGGTTCT
GAAATTTCACGACAATTAGTCTCAAAGTCATAAACCTCCAGGAAAAAATC
TGTCACGGGGATGTTTTGTACACCAGATTTTGCTCGGCAACTCCAGAAAG
TTTTTCCCGACACACCACTGGACGTTTAGTAGAAGCTTGAGAAATATTTT
GAAGTTGAAATATTTTGAGCAATTGCGAATATGCAATATGTGAAATAAGT
TGATTGAAATATTTTAGAATGGTGCTGTGAGAGGCATTTATCAATATCTT
TGAAATGTTTTCTTTAACCCTTTTTATGCATTATATTCACATAGTTATAC
TTTCAGATTTTGATTACTGCCATTTTTGAAAGCTTGAAGTTCTATATGAC
ATTTTTCAGTACTACAGCTTTTGTAGCGCTTTAAAGATATATTTTGCCTA
TAAAAAGACTTTGAAAAATTGGAAACCTTGAAACCCCGGGGGAGGGGTAC
TTAGGCAAATGGAGGGTACGGTATGTGCCGCCCTTAAGGGTACCTATTTT
GGACTTCCAAAGTCCCGCTAAGGGTCGGAAAAATAGAAAAGTTTCAACTT
TTTACTCCCTGAAAGATCGAAATTTGATCAAAATTTGTCAACTTTGTCCA
GCTAAGAGCCTTAAAGTTCCCAAAATTGTCCTTTGTTTTCTCCTTTTTAG
TCCCGGTAAGGGTCCAAAGTTCGAAGGTCGGGCGGCATCCCCCCCGTCAG
CTCGCAACCCTAGTACCCCCCGGGCTTGAAACCCTTTAAAATTATGTTTT
CAAGACTTTCAAACCGATGAAACCCTTACAAATTTAGCCAAAAGGCCCCT
TGAAATCCTTGAAATTGGTCCTAAAATATGGGTGGCCATCATGCTGTTCT
AAACATCAGAGTAAACATCTTTTATTTTTTAGGAACCTTTCACATCATCG
ATTATGAATACTCTGGAGTCAATTACGCCGCTTACGACATAGCTAATTTC
TTCGACGAGTTCCCAGGTACTTCAGTAGTCTAGTTTCAGAAGCAAGGTTG
CAAAGCAACTCTTAGCGGGCTTTTTAATGGAAAGAGGGAAGGACACTCAG
GCAAAATTCGATAGGGAGGTGTGCTGCTGGTCAGGGTCCTGGTTTTAGGC
TCTGAAGATATCTGACAGTGTCCCAAATTTACTAAATTTCAAGATGTGTA
TCTGACAGGGTCGACATTTTTGCTATTTTGAACCACTTCCAAAGTGGAAA
TTTTTCGACTTTCGTTTTGACAGGGCCCCAAATTTACCAAACATTCATAT
CTGACAGGGTCCATTTTTCAAACTCCAGCGGCACGTCCAAATCGGCCGTC
AAGGTCAGTCCGCTTTTTTTTTTTTTTGGGGGGGGGGCGGTGTCGGCGCA
AATAGCACATAGCAAATAGCGTCCTGATCTTATTAGTGTACATCGAAAAG
TTCGGTTTGCTTCTAAAAACTTGCAAAGGACTTAATACTATCCCTTACTA
TCGCTGACACCAATGCTAGTGTGAATGCTCTCTAGAACTAGAACAAGTTT
GGATAAAAATAAAAATAGATTTTTCGATATCTCAATATCGTTAAATCATT
GTTTTTCCAGGGAACACGAACATCGACTTTTCATTATTTCCAAGTGAAGA
AACTCAGAGAAAATGGATCAAATATTACTGGATGGAAAGATTGAAGATAA
ACGGTATTCTCATAACCAAACTAAATAAAATGGGATAGTTATCTACAAAT
CTTGCCACTATACAAGTAGAGGAAAGGAGTCAGTATCAGAAGTATCAGAA
TTTAAATACGCCACATAGGGGGTGGAATTTTAAAAAGAAAATCCTAAAAA
AGTCACATAGTCAAAGACTATTTAAAAATGTTTTTGACACCAAAGAAGCG
TCGAATAAGTGTATTTCGACATACACATTTTGGTATCAAAAATTAACATA
ATAGAGTGAATATTATATCTTTCGATAGTGCGCCATCCGCGAAATTAAAG
CCTCACGAGTTTCGCATATGAGCTCAATCACGCAATTAAATCCCTGTGAA
ATTTTATCCCCTTAAAGTAAATACGGAGCTAAACGATAAAATATTGTTAA
TATTTTCGATTGTAGGGAAAGAATGGATGGAGGATGATTGCGCTTCAAAA
ACAATGAATGATTTGTTTCTTCACGTTCAAATCTTCACACTGGTTAGTGT
AACCCTTTGCGCGCGCTGTTTTTTTTTGAAAAAGTTGAAATTTTTCTAAT
TTTTTTATTTTAAAACTCAAAACTTTACAGTTCGATAAAAGATTGTAGCT
TTTGATTTAGAAGATGGTTTTGGTACCATTGGAAAGCTATTTTTGGACTC
TTTCTAAAAGCAATTTGGTTACTACCCTACAATATCTTCTTTCCGATGCC
AAAGTGAAAGGTGATGATAATGATAATATCTTTGAAGTATCCTAATCCAA
ATACCAAATCAATGACAATGTCCACAAACTTTTTGTCCCTATAGTTACTT
TTTTTTCTCACTGTTGTGTACAGGTTTCGCACATTTTGTGGGGAGTATGG
GCACTAGTCCAAGCACGTCATTTGTCCAATCCTACTGAAATGAACGGGTG
AGTCAAGTCACGCAAAAATGAATCTTTGTCTGCTAAAGATTAAGGTAGTT
GTCCATGAGGAATAATGCGATAGAGACTTAGAAGAAAAGATACCAATCTT
TTTACACAACACGAGGATTTAATAAGTTGTATCATTTTTTCTAGGTACGC
TGAAATACGTTTGGTTGAATATTTCAAACAAAAGACAACGGTGATGGACG
GTATAAGAGAAAAGACAATTGAATGA Coding sequence (CDS) from alignment at sc0000336_pilon:327107..332232- >XLOC_014792 ID=XLOC_014792|Name=XLOC_014792|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000336_pilon:327107..332232- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAACAGAAAGTGAACATACGAGGATAAATGGTATCCCTCATTATGA
GGTGACTGTAAAGGACGATTGTCTCGATGACCTTTCTAAACAATTGTTAA
ATCAAATCAAAAATGGATGGAAAATAGAGGGAAAATTGAATTACAGTGAA
GGAACTACAAATGATTTATATGGATTCCGTATAAAAAAAGACCAGCAAAA
CGAAATTGTACTATTTCGTATATATGGTGCAAAAACTGAACTCATGATTG
ACCGGGAATTAGAATTAGTTAGTTTTATGTTACTATCTAAGAATGGTTTA
GCTACAAATTTATATTGTACCTTTGAGAACGGTTTTTGTTACCAATATCA
ACAAGGAAGAACGCTGACACCAATAGATTTGACAGAAGAGTTATTTTTAA
AGAAAACAGCTGAACTAGTAGCACGGTTGCATTCGTTAGATTATTCCAAT
GTTTCTGGTAAAAAACTATTTGAATCTAACAGAGGAGATGCATTTTCAGA
TATTGACCGTTACATGAATTTACTGAAGATCAATGGTAATGATGATGTGA
ACAGCGTTAGCACTGACAATTGCTTTCACTTATTTCCGAATTCACCATGT
TAACAGAAAGTGAACATACGAGGATAAATGGTATCCCTCATTATGAGGTG
ACTGTAAAGGACGATTGTCTCGATGACCTTTCTAAACAATTGTTAAATCA
AATCAAAAATGGATGGAAAATAGAGGGAAAATTGAATTACAGTGAAGGAA
CTACAAATGATTTATATGGATTCCGTATAAAAAAAGACCAGCAAAACGAA
ATTGTACTATTTCGTATATATGGTGCAAAAACTGAACTCATGATTGACCG
GGAATTAGAATTAGTTAGTTTTATGTTACTATCTAAGAATGGTTTAGCTA
CAAATTTATATTGTACCTTTGAGAACGGTTTTTGTTACCAATATCAACAA
GGAAGAACGCTGACACCAATAGATTTGACAGAAGAGTTATTTTTAAAGAA
AACAGCTGAACTAGTAGCACGGTTGCATTCGTTAGATTATTCCAATGTTT
CTGGTAAAAAACTATTTGAATCTAACAGAGGAGATGCATTTTCAGATATT
GACCGTTACATGAATTTACTGAAGATCAATGGTAATGATGATGTGAACAG
CGTTAGCACTGACAATTGCTTTCACTTATTTCCGAATTCACCATCTTTAA
CAGGAATCAATCTACAAGCAATCGAAGCAGAGATCAAAGAACTGAAGGAA
AAAGTTGCTGCTTTTGAAGAACAACCAGAAAGAACGTATTGTCATAATGA
TATCAATTGCCCAAATCTCATCTACGATGGGGATAAAGATCTTTAACAGG
AATCAATCTACAAGCAATCGAAGCAGAGATCAAAGAACTGAAGGAAAAAG
TTGCTGCTTTTGAAGAACAACCAGAAAGAACGTATTGTCATAATGATATC
AATTGCCCAAATCTCATCTACGATGGGGATAAAGGAACCTTTCACATCAT
CGATTATGAATACTCTGGAGTCAATTACGCCGCTTACGACATAGCTAATT
TCTTCGACGAGTTCCCAGGAACCTTTCACATCATCGATTATGAATACTCT
GGAGTCAATTACGCCGCTTACGACATAGCTAATTTCTTCGACGAGTTCCC
AGGGAACACGAACATCGACTTTTCATTATTTCCAAGTGAAGAAACTCAGA
GAAAATGGATCAAATATTACTGGATGGAAAGATTGAAGATAAACGGGAAC
ACGAACATCGACTTTTCATTATTTCCAAGTGAAGAAACTCAGAGAAAATG
GATCAAATATTACTGGATGGAAAGATTGAAGATAAACGGGAAAGAATGGA
TGGAGGATGATTGCGCTTCAAAAACAATGAATGATTTGTTTCTTCACGTT
CAAATCTTCACACTGGGAAAGAATGGATGGAGGATGATTGCGCTTCAAAA
ACAATGAATGATTTGTTTCTTCACGTTCAAATCTTCACACTGGTTTCGCA
CATTTTGTGGGGAGTATGGGCACTAGTCCAAGCACGTCATTTGTCCAATC
CTACTGAAATGAACGGGTTTCGCACATTTTGTGGGGAGTATGGGCACTAG
TCCAAGCACGTCATTTGTCCAATCCTACTGAAATGAACGGGTACGCTGAA
ATACGTTTGGTTGAATATTTCAAACAAAAGACAACGGTGATGGACGGTAT
AAGAGAAAAGACAATTGAATGAGTACGCTGAAATACGTTTGGTTGAATAT
TTCAAACAAAAGACAACGGTGATGGACGGTATAAGAGAAAAGACAATTGA
ATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000336_pilon | genome | sc0000336_pilon:327107..332232 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1072-1152:82 |
| Aaloc | 997-1068:304 |
| Aaloc | 922-996:710 |
| Aaloc | 829-918:1215 |
| Aaloc | 745-825:1893 |
| Aaloc | 598-741:3703 |
| Aaloc | 1-594:5127 |
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