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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:86501..92686+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014788 ID=XLOC_014788|Name=XLOC_014788|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6186bp|location=Sequence derived from alignment at sc0000159_pilon:86501..92686+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCTCTTTACTTTGCGGAATTTTGCTACTTTTCGCGTGTCATGGTAA
CGCTAATGGTGCGCCAAAATGCAAATATTCCGATGCATCTGACTTCTTGG
AGAACTACAACAAGGAGGCTAATTCACTCCAGAAGAAAGACACTTTAGCA
TCATGGAATTATGAAACAAATATGAACACAGCCAATAAGATAAAACAATC
TAAATTAAGCGCTAAAACGTCCTCTTTTGCAACGAAATCTCGAAATGAGG
CTAAATGCTTGTTAGACAGTACTTCGGATGAAGATATGACAGACAGTCAG
AAACGGCAATTAAAACTGATCACGAGAACTGCTTCCAGTTCAGATAGTGA
GGTCAACAAAAAGATGTCGAAGCTGGTATCCAAAATGACAGCTATATACA
GTGAAACAAAGGTAAACAAATTTGTtacttttaaactaaatttacaAATG
AAAATCAAACTTTAGTCACCTAAAATCTCAGAATAATGTGGTGAAATGAT
TCGCACTGATTTccaactacttgactggattgGACATTCCCTAAACCGGA
AGCATGTTTATAGCTTTCTAATTTTGGCCACTGATCTCCAACTTCCTGAC
TGGATTGGACACTCTGTATACCAGATTGTCTAATTTTActggttttaact
tttttctggTTTACAAAATAGCAGAATTAGGaaagtttcaaatttAaatg
atttGAAATTCAACCGAAGAATCTGtcatgaaaattatgaaaatagatac
acgctttttattagaatggtgtttttccaattcattatatgaatgttctt
aactttttgggaaaaattatcctgaaatattcttacagtctTCTTAGATG
TTTAGATTTAGATCCAAACCAAGCAAAAATCTAGCGTGCAATAAATACCT
CAGGCAAAGATTTGGTACTTTTGATGAACCTTTTAGCAATTGGCAATTTT
ATGGTATCCTTAgattcagttgccaaattccatgatggtgatattctcaA
TATAGGCAATATAGGGTCTTAATCCTTTGGCCAAtttcatggatattctt
ataaataaagcgtGCAGCCTTTCTGGTATGTAAGATGATTtcatgatttt
cttcttttaaacagataaaaaaaaagatagatAAAGATCCATACGAATTC
AAACTCAACTCACATCTTCTGCCTATCATGTCTACTGTCGAGCCAAAAAA
CATCGGTAATCTAAAATGGGCGTGGAATGTTTGGCGGAACGCGGTTGGTC
CGCCCATAAAGAAATTATACACCAAGTTTGTAGATCTGGCCAACCAAGGA
GCTGTTGAGAATGGATTTGCTGATTATGGTGATTATTGGCGACAGGAATA
TGAAGTCAACGATTTGGAGAAACAGATTGAATCTATCTTGGAAGAGATGA
ACCCTTTGTATAAAAAGCTACACGCGTATACAAGATATAAACTTAagtaa
gaatttgaaaaattgattacGATTTGGGTATTAGTGattaaaattaatgt
ttttgatTTGGTAGAAAGTCTTtggttaaagaaaaaaatgtacagtAGTT
GTGCGCTAAAAAGGTTTATACCTAAAGGAGGGGGCATTCAAATTCTGGTA
TTCGTGTATGCTGTCAAATGCAAATGACCGGTAGCCTGGTATTAAAAGAC
CGAATTTTGGTATTCCTGTCCGTCAGAACAGTTTTGACCActattgagaa
attttttgcCGGAACGCTGATATTTTATGAAGAAATTACCGGTAATCCAG
TATTTTGTACCCTCGGAAGTCTCGGTTTCAGGGATCTATTAGTCTATTTG
AAGCACGAGTTATTGAAGGTCTGAATAAGGTCACACGACTCCACAAATGC
AACTATATTAACCTTGATCACTCGACTATCTAATATTCTAATTGATTTAA
ACTTGTGGATGCGGCGTTTGATGATGAATGGAAATAGGTATGGAAATAAT
ACCGGGTGTCTCAGAAAAAAGTCCCCCTCTTTCAAGtgaatagcgagttt
atgtatttgtacttttgaagacggtaaagtgactgaagcaatttggaaaa
acccacagttctgacccgcaaaatcgatgCCGGTAAAAGATTTACCGtag
tcctcagtcagtcaggatgtagaaaaattagaaccttatcgtctccgtcg
cagaaaacacacatacataaactcagtAATACTCTTCAAAAGagggggac
ttttttctgggacacccggtacaaTGCATCGAAAAGCTCCTAACtttttt
ttGGCATGTTTAAACTATATAAACTATTCTTATCATCtttttttCTAACA
GTCGTAAACTTTCAGAAGACGTTGTCAAAGCAACAGGACCATTACCAGCC
CATCTTCTAAATATGTGGGCACAAAATTGGGGTCATTTATATTCTATATT
GGAGCCTTTCCCCGAAGAAACTGTTCCCGATGTAACAAACaccatgaaaa
agaaaaaatggaagaaaaaagatgtgttaaaaaaagCTGAAGAATTCTTT
GTTTCAATTGGTATGtttctaaaaatctttcttcCAAGCTCGTTCCCAGG
ACTTTTTGAGGATATTTTTGAGTTTCAATATGTTGTCTTGAAACAGCAAT
CTTACAatctcaaaacacccaaagaCCAAATTCATTAAAAACTCAGGTAA
TGTTAACAGGGGCGTatagaaataaacttttttcacatttgggACAAGAA
TACTCTCAGATGCCTAATAGACGTCTCTCTTTAAACCATTTTTTGATTTA
ACTTGACCCCAGACCTTATTGATATTTCTAGCTGTCAAGGGAAAGCCCTT
AAtcttacacccccttctcacagaccctctGGGAcctcttcccactggaa
aaatttgccaaaatatcgtcccgggtggaaaattatcctccaatttttat
ccccactgaaaataaacaaataatacAACACTCAATACTCCAAtactcac
tgcaaaatattatgtcaattttcccatccccactggattttctgacttga
aaacaaaagaattgaaatccccagcaatgaaaaatatggaaataacaatc
cccattgagtttcagtagtccgttatttttatccccactggctgaaaaaa
tcctaacgggtctgtgagaagggggtgtaatttTGCGACTATATTTacca
tatttatattttatcgTATTCAGAAGCATAGTTTCAAAGCCCagtaattg
aaaaaaaatatttttaagcgCCTATTTCAACCCTCTCACTTCTCAGTCAC
TTTGGAGTAGTCCTTGTTTTATAGGATTAATCAAGATGCTTTTTAATGAG
GTTGTAATAGATAGTACTGTTTATTTAGGTCTTGAATCGATGCCAGACAC
GTTCTATACAAAGTCTCTGTtcaagaaagaagatggaaagaaATCAGTTT
GTCATCCAAGTGCATGGGATATAGGAGATGGTGATGTCAGGTAAAATACA
TCCCTGTGCCCTGTGTTACAGACCCGGTGAGACCACgcccaactggaaaa
tttggccaaaatttcgtccctttTTGGAAAAAGATCACACAGTTTCAACC
CGactggaaaattgattttgtttttatccacatttgaaattcaatggaaa
aaaagtGCTTTAAAACCATCCCTGCTGGACTTAGAACAATAGATCTCTCT
CCCCACTGGATCTCGATGAAAACTTTCATCCGTGGGAAGAAGTTCCCCTT
GGatagtgagacaggggtgttaaagtAAACTTCCGATTACATCGAGCTAT
TCAAAGATTACACTAACAATAGCGGACATTCTAAAAATTAAGGTCTTTGA
ATTTAACAAACTAGCATATCCTAATTTTAAACCAACCTGCGTACAACCAA
TTTTCTAAATCTTTCTCTTACTTCCACTCATCCAAGTATCAACTCAGTTT
TAGTAGACTGGGTATAAAAATGGTGCCATGCTATTTTCGAACATTATGTA
AAATAGGTAAACCAATTGTTATGATTATTATGTTGATAATGCTAAATAGA
AACTAAATcctaggaaaattttaaaaattcacaTCGAAGTACGTAACTCA
GAACTGTATATAATAGTTGCTATTAAAGGATTAATTATTGACagtttaat
ttatgcaaaataaaTACCTATCCAATCCATTCACAACTAAGAAGTTCTCT
AAATAGTTCacttatttttcatctttccaAGGCTAAAGATGCCATGTATG
GGAGTATCACAACAAGATCTAATCACAGTCAGTCATGAAATGGGACATGC
TGAATATTATCTTCTATACCAAGACCAACCGGTTGAGTTCCGTACTGGTG
CTAACCCGGGTTTTCATGAAGCGGTTGGCGATACAATCGCACTATCAGTG
ATGACTCCAGAACATTTGAAAGAAATCGGACTTCTGAGTGATTATTCTGA
TAACGCAGGTTAGTTGAAGCGATTTATTCAAAAGTAACAAGCTGTACCTT
Tttaagctttcggatgttcttaactttttgaatctgaagcctaaaaatgt
tcttaatatgttcttattttcaccattttgtgagtaattttgtccatttt
cttaagaaatctggcgttttagagtctgcaaagctttaaaatgttcttaa
cttgttcttaaaattttggccatcgaagcctcatgttgttatatagtttg
ttcttacaaaaacacGTAAAATCTTCTCACGAAACTTGAGTCaaataatc
aattttgaaaatcacgaAACATCAAATTATCATGTCAAGAAatatatact
atatatgtatatacgaccatgattgtactatATCTTACACATATGCAACC
GAACCCAAGAGAGACTTGAGATAACTGATCCTTCTTTGTTGTATGAAAAC
ATGTGACTATACACAAACAAGGATGAGATATCGCTTTCCCTGTATATATC
TAACATGGAGGCCAAATGCCTTTGTTTAGTAATGTAGCATACTGGATAAA
AAATATACTAATGCTTGtttttttCTGTCTGTTTTATAGAGGAGGAGATC
AACTTTCTACTGAAGCAAGCTTTACAGAAAGTGGCGTTCATACCATTCTC
ATATATCATTGATAAATGGCGTTGGAGCGTCTTCAAGGGCGATACAGGGC
CAGATGACTATAATAAATATTGGTGGAAATTACGTAAACAATACCAGGGC
GTTGCCCCGCCCGAAAAATTAAAACGACGTAAAGGGCGTTCCAAAGAACT
GTTTGATGCTGGAACGTTTTTCCATGTAGCACATAACACGGaatatttga
gatattttttgaGTCACGTGTTACAATTTCAGTTTCATAAAGCATTATGT
GACGAAGCTGGCGTTAGTGAGGATTATCATAAATGTTCGatttataaaag
taaaaaagctGGTGAAAAATTAAAGTAAGTTTGACAGGTTATACTTTTAC
CCTTACATTGTTTGAGtcgccaattttaaaataaaatttctggTAATCGT
GTATTTACCATCAAACTACTTGCACAAGCAACATATTCAATGtatgattt
taaaatctttgctcACTTTTCAAGTATTTTATATACGCATTGTTTTTTAC
AAGGAACCAGgctatctcgtaaagtaaaaacTTTTAGATTATCTAAGCAT
GGCACAATATTTGACCTTGACctaataagcataaatatggtataatatca
gggggggggggtcaatgCAAATTTTCTAGAAAACGAACTAGAATGATAAG
CAATCCCAGGGCTGACCTAAAatttggagttgcttataaaaaaatgtgta
attccAAATGATTTTAACTGTCCAGTAAAAGGGAAGCCAAGAATATCCTT
TGCAACTATTTTCTCTTCTAATCTCACACGACGAACGTCGTTTTTACGTC
TGAATCTTTGGCttgataaaaataaagtttgaagcCCCGGAAGGGGGGTA
CTCGATTCAAAAATGACCATACTTGCGGCCCAAAAATTGGCCTTTGAAAT
CAGTGCAGAGAgattagccaaatttgagtaaattctTTTAAGGACTCAtg
caatatattttttcttttcacagGGAAATGTTATCATTGGGTAAAAGTCT
TCCTTGGCCAGACGTTTTAAAAGTACTGACCGGTTCAAAGACGTTGAGTT
CTAAGCCAATCATTGCTTACTTTAAACCTTTGGAAGATTGGCTTGATGAA
CATAGAAGACTGAATAGATATGAACTAGGCTGGTGA Coding sequence (CDS) from alignment at sc0000159_pilon:86501..92686+ >XLOC_014788 ID=XLOC_014788|Name=XLOC_014788|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3678bp|location=Sequence derived from alignment at sc0000159_pilon:86501..92686+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCTCTTTACTTTGCGGAATTTTGCTACTTTTCGCGTGTCATGGTAA
CGCTAATGGTGCGCCAAAATGCAAATATTCCGATGCATCTGACTTCTTGG
AGAACTACAACAAGGAGGCTAATTCACTCCAGAAGAAAGACACTTTAGCA
TCATGGAATTATGAAACAAATATGAACACAGCCAATAAGATAAAACAATC
TAAATTAAGCGCTAAAACGTCCTCTTTTGCAACGAAATCTCGAAATGAGG
CTAAATGCTTGTTAGACAGTACTTCGGATGAAGATATGACAGACAGTCAG
AAACGGCAATTAAAACTGATCACGAGAACTGCTTCCAGTTCAGATAGTGA
GGTCAACAAAAAGATGTCGAAGCTGGTATCCAAAATGACAGCTATATACA
GTGAAACAAAGATGAGCTCTTTACTTTGCGGAATTTTGCTACTTTTCGCG
TGTCATGGTAACGCTAATGGTGCGCCAAAATGCAAATATTCCGATGCATC
TGACTTCTTGGAGAACTACAACAAGGAGGCTAATTCACTCCAGAAGAAAG
ACACTTTAGCATCATGGAATTATGAAACAAATATGAACACAGCCAATAAG
ATAAAACAATCTAAATTAAGCGCTAAAACGTCCTCTTTTGCAACGAAATC
TCGAAATGAGGCTAAATGCTTGTTAGACAGTACTTCGGATGAAGATATGA
CAGACAGTCAGAAACGGCAATTAAAACTGATCACGAGAACTGCTTCCAGT
TCAGATAGTGAGGTCAACAAAAAGATGTCGAAGCTGGTATCCAAAATGAC
AGCTATATACAGTGAAACAAAGataaaaaaaaagatagatAAAGATCCAT
ACGAATTCAAACTCAACTCACATCTTCTGCCTATCATGTCTACTGTCGAG
CCAAAAAACATCGGTAATCTAAAATGGGCGTGGAATGTTTGGCGGAACGC
GGTTGGTCCGCCCATAAAGAAATTATACACCAAGTTTGTAGATCTGGCCA
ACCAAGGAGCTGTTGAGAATGGATTTGCTGATTATGGTGATTATTGGCGA
CAGGAATATGAAGTCAACGATTTGGAGAAACAGATTGAATCTATCTTGGA
AGAGATGAACCCTTTGTATAAAAAGCTACACGCGTATACAAGATATAAAC
TTAaataaaaaaaaagatagatAAAGATCCATACGAATTCAAACTCAACT
CACATCTTCTGCCTATCATGTCTACTGTCGAGCCAAAAAACATCGGTAAT
CTAAAATGGGCGTGGAATGTTTGGCGGAACGCGGTTGGTCCGCCCATAAA
GAAATTATACACCAAGTTTGTAGATCTGGCCAACCAAGGAGCTGTTGAGA
ATGGATTTGCTGATTATGGTGATTATTGGCGACAGGAATATGAAGTCAAC
GATTTGGAGAAACAGATTGAATCTATCTTGGAAGAGATGAACCCTTTGTA
TAAAAAGCTACACGCGTATACAAGATATAAACTTAaTCGTAAACTTTCAG
AAGACGTTGTCAAAGCAACAGGACCATTACCAGCCCATCTTCTAAATATG
TGGGCACAAAATTGGGGTCATTTATATTCTATATTGGAGCCTTTCCCCGA
AGAAACTGTTCCCGATGTAACAAACaccatgaaaaagaaaaaatggaaga
aaaaagatgtgttaaaaaaagCTGAAGAATTCTTTGTTTCAATTGTCGTA
AACTTTCAGAAGACGTTGTCAAAGCAACAGGACCATTACCAGCCCATCTT
CTAAATATGTGGGCACAAAATTGGGGTCATTTATATTCTATATTGGAGCC
TTTCCCCGAAGAAACTGTTCCCGATGTAACAAACaccatgaaaaagaaaa
aatggaagaaaaaagatgtgttaaaaaaagCTGAAGAATTCTTTGTTTCA
ATTGGTCTTGAATCGATGCCAGACACGTTCTATACAAAGTCTCTGTtcaa
gaaagaagatggaaagaaATCAGTTTGTCATCCAAGTGCATGGGATATAG
GAGATGGTGATGTCAGGTCTTGAATCGATGCCAGACACGTTCTATACAAA
GTCTCTGTtcaagaaagaagatggaaagaaATCAGTTTGTCATCCAAGTG
CATGGGATATAGGAGATGGTGATGTCAGGCTAAAGATGCCATGTATGGGA
GTATCACAACAAGATCTAATCACAGTCAGTCATGAAATGGGACATGCTGA
ATATTATCTTCTATACCAAGACCAACCGGTTGAGTTCCGTACTGGTGCTA
ACCCGGGTTTTCATGAAGCGGTTGGCGATACAATCGCACTATCAGTGATG
ACTCCAGAACATTTGAAAGAAATCGGACTTCTGAGTGATTATTCTGATAA
CGCAGGCTAAAGATGCCATGTATGGGAGTATCACAACAAGATCTAATCAC
AGTCAGTCATGAAATGGGACATGCTGAATATTATCTTCTATACCAAGACC
AACCGGTTGAGTTCCGTACTGGTGCTAACCCGGGTTTTCATGAAGCGGTT
GGCGATACAATCGCACTATCAGTGATGACTCCAGAACATTTGAAAGAAAT
CGGACTTCTGAGTGATTATTCTGATAACGCAGAGGAGGAGATCAACTTTC
TACTGAAGCAAGCTTTACAGAAAGTGGCGTTCATACCATTCTCATATATC
ATTGATAAATGGCGTTGGAGCGTCTTCAAGGGCGATACAGGGCCAGATGA
CTATAATAAATATTGGTGGAAATTACGTAAACAATACCAGGGCGTTGCCC
CGCCCGAAAAATTAAAACGACGTAAAGGGCGTTCCAAAGAACTGTTTGAT
GCTGGAACGTTTTTCCATGTAGCACATAACACGGaatatttgagatattt
tttgaGTCACGTGTTACAATTTCAGTTTCATAAAGCATTATGTGACGAAG
CTGGCGTTAGTGAGGATTATCATAAATGTTCGatttataaaagtaaaaaa
gctGGTGAAAAATTAAAAGGAGGAGATCAACTTTCTACTGAAGCAAGCTT
TACAGAAAGTGGCGTTCATACCATTCTCATATATCATTGATAAATGGCGT
TGGAGCGTCTTCAAGGGCGATACAGGGCCAGATGACTATAATAAATATTG
GTGGAAATTACGTAAACAATACCAGGGCGTTGCCCCGCCCGAAAAATTAA
AACGACGTAAAGGGCGTTCCAAAGAACTGTTTGATGCTGGAACGTTTTTC
CATGTAGCACATAACACGGaatatttgagatattttttgaGTCACGTGTT
ACAATTTCAGTTTCATAAAGCATTATGTGACGAAGCTGGCGTTAGTGAGG
ATTATCATAAATGTTCGatttataaaagtaaaaaagctGGTGAAAAATTA
AAGGAAATGTTATCATTGGGTAAAAGTCTTCCTTGGCCAGACGTTTTAAA
AGTACTGACCGGTTCAAAGACGTTGAGTTCTAAGCCAATCATTGCTTACT
TTAAACCTTTGGAAGATTGGCTTGATGAACATAGAAGACTGAATAGATAT
GAACTAGGCTGGTGAGGAAATGTTATCATTGGGTAAAAGTCTTCCTTGGC
CAGACGTTTTAAAAGTACTGACCGGTTCAAAGACGTTGAGTTCTAAGCCA
ATCATTGCTTACTTTAAACCTTTGGAAGATTGGCTTGATGAACATAGAAG
ACTGAATAGATATGAACTAGGCTGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:86501..92686 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1678-1839:6025 |
| Aaloc | 1294-1674:4992 |
| Aaloc | 1066-1290:4183 |
| Aaloc | 955-1062:3331 |
| Aaloc | 745-951:2303 |
| Aaloc | 412-741:1115 |
| Aaloc | 1-411:1 |
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