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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000401_pilon:67400..69855+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014576 ID=XLOC_014576|Name=XLOC_014576|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2456bp|location=Sequence derived from alignment at sc0000401_pilon:67400..69855+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaATGAGAAACAAAGTATAGCTTTAGTGAATGATCAATTAAAGATCCG
ACCGTATGTCAACAAAAGTCAGTTGAAAGATATTGCATTGAAATGTTTTG
GCTTCGAACTGGATGAAGGAGTTGAGCCGATGGAAATGGTATCTTATGAG
GATAGGAACTTTAGAATTCAAGGTATTGCAAGCATGAttctcatttcaat
ttttttctgaatttctaGCTGAATTAACAAGACTTTGGCAACAAAAATAT
GATATCAGGAAGGATTTATTTGATAGTCCTTTTCATGGTCAAAATTAATC
ACGAGAATAATCAGGACTGATTACGCCCTAATGTTGACTTCCCGTTGGta
acaagtaaaaaaatccaaaattttggacAAAATTCTATTCGGAGCATgtt
ggtcctgattacccatgattcattttgaCTATGAAATGGCCTAAACTGAA
CTAGGGAAAACGACCACGTAAGAAACTCGCACTAATCCATCCACTTTCGA
AAATAGCCACAAATAAACGTACTTTATTTTgatattcgaaaatctaattt
ttaaaaGGCACAATATATTGGTAAACAATATTCTACAAAATGGTTAAGGA
GTCGTAATGTACGATGTTAATACCTTTTCTTAATGTAACAGGTTCTGTaa
taaaaaaaaggaatttctatctgtaaacaatccccccattttgtttgtat
attggAAATTGAGGTATATTGCAGAcatcttttcaatatattgtgaGCAC
TTTACGAAATACTGCCGGCACTCGCCAATACATTATCTGATGTATTGATT
AGTGTCAAGTATGTAGCTTTTTACTTAGCGATATTCAAATATTTCACAGA
GTTTCTTCATTTCGTACCTTTCTGTTGCAAAGGTTCGAATGTTGTATCTT
TAACAACTAaattctttttaactttttcttattttacagGGAGATGTACA
GGTGAAAAAGTTTCAAGATGTTTTgtgatgaaaatatttaacaggGGAAC
TTCAAATGAAGACACTTTGGAACAtattattaatttgattttatatAGCA
AATCTAAATGCTCTCAACATTTTGCTGTTCAAACTCCAATACCATCCATC
AGTTCAAGTGACCAAAATATGAAATACATCTCATCCTATGATATCCCAAT
TCTTCCAAACGCATCATATGATGATTGTACTAAATCAAgtttgattgaaa
aaggattactTGATATTAGTCCAACAGGACAAACGACTTGTTGCCATAAT
ATTCGATTGCTGACTTATCTTGAAGGAAGACCTCCCAAGCTTTCTGAAGA
AAAAGTGACAGATGAGTTTGCTCAAGATTGGGGTGCCACTTCAGGTCGAC
TTTGTAATGCACTGGAGGTATGATACatgtattttataaaaataaaacaa
ttaaataaaCCCAGGGAAAGACATGTGACTATTATGTACGAATTATAAGG
GTACCCAATTTCATACCTCAAACAGATCCCAAAATCACTAAAATCGGGAA
TTTccctctcaaagggtcacgatatTTACGATGTTGCTGAAATAAAACAT
ATAAGCCAGATTATGATCTACGTGTAAATCCCTTTTATCTCTGATGATTT
AGTggattgttaattttttataaactcAAATACTGaaaactcgaatgtct
ctttcACTCGAACAGGTTTTCTGGACCATTTAGGTGATAAACCTTGTTAA
TAGTTTATAaactctccataactcgaattttaGGGTCTTTATTTGCACCG
AAGACAATTTTTCAActgattttttcataagaagttCTACTGGATGCTCT
ATTATGCTTatcctttttaaatttcaatgctttaaaaattctatttatta
tttcaggaggttccaaaatcagaaaaagttgatCGAGAGAAATCAATTTG
CAATTTAATCACTGTtgggaaatatttgaaatccaCTTATCTAGAAGCCG
TTAAGCAcgccaaacaaaaacaaactttcacGGACATCATTGAGAAATTC
GAAACACAGATCTTACctcaacttgaaaaaaatgtcaagaaaTCCTACAT
ACATGGTGATATAAATGAAGTAAACCTTCTACTAGACTCAAGTGGAAAAA
TTGGTGGCGTCATTGACTTTGATGATGCTGTTTGGTCTTTTTCAATCGTT
GACTTAGCTATCtctttcatgcatttttccTTGTATCTGGATGAAAATGC
ATTCActcataaaatgaaaaaactttacCAAGGGTATACATCTGCTCGTC
AAATCACTGATTTAGAGAGAGACTTGCTTTATGATATAACTTTGATGAGC
TATGCTCAATGGTCAGTTTTAGCAAGTCACCAATACCATGTGTTAGACCC
TGGCAATAAATATATTCATGATTTTCTTCAGAAAAGTTGGCAAGGGTTAA
GTTTATTGCTTTTAATGAGTAAGGAtatgtttttagaaaaagtatGCACT
CAATAA Coding sequence (CDS) from alignment at sc0000401_pilon:67400..69855+ >XLOC_014576 ID=XLOC_014576|Name=XLOC_014576|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000401_pilon:67400..69855+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaATGAGAAACAAAGTATAGCTTTAGTGAATGATCAATTAAAGATCCG
ACCGTATGTCAACAAAAGTCAGTTGAAAGATATTGCATTGAAATGTTTTG
GCTTCGAACTGGATGAAGGAGTTGAGCCGATGGAAATGGTATCTTATGAG
GATAGGAACTTTAGAATTCAAGatgaATGAGAAACAAAGTATAGCTTTAG
TGAATGATCAATTAAAGATCCGACCGTATGTCAACAAAAGTCAGTTGAAA
GATATTGCATTGAAATGTTTTGGCTTCGAACTGGATGAAGGAGTTGAGCC
GATGGAAATGGTATCTTATGAGGATAGGAACTTTAGAATTCAAGGGAGAT
GTACAGGTGAAAAAGTTTCAAGATGTTTTgtgatgaaaatatttaacagg
GGAACTTCAAATGAAGACACTTTGGAACAtattattaatttgattttata
tAGCAAATCTAAATGCTCTCAACATTTTGCTGTTCAAACTCCAATACCAT
CCATCAGTTCAAGTGACCAAAATATGAAATACATCTCATCCTATGATATC
CCAATTCTTCCAAACGCATCATATGATGATTGTACTAAATCAAgtttgat
tgaaaaaggattactTGATATTAGTCCAACAGGACAAACGACTTGTTGCC
ATAATATTCGATTGCTGACTTATCTTGAAGGAAGACCTCCCAAGCTTTCT
GAAGAAAAAGTGACAGATGAGTTTGCTCAAGATTGGGGTGCCACTTCAGG
TCGACTTTGTAATGCACTGGAGGGAGATGTACAGGTGAAAAAGTTTCAAG
ATGTTTTgtgatgaaaatatttaacaggGGAACTTCAAATGAAGACACTT
TGGAACAtattattaatttgattttatatAGCAAATCTAAATGCTCTCAA
CATTTTGCTGTTCAAACTCCAATACCATCCATCAGTTCAAGTGACCAAAA
TATGAAATACATCTCATCCTATGATATCCCAATTCTTCCAAACGCATCAT
ATGATGATTGTACTAAATCAAgtttgattgaaaaaggattactTGATATT
AGTCCAACAGGACAAACGACTTGTTGCCATAATATTCGATTGCTGACTTA
TCTTGAAGGAAGACCTCCCAAGCTTTCTGAAGAAAAAGTGACAGATGAGT
TTGCTCAAGATTGGGGTGCCACTTCAGGTCGACTTTGTAATGCACTGGAG
gaggttccaaaatcagaaaaagttgatCGAGAGAAATCAATTTGCAATTT
AATCACTGTtgggaaatatttgaaatccaCTTATCTAGAAGCCGTTAAGC
AcgccaaacaaaaacaaactttcacGGACATCATTGAGAAATTCGAAACA
CAGATCTTACctcaacttgaaaaaaatgtcaagaaaTCCTACATACATGG
TGATATAAATGAAGTAAACCTTCTACTAGACTCAAGTGGAAAAATTGGTG
GCGTCATTGACTTTGATGATGCTGTTTGGTCTTTTTCAATCGTTGACTTA
GCTATCtctttcatgcatttttccTTGTATCTGGATGAAAATGCATTCAc
tcataaaatgaaaaaactttacCAAGGGTATACATCTGCTCGTCAAATCA
CTGATTTAGAGAGAGACTTGCTTTATGATATAACTTTGATGAGCTATGCT
CAATGGTCAGTTTTAGCAAGTCACCAATACCATGTGTTAGACCCTGGCAA
TAAATATATTCATGATTTTCTTCAGAAAAGTTGGCAAGGGTTAAGTTTAT
TGCTTTTAATGAGTAAGGAtatgtttttagaaaaagtatGCACTCAATAA
gaggttccaaaatcagaaaaagttgatCGAGAGAAATCAATTTGCAATTT
AATCACTGTtgggaaatatttgaaatccaCTTATCTAGAAGCCGTTAAGC
AcgccaaacaaaaacaaactttcacGGACATCATTGAGAAATTCGAAACA
CAGATCTTACctcaacttgaaaaaaatgtcaagaaaTCCTACATACATGG
TGATATAAATGAAGTAAACCTTCTACTAGACTCAAGTGGAAAAATTGGTG
GCGTCATTGACTTTGATGATGCTGTTTGGTCTTTTTCAATCGTTGACTTA
GCTATCtctttcatgcatttttccTTGTATCTGGATGAAAATGCATTCAc
tcataaaatgaaaaaactttacCAAGGGTATACATCTGCTCGTCAAATCA
CTGATTTAGAGAGAGACTTGCTTTATGATATAACTTTGATGAGCTATGCT
CAATGGTCAGTTTTAGCAAGTCACCAATACCATGTGTTAGACCCTGGCAA
TAAATATATTCATGATTTTCTTCAGAAAAGTTGGCAAGGGTTAAGTTTAT
TGCTTTTAATGAGTAAGGAtatgtttttagaaaaagtatGCACTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000401_pilon | genome | sc0000401_pilon:67400..69855 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 601-1200:1857 |
| Aaloc | 175-600:942 |
| Aaloc | 1-171:1 |
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