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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000401_pilon:199652..203892+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014583 ID=XLOC_014583|Name=XLOC_014583|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4241bp|location=Sequence derived from alignment at sc0000401_pilon:199652..203892+ (Clytia hemisphaerica_ch_hm2_pilon)
CGTGTTTCAAGAGTGGTTAACATATTCACATCTCATGTACCAACATCGAG
TCAAGCTTCAGCAAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATT
ATCACCGATATGAAGAAATTTGTCCTGATTTCAACTGGTTATCTAAAGAG
GCGTTACCATGGTTTCAACTTGCCAATCACACTGATCCAACTCGTGGGAT
CGTTCACAATCTAGTCATCAAGCCTGTGTACCAATTCAGTATTATAACAc
ttcaaacacaaaacaaaaaagctgATTTGAAGCAATCTGGAGGTGACCAC
TGGCGTGTCCAAATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAA
AATAGATCATCGCAACGGCTCTTATGAATTTCGATTTGTTCCTGTAGTAT
CCGGTACATATCAAGCGCTCATATGGTTGGAATATACACTATGTGCAGGG
CTGAAGGAACCACCACCTGATTGGTTCATAAAGGGTATGAATCTTAATAA
ATTtctggtttttctttttgaggCTTAATTGGTGACTTCCAGGGTATGAT
CTGGGTAATTTATGAAATGTTGAGTATTGACTGTATATTAATGTCAAATT
CTTCAATAAATGTTCATAACTGTAGGATTGATTAGTGCGGTAATTCTACT
TTTACAATTGATTGCTCTaccaaaatagaccttttcataaattacgtcac
gaacatcacttgccttgtgtattcaaacaattaccatggcaataatttca
aaacgaggtaagtgatgtttgtaacgtaatttatgaaaagcatTGTGGTA
ATCGGAGATGAGTTCTGTTTTGCCAAGATACTTTAaacgaagaaactttc
gcgaattttgggaATTTACTCTCGCAAAATGGCTCATTCAACTATATTTC
ACGAAAATTAACGTTCGTGAATAACAAATTAGACCATAATTTCGCGAGAA
TTAACTTACACCTATCTTTATAacatttactcttaggttccaaataaacg
ggggggttcgaataaacgggggggttggaaaattttctagatttcaataa
acgggggggacctaattgccggggggggttggaaattgtacttctgaaac
ccaaaaataaggtaaaaataggctaaaatcaggctatttagagcaaaata
aggggccttctctttgacagctgaaaatattcttagagattaataaacgg
gggggtcctaataaggtccgggggggttggaaaattttcgaaaaattaac
aagcgggggggcccgtttatttggaacctaagagtaccagAGAGAAATGC
ATTATTAAAGCAAGATACATTTTATTTAGGGGGCtgaccaatttttttta
atttaagtgAAAAAATTACGTATTTCGCCGGAATTAACTTTCCCGAATGA
CaatttgaccatattttgcgGCTATTAGCTTTATATTTACCTTAGGCATA
TTTCGCGGAACTTAATATTCGCGATTTAGCCGAAAAATCGCGAacttgcg
aaagtttcttcctttaaattaTTGTGATAAATGGTCCATCCGAACCGAAT
CTTAGTTGGATCACTGatatcggggaaaccggttcttTACCTGTTGTCGT
CGTCTATTTTTCAGGAACAGTGCAAGGGAAAGAACAAAAGCAAGGTTCAT
TGCATAGAGATTCTCCTTTCATCAACAAACCATTATGGTCTGGTGCTAAG
TTTCAATTCTATGTTCCACCACCAGCAAAAAAGCTAGGTAAATTTCGCTA
TTGGTCGTATTCATTTCTTATCTGGACATTGAACCGTTTATGTTTTCTAT
GTAATCTTTTTAAGGTTCAGCGATCTAAATATACCTGTACACGTTTAACG
TCTACATGTATATTAATCAAcccttttatttttccaaatattCCTTAGCA
CTTCAAGAACATTCAACATCTCACTGCAAATCTCAAGGGTGTCAATTTCT
TTGGAACGGTTTTGGAAACTGGTTGAACAAGACACATTGGGTGCCTCGAT
GTCCCCATTCCACGGAATTGCGCTATCCCAAGGAACATCCGCGTAGAGGT
AAACTAACCCTTTCTAGCCTCGTTTGTTGTTAAAGGCTGTATCTTTAAAT
CTTTAACCCATTAAATGCCATCTCTCCgtgacttcaaattttctaaTATT
TGTGCGTACATACCCCAACTAAGAAAATGATGTCTAATCTCCTACTCATT
AACCGATTTGGGCTTTGACCTTGCAACTTTTGAATTGAACTACCGTGACA
CTAAAGTCTATAATGCGGTGAGACAATATATATGACAATATAGGGATCAA
ATTTGATCTCGTAATATAAAAGGATTTTTTGGATAATCTTACCATGGTAA
ACGATAGCCactaagcataaatatggtataatatgaAGGGtgatcaaagc
aaatttttccgaaaatgaTCAGGGCTTATCCGAAAATTGAggttgctttt
taaaaaatgggtATATGCGTTATCATTAGTAACCTTAAATTATAATATCT
TTTCTGTGCAGGTCTTTTGTGGATTTTCGGTGATTCTGTATCATCACAGT
TTTACCACCAAATCAAGTTTCATCCTTTATGTCAACACCATTTCGCACGA
TGCATGTATTCATACAACTGGCTCTACAGCTTGGAGAACTATAACGCGTC
CTTGGGAAGGTACGTATTGTGTTTCggtaaaacctttttttttcgcATTA
TGTatttgggctcttccagaaaaaaaatttaatatatgGGGGATGGAGGT
ATAACATCACCCCCCGGACAAGcttcagttgaccccccgggcATTCAGAA
TCACCCATAATCAGCAAGTTTGCACCtaaaaaaaggcaaattttgcagat
ttttcactaccccttggacaaaatatccaatatatcatCCAccccccccc
ACCCATGTACAAAacttttctggaagagccctttCTTTATGGAGCGACGA
CCGACTTCAAATGTTCCGTTCACTTGATATAAAAGGTGATTCACAAAAAG
AGGACCGCACTTTAGAAtttttgccgtaaccttttttctggtttctgttt
tttttgtttttttttgtatgaaCATGAATTTTTAACACTTCTCTTCCCTG
GTTAGTTTGGGTCTTGAAGATATTATGGTTTTATATTGAACAGAGAAAAA
GCTACCTCAAAGAGTCTAGAAGTTTCGTTTTAAAAATCCTGTAAAGGCGT
TTTCTGTACACAAGCCCAGTATATGCAGCttatatcaaaattcattgtac
tacgaagcgataaacgtgagttACACTCTGGTATAGAATGTGTAAGGTGT
CGAACGGCTCTAGAAAGCTAAAAGAAATACAGTGATTgtaattttgaagt
tttgtctgtgtacctagctttgcttataagaaaatgacTTGATTAGTAAt
tataatcttaatttttcaggtaCACGCGTAGAAACACTACCATCGAAAAG
ACAACTTGGGATGACCTTGATTACAATGTGAATCGTACGGTTGCCGAACT
CAGACAAGTTCTTCTTCACCCTGGAATGCAATCTAGAGAAAGCGTACTTT
TGCTAAATTACGGTCTGCATTTTACCGAGTCATTAAATTACACGAACTAC
AAAACAGCTATCGAATCGGTGATTGACGTATTAAAACGTGAAGCATATTG
TCATGTTGTATGGCGCACAACGACCTCTTTGAACCGTCACAAATATTCAC
AACCGAACTTACATTCTAGGAGATTCATGACATCGCCGGTAAGATTCATG
AATAATTGCTCCTGATCAATTACCACTGCGGACAATCGTGTGACTAAAAT
GAAATATTAGACTTCCACGTAGCTCCTCCAACATTTTGCGTGATCGCTAC
TATTTTCTTGCGCGATGGCGtttttttCGTGAACGTGATGAGAACCAAGA
ATTCGCCCAGATGAGGGGTGCCTCTGACGGGATGATGGGCTCTTCTGCTC
ATTTTTCTCCTAACTAGCTTAAGAAGATTAATTTTCAAAGTTGTTTAGCA
TAATTTATACACCAccttgaaaaactttaattttcttttttagagaGTCG
AGTTATACAATGCATATGCAGCGAGTAGGTTTTGTGAAGAGTACTTCGAC
GTTCTTGATGTCTACCCCCTGACGGATTCGTACCCTGAGGGAACTGGATC
GAGTAAAACTCCTCACGACCCAGTCCACTATGAGTATCACGTGATGCGTC
CAATGGAAAAACTATTGGAACGTGTTTTTAAAGTCAAATGA Coding sequence (CDS) from alignment at sc0000401_pilon:199652..203892+ >XLOC_014583 ID=XLOC_014583|Name=XLOC_014583|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2844bp|location=Sequence derived from alignment at sc0000401_pilon:199652..203892+ (Clytia hemisphaerica_ch_hm2_pilon)
CGTGTTTCAAGAGTGGTTAACATATTCACATCTCATGTACCAACATCGAG
TCAAGCTTCAGCAAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATT
ATCACCGATATGAAGAAATTTGTCCTGATTTCAACTGGTTATCTAAAGAG
GCGTTACCATGGTTTCAACTTGCCAATCACACTGATCCAACTCGTGGGAT
CGTTCACAATCTAGTCATCAAGCCTGTGTACCAATTCAGTATTATAACAc
ttcaaacacaaaacaaaaaagctgATTTGAAGCAATCTGGAGGTGACCAC
TGGCGTGTCCAAATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAA
AATAGATCATCGCAACGGCTCTTATGAATTTCGATTTGTTCCTGTAGTAT
CCGGTACATATCAAGCGCTCATATGGTTGGAATATACACTATGTGCAGGG
CTGAAGGAACCACCACCTGATTGGTTCATAAAGGCGTGTTTCAAGAGTGG
TTAACATATTCACATCTCATGTACCAACATCGAGTCAAGCTTCAGCAAGA
TATTGGGAAGAGTGGAACCAATGGCGTGTCGATTATCACCGATATGAAGA
AATTTGTCCTGATTTCAACTGGTTATCTAAAGAGGCGTTACCATGGTTTC
AACTTGCCAATCACACTGATCCAACTCGTGGGATCGTTCACAATCTAGTC
ATCAAGCCTGTGTACCAATTCAGTATTATAACActtcaaacacaaaacaa
aaaagctgATTTGAAGCAATCTGGAGGTGACCACTGGCGTGTCCAAATCA
AAGGACCCTACTCCGCATCGAGTCTGGTCCGTAAAATAGATCATCGCAAC
GGCTCTTATGAATTTCGATTTGTTCCTGTAGTATCCGGTACATATCAAGC
GCTCATATGGTTGGAATATACACTATGTGCAGGGCTGAAGGAACCACCAC
CTGATTGGTTCATAAAGGGAACAGTGCAAGGGAAAGAACAAAAGCAAGGT
TCATTGCATAGAGATTCTCCTTTCATCAACAAACCATTATGGTCTGGTGC
TAAGTTTCAATTCTATGTTCCACCACCAGCAAAAAAGCTAGGAACAGTGC
AAGGGAAAGAACAAAAGCAAGGTTCATTGCATAGAGATTCTCCTTTCATC
AACAAACCATTATGGTCTGGTGCTAAGTTTCAATTCTATGTTCCACCACC
AGCAAAAAAGCTAGCACTTCAAGAACATTCAACATCTCACTGCAAATCTC
AAGGGTGTCAATTTCTTTGGAACGGTTTTGGAAACTGGTTGAACAAGACA
CATTGGGTGCCTCGATGTCCCCATTCCACGGAATTGCGCTATCCCAAGGA
ACATCCGCGTAGAGCACTTCAAGAACATTCAACATCTCACTGCAAATCTC
AAGGGTGTCAATTTCTTTGGAACGGTTTTGGAAACTGGTTGAACAAGACA
CATTGGGTGCCTCGATGTCCCCATTCCACGGAATTGCGCTATCCCAAGGA
ACATCCGCGTAGAGGTCTTTTGTGGATTTTCGGTGATTCTGTATCATCAC
AGTTTTACCACCAAATCAAGTTTCATCCTTTATGTCAACACCATTTCGCA
CGATGCATGTATTCATACAACTGGCTCTACAGCTTGGAGAACTATAACGC
GTCCTTGGGAAGGTCTTTTGTGGATTTTCGGTGATTCTGTATCATCACAG
TTTTACCACCAAATCAAGTTTCATCCTTTATGTCAACACCATTTCGCACG
ATGCATGTATTCATACAACTGGCTCTACAGCTTGGAGAACTATAACGCGT
CCTTGGGAAGgtaCACGCGTAGAAACACTACCATCGAAAAGACAACTTGG
GATGACCTTGATTACAATGTGAATCGTACGGTTGCCGAACTCAGACAAGT
TCTTCTTCACCCTGGAATGCAATCTAGAGAAAGCGTACTTTTGCTAAATT
ACGGTCTGCATTTTACCGAGTCATTAAATTACACGAACTACAAAACAGCT
ATCGAATCGGTGATTGACGTATTAAAACGTGAAGCATATTGTCATGTTGT
ATGGCGCACAACGACCTCTTTGAACCGTCACAAATATTCACAACCGAACT
TACATTCTAGGAGATTCATGACATCGCCGgtaCACGCGTAGAAACACTAC
CATCGAAAAGACAACTTGGGATGACCTTGATTACAATGTGAATCGTACGG
TTGCCGAACTCAGACAAGTTCTTCTTCACCCTGGAATGCAATCTAGAGAA
AGCGTACTTTTGCTAAATTACGGTCTGCATTTTACCGAGTCATTAAATTA
CACGAACTACAAAACAGCTATCGAATCGGTGATTGACGTATTAAAACGTG
AAGCATATTGTCATGTTGTATGGCGCACAACGACCTCTTTGAACCGTCAC
AAATATTCACAACCGAACTTACATTCTAGGAGATTCATGACATCGCCGag
aGTCGAGTTATACAATGCATATGCAGCGAGTAGGTTTTGTGAAGAGTACT
TCGACGTTCTTGATGTCTACCCCCTGACGGATTCGTACCCTGAGGGAACT
GGATCGAGTAAAACTCCTCACGACCCAGTCCACTATGAGTATCACGTGAT
GCGTCCAATGGAAAAACTATTGGAACGTGTTTTTAAAGTCAAATGAagaG
TCGAGTTATACAATGCATATGCAGCGAGTAGGTTTTGTGAAGAGTACTTC
GACGTTCTTGATGTCTACCCCCTGACGGATTCGTACCCTGAGGGAACTGG
ATCGAGTAAAACTCCTCACGACCCAGTCCACTATGAGTATCACGTGATGC
GTCCAATGGAAAAACTATTGGAACGTGTTTTTAAAGTCAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000401_pilon | genome | sc0000401_pilon:199652..203892 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1225-1422:4044 |
| Aaloc | 907-1224:3421 |
| Aaloc | 760-903:2514 |
| Aaloc | 610-756:1901 |
| Aaloc | 487-606:1617 |
| Aaloc | 1-483:1 |
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