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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:1597580..1601963+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014546 ID=XLOC_014546|Name=XLOC_014546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4384bp|location=Sequence derived from alignment at sc0000018_pilon:1597580..1601963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAGCAATATATTATCAGATTTGAAACTTCCCGAGCCAGACGTTCG
ATTGGTAGTTTACAATCAAACCATAGTCAAAGTCAAGTTGAGATGCCGTA
ATGCTCAAATCACTGGTGAAACGAACCATGAAAGGTACTTatatattttg
aagattttggttTGACTTAATTTCACGAATTATTCATTATTGGTGAGCTT
TTATGTGAAACTGTGTTGATGGTTTTGGATATTTGCATTATTAATGcttt
ttctcttgacacttcTTCATATGACCTTGCCAAAATGGCTTTGGAAGAAA
AACACCCCCTTGAGACGGAGAAGTTTTATCGTTTTTATAGAAGTTTTATG
AAATTGCAttttggaattaatttttgtaCATATAACAACATCGACTACCC
TCCAGTCctttgttttaaagatttttctttccattttacAGCATGAAATT
CTGGAAGAAAAACAAGACTCAAAACGACATAAaggtatcgaatagtagag
tccattcgctttaagtgtgcactgaACCTTTGTTTGGCTTGTCATTTGAT
AATAAATGTTTCAACTTTAACATATGATATATCGTTGAAAAGATGATTCA
GAGCACtataatttctgaaaaaataattcaaaaattttagtaaatgaaga
tgaaaaatgaagatgaaaaaagtgaattttttattttttattcttaaTGC
ACAAAGCTGCGGATTAGCAATGCAAAACATGATCGAGTCCGAcctttaaa
taaattttgtttcgGCCTAAAATActggaaatcgtcgtttttcagatttt
cattgcattttattgttagatttcattattttttctcacAGAAACGTTAT
TGATAGCAATACACACAATCAAGCAtgatttaattgtcaataaaactgat
ttttgcatcCCTCGAGCTgtagttgatattttttcatgaaatttcgcaca
ctgatgcaaaattaggctgcgcgcatccccagaatttattttgttatagg
gaATGCGTATCGTGTttgaaattctcgtccgagagttacctaaaatttgg
ggtaaccaaaatttgcatgaatttaaaaaattaaaaaaagagctTCGTTa
gatttaaagtttttaaaatttctgcTACTCGCaaaaaaaGGTTCCCTAAG
GgtaaaatatctgaaaaaggGCAGAGCACGTTAATTTGACAACTTCGGAC
ACTACTGTTAGCTTGGTTTGGAGTTAAATACTGGATAAAATGCGTCAAGG
GCGGTTATATTGAACGATATTTCTTATTTTAGCGGGCCATGAAGTACATA
TTAAGTGGATCGAACAAGATTGAACCCATACGGACAGATGAACTTGTCAT
TTATCCATGTATCTTTTTCATTACGTTATTTTCATCATcaatttcgaaat
ttatttgttttgatgtaCCAAAATTTATAAACTAGTATTCGCTGGCCTGA
ATGTATATAGTCTTGTGAATTTGAGTTTGGGTGGTAGGATATCTTGTAAG
AATTTCCTTGACCTAAATCCCaaaaaaaaTCAGACAAGCGTGAATGGCCG
AACGCATCTAAATTTGAATTCACTCGTGAGGGAGACACGTTAAACTGTTC
ACAAGATCTATATATGTTTTACATTGAACGTATTGAAGATAAACAAACAC
CAACAACACCAGTCACCATGAGAGCTCAAACGCGTGAAGAACAAATTGTA
TTGGTCGTGGATGAAAAGACACCTGTTAATTGTAAGTTTTCACTCTCTTA
TTGGTTTATCAAGGAATATAAACCAATTTCGTTATTTTCGACCTTGGATT
GCCTTTCCTCATAATTGTTCATAGTTTTCTAGATTTCTTCGTACTCTACT
ACAGTGGTGGATCTAAGGCCTTTCAAAATTTATGGCGGAGAGCGTTTATA
TGTGAACCATAATCCTTATGAGGATATTTCTCCGTCAGAAATTTTGAACC
TTCTTTAGATCAGATGTTTCAGATCCGCAAATGCTTTATCTAATTTTTTA
ACATTCTTACGATTAAGTGTAATTATATTCTCGTGGTTTTCATGGGCTTC
GATAAGTTTTTAAACATATTGAGTTATCCAAATGATCAATTTCAGTGTTA
AGTTAGCTtgtgtttattgattttcagcACCAGCTCAGAGAAGTATAGTT
AGCACACGAAATTCAGGAAAGGTATAGCAACAGAATATTCAATTTATAAT
TTTGCAGGATTGTTATCAGTTTGTCGATGGAAAGGTTCCTTTAATAAACT
TTTAGTAATATGGGGTGACTCAAAAAACTTTGGATTTCTGACGAACTTTT
GAGACCAAACAAAGttatactttcttttttctagttaaagtaattttgag
atcaaattatttctttttgtcCCAGGAAGTCGCCTAACGCCCTAAGTTAT
TTGAGTCAGTCGGTATAGTTTTTGTTTCCAGAAACCTTAGTAAAGTTAAT
ACCAATACTTTTACGTTCAGCCACTCTATTTGCCGTTTTTTGCACCAGTT
CTGTATCCATTTAAATATCCCCACAGTAAAAGACAGAGTATTTTTCATTA
GTTTAGAGTGTCCGAGAGTCATCAATAGACCATATTATTGAAAGTTCTCT
TTATCGTTTTCCTTGTGCTTCTGAATGCGCTGcttttggcttcaattttg
tcatttttttgtatccaataagttttctttttttgggctttggaattttt
CCTGTGACATAGCAATTTTACTGATGTAACTCGCTTCCTCTTAAGAAAGG
TTTTTCAAAATACTCTTCtttgtgataaaaaaaaaaactggacTAGAAAA
TCGAGGAAATTAGTGAAAACGTCATCATTTAATGGTTCAATTCCAATCTA
TTAGCCATACGAACCGTTCGTAATGATGGTTGTGTTTTATCTACAGTaca
ctctcgcttattcgaacttctattattccaatcactctataattcgaaat
tgTTTCCAGTCCCGTCAATGAGAAACcatcttaaaatactttctataatt
tgaatttttctgtaattcgaacaaataagatttcccgttcgagttcgaat
taacgATAGTCAActttaataaactttttttctattgtagcagattcatg
taaaaaagtcacgaaaaaacgtcgagcaAAGCCCTGACTAGCTGAATATT
GCACACATaagcgttttttttttcaaaatgtccagaatatgcagtgccgt
agcaactgggggggcaaggggggctatgcccccccaataatttttttaaa
aatggttattttgcaaaatgcaaagtttttcttttttaatttgtcataat
tgtctttatgtgcatgttttgagtgtatttttaagcaatctagagctcaa
atttttaaaatttcccccctcgggccaaaccatggttggccctcgccgTG
TCACTAAACTCcagcccccccccaatatgaaaatgcttcctacggcactg
atatGAGTTAATCTTGTAtgtctcagccaatcagagctttactcgacgtt
ttttatATCAATCTGGTAAAAGGAAATTTGTGCATTCCTATTTCTTTACA
TAGCGTTCGTTACGAGGTAGAGCGTTGACTGATTCGCTGAAAAAGAAACG
AAGAAGAATCAATTCTATTCATGAAGAATCGTCTCAAAGCTCAACTGTAA
GACTATTTTCTTGAGCTGTTctgaaaacccttttttcccAACATAAAGTC
GGTctggaaaaaataaaacagatttttcataaagtaaaatcctaagagtc
attttgcaatttttggaaaCAAATCACCCCCATGTCACTTTACAATGAcc
ccccccTATTTTATGACATGAATGCTacgaagtgccaaaattggcGTACC
CACGTATTGGAGTAcccaccccctgcttattccacccccccccccccccc
cctacaattGAGCACACAGGAGTATAACAAATCGTGATAGAATATATGAG
GTTTTTTATTTGCAGTTAACtgtctataattcgaacttttataattcgaa
tctttctctaatttgaactaaaactttggtcccctcagctgaaaaTTAGT
TTAAAATGTTCTCTAAAATTCGagtctttctgtaattcgaagaaaggttt
tagtcccttgaagatcgagttAAAGAGAGGCAACTGTAAACTCGTTCTGC
TCCGCtttttttCTGGACGCACTATATTTGGCTTTGATCTGTATATGACT
ActaaactttaaataaaaatacagCTTGATTATCTTCATAGCTCAGACGT
CCCTAACGGacggttcgagttatggagattctaTCCATATTGTCCATCAA
TTTATATTATTTACCAAAAAGATTGTTCTGCTTGTTTACATATTTCAGGA
CGAAAAGATTGACTCAAGTGACGAAGAGAGAGGT Coding sequence (CDS) from alignment at sc0000018_pilon:1597580..1601963+ >XLOC_014546 ID=XLOC_014546|Name=XLOC_014546|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000018_pilon:1597580..1601963+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAGCAATATATTATCAGATTTGAAACTTCCCGAGCCAGACGTTCG
ATTGGTAGTTTACAATCAAACCATAGTCAAAGTCAAGTTGAGATGCCGTA
ATGCTCAAATCACTGGTGAAACGAACCATGAAAGATGAGTAGCAATATAT
TATCAGATTTGAAACTTCCCGAGCCAGACGTTCGATTGGTAGTTTACAAT
CAAACCATAGTCAAAGTCAAGTTGAGATGCCGTAATGCTCAAATCACTGG
TGAAACGAACCATGAAAGCATGAAATTCTGGAAGAAAAACAAGACTCAAA
ACGACATAAagCATGAAATTCTGGAAGAAAAACAAGACTCAAAACGACAT
AAagCGGGCCATGAAGTACATATTAAGTGGATCGAACAAGATTGAACCCA
TACGGACAGATGAACTTGTCATTTATCCATCGGGCCATGAAGTACATATT
AAGTGGATCGAACAAGATTGAACCCATACGGACAGATGAACTTGTCATTT
ATCCATACAAGCGTGAATGGCCGAACGCATCTAAATTTGAATTCACTCGT
GAGGGAGACACGTTAAACTGTTCACAAGATCTATATATGTTTTACATTGA
ACGTATTGAAGATAAACAAACACCAACAACACCAGTCACCATGAGAGCTC
AAACGCGTGAAGAACAAATTGTATTGGTCGTGGATGAAAAGACACCTGTT
AATTACAAGCGTGAATGGCCGAACGCATCTAAATTTGAATTCACTCGTGA
GGGAGACACGTTAAACTGTTCACAAGATCTATATATGTTTTACATTGAAC
GTATTGAAGATAAACAAACACCAACAACACCAGTCACCATGAGAGCTCAA
ACGCGTGAAGAACAAATTGTATTGGTCGTGGATGAAAAGACACCTGTTAA
TTcACCAGCTCAGAGAAGTATAGTTAGCACACGAAATTCAGGAAAGcACC
AGCTCAGAGAAGTATAGTTAGCACACGAAATTCAGGAAAGCGTTCGTTAC
GAGGTAGAGCGTTGACTGATTCGCTGAAAAAGAAACGAAGAAGAATCAAT
TCTATTCATGAAGAATCGTCTCAAAGCTCAACTCGTTCGTTACGAGGTAG
AGCGTTGACTGATTCGCTGAAAAAGAAACGAAGAAGAATCAATTCTATTC
ATGAAGAATCGTCTCAAAGCTCAACTGACGAAAAGATTGACTCAAGTGAC
GAAGAGAGAGGTGACGAAAAGATTGACTCAAGTGACGAAGAGAGAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:1597580..1601963 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 589-624:4349 |
| Aaloc | 496-588:3554 |
| Aaloc | 454-495:2130 |
| Aaloc | 256-450:1536 |
| Aaloc | 178-252:1283 |
| Aaloc | 136-177:443 |
| Aaloc | 1-132:1 |
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