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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000401_pilon:209360..211005+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014584 ID=XLOC_014584|Name=XLOC_014584|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1646bp|location=Sequence derived from alignment at sc0000401_pilon:209360..211005+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAAgttaaaagtcattaaaaatgatattgTGTCGTACCAAATTACCGAT
TTATTTGTGTGCACTTCAAGTTATATTTATTTGGTTAGTGGAAGCTTATA
TTTTCGATATGGTCGCTAAAAATGAAGTACCTACTCGTGACCCTGTGGAT
GAGATTTCAACAGAATTGAAACAAGTCTGTTTTTCGAAATGTCATTACAT
GCCGAAATCTTGTCAATCGATGATCATTGAGTCTGTTGGCGAACGTAATT
TCATTTGCAAGTTTTATgattttacttttgatttccATCCTGAACTTCAG
GGGTATACTGGTAAGTCTTgctatttttattttccttttttccttttcat
tgaatgggctcttccagaaaacttttgtaaatggggggtggaggatatat
taaggatattttgtccggggggtaatgaaaatctgcaaaatttgccttgt
tttagggGCAAACTTTCCGCTCTGATTAGAGGTGATTTTGaatttccggg
gggggggggtaaatttccaaaaatgttataaTACTAGGTCCGACTTCCCT
AGGATTGATTCTCGACAAGCGTGTGTAGTCATTACATTGACGCTCTCTCA
CAGATACACTTCGTTTCTAGTTGTAAACTTGAGTCCAATCCCCTTGTTGA
GTTGGGGTTTATACGCAATTTTTACCTTCATGCTTGAGTTTAGTCAGTTT
TCACCAATGTCCAGAATTAcattaaatgttttattttaacataTATGTTA
CCGTTTCATATAAGACGCGTGTTTCATATCGGGACATTGTCTGCCtattt
gttatattatgctgatataaacaaaataatgtttttcttttcctcttttc
tgACCAGTCTTGCTCCGCATCCGTACTAATCAAATGTAAAAAagcgatat
cactcttattttaaaaacaaaacctttaattttcaatcctttttggTCTT
TGTTCTTTCATAGGTATCTCATCGTCAACGCTTTATTATTCGAAGAAATA
CTTCAAAAAAGATTGCCACGCTTGGTTTCTATCCGGCGCTAGAGAAGATG
GCCCTTATGACATCCTCATCGCAGGAAAATATCCTGAAACAGTAATATGC
AAGATGGTCGATGATGGATCTAAGATGGAAGGAGGCTGGATAATGGCTTT
GAACAAAACCAGGACTCATACACATGGCGAATCAAATGATTTTGAGCTTT
ATTGGGAAGACTATAAAAATGGTTTCGAGGTCAACTCTGGGCTCTACTTG
GGCAATGAATATCTTCATTTGTTGACGGAATATGAACATCAACAATTGTG
GGCCATCTATGATCACGAAAGGAGAGAAGAATTCTACCCCAAAGTCATAG
TGAAAGCGGAAGCTGATAATTACACAATTCTTTTGGATGGTGCCACGTCT
AGGCATGAAAGCTTTGGTGGAATGGTACACGGAAACCCTTTTAGTGCAAG
ACTCGGCCCAAATGTAAATGAACATAATCCTACTTGCCCACTTAGAAAAT
TAGGCTACTGGTATTTGCCTATACAACCACCAACTACTAATATACAACCA
TGCAGAGACTATTATAGACTATTTGACCCAAGCACCAAAGGAAATAATCG
TTTTAAAGTGAAATATGCCTACATTTTGCTTCGCCCTAAACTTTGA Coding sequence (CDS) from alignment at sc0000401_pilon:209360..211005+ >XLOC_014584 ID=XLOC_014584|Name=XLOC_014584|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1986bp|location=Sequence derived from alignment at sc0000401_pilon:209360..211005+ (Clytia hemisphaerica_ch_hm2_pilon)
CAAAgttaaaagtcattaaaaatgatattgTGTCGTACCAAATTACCGAT
TTATTTGTGTGCACTTCAAGTTATATTTATTTGGTTAGTGGAAGCTTATA
TTTTCGATATGGTCGCTAAAAATGAAGTACCTACTCGTGACCCTGTGGAT
GAGATTTCAACAGAATTGAAACAAGTCTGTTTTTCGAAATGTCATTACAT
GCCGAAATCTTGTCAATCGATGATCATTGAGTCTGTTGGCGAACGTAATT
TCATTTGCAAGTTTTATgattttacttttgatttccATCCTGAACTTCAG
GGGTATACTGCAAAgttaaaagtcattaaaaatgatattgTGTCGTACCA
AATTACCGATTTATTTGTGTGCACTTCAAGTTATATTTATTTGGTTAGTG
GAAGCTTATATTTTCGATATGGTCGCTAAAAATGAAGTACCTACTCGTGA
CCCTGTGGATGAGATTTCAACAGAATTGAAACAAGTCTGTTTTTCGAAAT
GTCATTACATGCCGAAATCTTGTCAATCGATGATCATTGAGTCTGTTGGC
GAACGTAATTTCATTTGCAAGTTTTATgattttacttttgatttccATCC
TGAACTTCAGGGGTATACTGGTATCTCATCGTCAACGCTTTATTATTCGA
AGAAATACTTCAAAAAAGATTGCCACGCTTGGTTTCTATCCGGCGCTAGA
GAAGATGGCCCTTATGACATCCTCATCGCAGGAAAATATCCTGAAACAGT
AATATGCAAGATGGTCGATGATGGATCTAAGATGGAAGGAGGCTGGATAA
TGGCTTTGAACAAAACCAGGACTCATACACATGGCGAATCAAATGATTTT
GAGCTTTATTGGGAAGACTATAAAAATGGTTTCGAGGTCAACTCTGGGCT
CTACTTGGGCAATGAATATCTTCATTTGTTGACGGAATATGAACATCAAC
AATTGTGGGCCATCTATGATCACGAAAGGAGAGAAGAATTCTACCCCAAA
GTCATAGTGAAAGCGGAAGCTGATAATTACACAATTCTTTTGGATGGTGC
CACGTCTAGGCATGAAAGCTTTGGTGGAATGGTACACGGAAACCCTTTTA
GTGCAAGACTCGGCCCAAATGTAAATGAACATAATCCTACTTGCCCACTT
AGAAAATTAGGCTACTGGTATTTGCCTATACAACCACCAACTACTAATAT
ACAACCATGCAGAGACTATTATAGACTATTTGACCCAAGCACCAAAGGAA
ATAATCGTTTTAAAGTGAAATATGCCTACATTTTGCTTCGCCCTAAACTT
TGAGTATCTCATCGTCAACGCTTTATTATTCGAAGAAATACTTCAAAAAA
GATTGCCACGCTTGGTTTCTATCCGGCGCTAGAGAAGATGGCCCTTATGA
CATCCTCATCGCAGGAAAATATCCTGAAACAGTAATATGCAAGATGGTCG
ATGATGGATCTAAGATGGAAGGAGGCTGGATAATGGCTTTGAACAAAACC
AGGACTCATACACATGGCGAATCAAATGATTTTGAGCTTTATTGGGAAGA
CTATAAAAATGGTTTCGAGGTCAACTCTGGGCTCTACTTGGGCAATGAAT
ATCTTCATTTGTTGACGGAATATGAACATCAACAATTGTGGGCCATCTAT
GATCACGAAAGGAGAGAAGAATTCTACCCCAAAGTCATAGTGAAAGCGGA
AGCTGATAATTACACAATTCTTTTGGATGGTGCCACGTCTAGGCATGAAA
GCTTTGGTGGAATGGTACACGGAAACCCTTTTAGTGCAAGACTCGGCCCA
AATGTAAATGAACATAATCCTACTTGCCCACTTAGAAAATTAGGCTACTG
GTATTTGCCTATACAACCACCAACTACTAATATACAACCATGCAGAGACT
ATTATAGACTATTTGACCCAAGCACCAAAGGAAATAATCGTTTTAAAGTG
AAATATGCCTACATTTTGCTTCGCCCTAAACTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000401_pilon | genome | sc0000401_pilon:209360..211005 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 808-987:1467 |
| Aaloc | 313-807:966 |
| Aaloc | 1-309:1 |
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