XLOC_014622 (mRNA) -

Overview
NameXLOC_014622
Unique NameXLOC_014622
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000278_pilon:243461..244309+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014622 ID=XLOC_014622|Name=XLOC_014622|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=849bp|location=Sequence derived from alignment at sc0000278_pilon:243461..244309+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATGACACAAGTGATTGGCTTGAAAGTAAAACTATTGATGAACGTGA TGAAATATTAGATAAGGCCCGAAAGTTAGCTCCTAAAATGAAAGCAAAAT ATGATGAACGGAAAATTACTTTAGTCTCTGCGAAGAAAGaaagattggaa aaaaaaaacaaaaagagaagattgaaattaaagagaaagcagcagcgaaa aaaaCCTTAGCAGTCAACAATTTAGTCCAAGCAGGGCACAAAGTATGGCT AATAGAACAGGAAGCCGAAGAAAACCTTAATTCTATTGAAGAAGATAAAC ACAAATGCAAGATTCTTTTGCTACAAATTGCATTTTATAAAGATGTAATG GATGTAGATTGTTCCAAGTCTTACTTCAACAAAACAAGGATGAATGAAGA TGGGAAAAGAATCAACTTGCCCTGGTCGGAGCTCCTGGATAATTTGAAAG CTATCATGAAATTTAGTAGAATAAAACCTGATCAAGTTGTTAAGcctaag aaacttaagtttctcTCAAGAGAGAGGGGAGATTTTAAACAGCCACAAAA AAGACCTGTTCGAAAACTTAAATGATTCAAGAATGAAGGAATTTTCTAAC AACCAAATAAAGACCCTTATGCCAACATTTCTAGTAAATCCTGAATGCAT TGTGGAAAGAAAAGTTAGGTACCGTGTCAAAGAAGAAGATGATCGAGTAC ATTGGAGTCtagctgaaataaaaaaactcgCTAAACCCCATAAGATTCCC AGGAAAATTCtctttcaaattgaatttaGTGATGATGATGAAATTAATGA TTTACCTGTTCTCTCagacttttctaaaaaatatgttctgtttatttga

Coding sequence (CDS) from alignment at sc0000278_pilon:243461..244309+

>XLOC_014622 ID=XLOC_014622|Name=XLOC_014622|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1698bp|location=Sequence derived from alignment at sc0000278_pilon:243461..244309+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATGACACAAGTGATTGGCTTGAAAGTAAAACTATTGATGAACGTGA
TGAAATATTAGATAAGGCCCGAAAGTTAGCTCCTAAAATGAAAGCAAAAT
ATGATGAACGGAAAATTACTTTAGTCTCTGCGAAGAAAGaaagattggaa
aaaaaaaacaaaaagagaagattgaaattaaagagaaagcagcagcgaaa
aaaaCCTTAGCAGTCAACAATTTAGTCCAAGCAGGGCACAAAGTATGGCT
AATAGAACAGGAAGCCGAAGAAAACCTTAATTCTATTGAAGAAGATAAAC
ACAAATGCAAGATTCTTTTGCTACAAATTGCATTTTATAAAGATGTAATG
GATGTAGATTGTTCCAAGTCTTACTTCAACAAAACAAGGATGAATGAAGA
TGGGAAAAGAATCAACTTGCCCTGGTCGGAGCTCCTGGATAATTTGAAAG
CTATCATGAAATTTAGTAGAATAAAACCTGATCAAGTTGTTAAGcctaag
aaacttaagtttctcTCAAGAGAGAGGGGAGATTTTAAACAGCCACAAAA
AAGACCTGTTCGAAAACTTAAATGATTCAAGAATGAAGGAATTTTCTAAC
AACCAAATAAAGACCCTTATGCCAACATTTCTAGTAAATCCTGAATGCAT
TGTGGAAAGAAAAGTTAGGTACCGTGTCAAAGAAGAAGATGATCGAGTAC
ATTGGAGTCtagctgaaataaaaaaactcgCTAAACCCCATAAGATTCCC
AGGAAAATTCtctttcaaattgaatttaGTGATGATGATGAAATTAATGA
TTTACCTGTTCTCTCagacttttctaaaaaatatgttctgtttatttgaA
AGAATGACACAAGTGATTGGCTTGAAAGTAAAACTATTGATGAACGTGAT
GAAATATTAGATAAGGCCCGAAAGTTAGCTCCTAAAATGAAAGCAAAATA
TGATGAACGGAAAATTACTTTAGTCTCTGCGAAGAAAGaaagattggaaa
aaaaaaacaaaaagagaagattgaaattaaagagaaagcagcagcgaaaa
aaaCCTTAGCAGTCAACAATTTAGTCCAAGCAGGGCACAAAGTATGGCTA
ATAGAACAGGAAGCCGAAGAAAACCTTAATTCTATTGAAGAAGATAAACA
CAAATGCAAGATTCTTTTGCTACAAATTGCATTTTATAAAGATGTAATGG
ATGTAGATTGTTCCAAGTCTTACTTCAACAAAACAAGGATGAATGAAGAT
GGGAAAAGAATCAACTTGCCCTGGTCGGAGCTCCTGGATAATTTGAAAGC
TATCATGAAATTTAGTAGAATAAAACCTGATCAAGTTGTTAAGcctaaga
aacttaagtttctcTCAAGAGAGAGGGGAGATTTTAAACAGCCACAAAAA
AGACCTGTTCGAAAACTTAAATGATTCAAGAATGAAGGAATTTTCTAACA
ACCAAATAAAGACCCTTATGCCAACATTTCTAGTAAATCCTGAATGCATT
GTGGAAAGAAAAGTTAGGTACCGTGTCAAAGAAGAAGATGATCGAGTACA
TTGGAGTCtagctgaaataaaaaaactcgCTAAACCCCATAAGATTCCCA
GGAAAATTCtctttcaaattgaatttaGTGATGATGATGAAATTAATGAT
TTACCTGTTCTCTCagacttttctaaaaaatatgttctgtttatttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_014622XLOC_014622-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000278_pilongenomesc0000278_pilon:243461..244309 +
Properties
Property NameValue
Aaloc517-855:511
Aaloc160-516:153
Aaloc10-159:1