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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000018_pilon:1536761..1541267+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014544 ID=XLOC_014544|Name=XLOC_014544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4507bp|location=Sequence derived from alignment at sc0000018_pilon:1536761..1541267+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTATAAAGTTTTCCAACAGATTCGTTCAATCACaattataagaaa
tcaaagtcACTCAATTTCAAATGTAAGTACAGTAAATTCGTTTTGACGTG
TTcaatacagtatatggcccttAAAATATCCCTCTGGAGATCTCAGTTac
aaatattttgtcaaatattttgctttagttacaaatattttgttaaagtt
tttgCAGTGTTGGAAAATTCATTGAATCTATTTTTAGTCCCATAAATCTT
TTCTTAAAAACTTTATTGATATTTGTAATCGATTTCAATTTCGGTCACAA
CTTTTTAATTGGCTCCTAAAATGtagctttgaaattttggtgatttttcc
GGATAAAGTACttttaatattaaaaaatgATTCCTGTATTTAATCGTTCA
ACACATTATTATTTCAGCTATTTAACAATTTCTTCCGACATACACATTCA
CACAACAGCCATTTCCTAAATTCAAAAGGTGGGGAATCTTCGAAATTATT
GACGATAACAAAAAGATCTCTATCTGCTGAAGCAAAGAAGAAGAAACCCA
CCAACCGTGGACCAATTGGTTGGGCTTCTCTAGCAGTGTTTATGTTAACA
GGGGGTGGTATAGTTGCTTATGTCCGATATGAAAAAGAGGAGAAACGCAA
AGGTCAGTTGAAGTTGAAATCTTATTTTTGTAATGTTGAACATTTAGAAC
AAATCGCGcataaattttaatttactAGTAAGGTAAAACTCTCCGTAGCT
CAAAGCTCTTTGATTGGAATTTCTCCTTAAGTGAAACATCATAGGGGCTG
GGAGAGGTCCATAATTTGATGGTTTGAAATATAAACTTTCTCCTAAATTT
TGAGGTTGTCCTTTAATGATAGAGTTTGTTTTAGTAGATTTGCAGGTAGT
ATTTCACGTCTTATTCAATACCATATTAGAGAAGTGGTTTGGTgcttctt
ttgtttcaaaatgatGTGTAAGCAAATTTTAGAAGGTACGTTAAATGATG
TCCTTTATTAAAGTAGTCAAATAAACAACATATGTCTAAATCAATATTTC
AGCTTCATGACCTTTTTCAAAGGCGAATAGTAGATAGTACCTGAAGGTAT
CACGTATGTATTTTTTACAACATTCTCTTATCGTTTTAGCCAAGGAGAAG
GAGATGAAAAAATCAGTTGGGATGGCTGCCATCGGTGGTCCTTTTGAACT
AGTTGATACGAATGGAAATACTGTCACTGATAAAGATTTCTTTGGGAAAT
GGCTTCTTTTATATTTTGGATTCTGTCATTGCCCAGATATATGTCCTGAC
CAATTGGAAAAGTTATCTACTGTTGTGGAAAAAATAGGTACAACGTTATC
ATTTATTAAGAAGGCActattttattgatttaaattgaaaatcttttgtt
attCTTGAATTATCATCCCATCCTTTTTAGTTATCTTTGTTGCATTGTTA
TTTTCACGGATTTTTAAAACTCCGATCTCGCTATAGCAGTTAACTTGTTT
GCTTTGGTGCTGCAGAtttttttCTCCGTAGATGGTTGCAACCATCAATA
ATGCCTGTAATCGTCTacagaaaaaagaattttggatTCCTTTCAGTTAT
TTTAGCCTTGGGTTCTAACCCCTCTCTCTCTGACTTTTAAGTTTaaagtt
aaaagttaaaaatcaatataaatgttttttctcttttgtaCTCTTGTATA
TAACCCACTTCTGTTAAAGAAAACTAGTTTTAAAAAGTAAACGTTTTAGA
TTAAAATCTGAGGCTCGTTGCGAAAACtatgaaaaatattcatttgaGGC
AAAATTTAGCATTATTCGTTTTGTCAATTTTAGACGCCATACCAAATCTA
CCGAACGTACAACCTGTCTTTATCACTGTTGACCCACATCGAGATACTGT
GGCTGCTGTAAAAGAATACATTCAAGGTAATAAATGTCGCACAAACTAAA
TTTATGTTATagttattgaaaataaatttagacGATTGCACTGGACAGAC
GTCAATCCTTCTTTCAGCTCTAGAATTGTACTGCAAGAGCGTCATGAATT
TATTTAATAAGACCGAGAATTCTCCCCTGAGAAGCCCGGAGATTCTATAC
TTCAATAACATTCAGTAAATCGTCTATATAAACGAATAGTCGTTACTGCG
CGAAGAAAAAGTCGTTAAAACATCTAGTTTAGTCTACCACTATGAACGGG
TCTCaacctttttcttatccctTCGTAGTATAGCATGTTAGCCAACATAG
TAGTGCatagtagaaaataagcaaaaagtaatggaaggGACAAATGGTAG
TAATTTgatacaaactgatattatctcgtaacaattatcgtatcATCACA
AAAACAACCTTGTTACTGTATTACACCCTATATAGTGTGCCCCAAAAAGG
CGGACAAATTCttatataaagtaaaacccTTATGATTTTATGACTTGTTT
ACTTATATCTCCAGAACCTATTCAAtcatatttagaatttaatattttat
tgatGGAACAGAGAATTGTAatgttatttcaatttttaaagccCAGCTTA
AATACTGAGTTTTGAGGATTCGACTTATATGAAAATTTGTcccctttttt
tgggacacactgtaaaCTACTCCACTCTAAtccttttgtagattttcatc
CACGAATGGTTGGATTGAGCGGCACGGAAGAACAAGTGAAGAAGGCCTGT
AAAGCGTATCGTGTATATTATTCAGCTGGTCctaaagatgaagatgaaga
ctATATCGTAAGTTATTGAAAAGGTTTTTGGGTGCAGTATTAGAATTTCC
TCCGCCCAAGACGAATTTCCGTCCCAGCGTAGTATATTAGCGAGTTAATG
TATGTGTATTTTTcttgactgactgaggacgatggTAATTCACCACTTTC
ATCGTCTTCGATTTTTCGGGTTTTTCCTAATCGCTTCAATCActccaccg
tcctcaaaagtgcaaatacaaaAACTCACTTCTATAGAGTGgattttccg
tctcaaaattctgcataattcactAAAATTTCAAGGACATGTGTTAATTC
GCTGTGGAAAATGTTCCTTCTCGAAAGACCTTGCTTTCACCACTGATTAT
ACTCTAACGTGAATAGTGAATTTTGAACACATCAATCCTTTTTTAATTCT
TGGGTATAAATATGTGTAGCGCAGTCAATGGTAACGCGAAGGGTGTCTTT
TCACCCAAAAAGCAAGGTAAAGAGAGGACGcccttttttcacttttttgt
acTTACATTCCTCTCTTTACTggttgaaaatttcaagcaaagAGTTACCA
AGTACCATTTTTAAGTCCTCTTTCAAACTCTAATCTAATTATTTCCCCAT
TTTCTTTCATACACGGCTTTTGCTGAGAAGTTAAAGATAACGCTTAAAAA
GAATTTCCAAGGGAGTTCTAAACAAGTACTTCTTTGTGGTCACGCTaagc
gttttttttttctttctaaagaaTAATTTAAAATGTTGTAAAAAGTCTGG
CGTGGGTTTCAGCAAAGATATGGGAACTTCAAATATAAGACTAATTGATT
GGTTTAACAGACCTTGTTTTTAACGTCTCTAAACGTGAGCCATTTTTAAG
TTGTTTAAAATACCATATTGATTATAGAAATCTGCGTCAAAAATGTATCG
GTTTAATTGTATTATCTTCAACGtcacaaaaaaagaatttctcacAAATC
TATTTGATTCGGAAGATAAATTACTGTAACTCAAGGAACAGGCGTCTTTT
GAGTTAGATATTTCTTCCGCCTTGCTACTCATTTAGGCAAAGGGTATAGG
CTACTGATTTGGACAGATTGTATCCAAAAGACGTAAGATTTACAATGTCC
AGGGGTTAGTGGGGATGCGATCTGTTTGATGCTTAACCAGTGTTGTCCAA
GGGTTTACAaatcaaaataatgaatttaagttctttttataagaatcgca
aagctcaaatttgaaaaaattttaagaaatttttaagaatcattttcagt
tttccatttttatctataatatGAATCAGACATGTAAACCATATGCGggc
tttttgagattttgaattttttgtttttgtttcttacTTCTTTCCCGCAT
GCTTGAGACAATACTTGAAaggaaaatatataattttaaaaaccatTAAC
TTAAAGAAACTTTCATCTAATTTCTTTTAATATTTATGAATCATTTTGGA
ATTTAAGGGTCAAAACTAAAAACTCTTAGGGTCACGAGGCTCAATTTGAT
CAAGGAATTTCTCACAAAAAATGTCTAAATCATTGGATAATTATTGGACT
TAATATCCTCCAACTTCCAGTAATTATAGCTgaagatttaaagattttta
tattttactttcCATTTAGGTTGATCATACAATCATTACTTATCTTATTG
GACCGGACGGAAAattcatcgaatatttcggACAGAATCGTGAAATTAAT
GAAATTGTAGGTTCCATAAGTACTAGAATGGCTTTGTCTAAGAAAAAATC
GTCTTGA Coding sequence (CDS) from alignment at sc0000018_pilon:1536761..1541267+ >XLOC_014544 ID=XLOC_014544|Name=XLOC_014544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000018_pilon:1536761..1541267+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTATAAAGTTTTCCAACAGATTCGTTCAATCACaattataagaaa
tcaaagtcACTCAATTTCAAATATGGCTTATAAAGTTTTCCAACAGATTC
GTTCAATCACaattataagaaatcaaagtcACTCAATTTCAAATCTATTT
AACAATTTCTTCCGACATACACATTCACACAACAGCCATTTCCTAAATTC
AAAAGGTGGGGAATCTTCGAAATTATTGACGATAACAAAAAGATCTCTAT
CTGCTGAAGCAAAGAAGAAGAAACCCACCAACCGTGGACCAATTGGTTGG
GCTTCTCTAGCAGTGTTTATGTTAACAGGGGGTGGTATAGTTGCTTATGT
CCGATATGAAAAAGAGGAGAAACGCAAAGCTATTTAACAATTTCTTCCGA
CATACACATTCACACAACAGCCATTTCCTAAATTCAAAAGGTGGGGAATC
TTCGAAATTATTGACGATAACAAAAAGATCTCTATCTGCTGAAGCAAAGA
AGAAGAAACCCACCAACCGTGGACCAATTGGTTGGGCTTCTCTAGCAGTG
TTTATGTTAACAGGGGGTGGTATAGTTGCTTATGTCCGATATGAAAAAGA
GGAGAAACGCAAAGCCAAGGAGAAGGAGATGAAAAAATCAGTTGGGATGG
CTGCCATCGGTGGTCCTTTTGAACTAGTTGATACGAATGGAAATACTGTC
ACTGATAAAGATTTCTTTGGGAAATGGCTTCTTTTATATTTTGGATTCTG
TCATTGCCCAGATATATGTCCTGACCAATTGGAAAAGTTATCTACTGTTG
TGGAAAAAATAGCCAAGGAGAAGGAGATGAAAAAATCAGTTGGGATGGCT
GCCATCGGTGGTCCTTTTGAACTAGTTGATACGAATGGAAATACTGTCAC
TGATAAAGATTTCTTTGGGAAATGGCTTCTTTTATATTTTGGATTCTGTC
ATTGCCCAGATATATGTCCTGACCAATTGGAAAAGTTATCTACTGTTGTG
GAAAAAATAGACGCCATACCAAATCTACCGAACGTACAACCTGTCTTTAT
CACTGTTGACCCACATCGAGATACTGTGGCTGCTGTAAAAGAATACATTC
AAGACGCCATACCAAATCTACCGAACGTACAACCTGTCTTTATCACTGTT
GACCCACATCGAGATACTGTGGCTGCTGTAAAAGAATACATTCAAGattt
tcatcCACGAATGGTTGGATTGAGCGGCACGGAAGAACAAGTGAAGAAGG
CCTGTAAAGCGTATCGTGTATATTATTCAGCTGGTCctaaagatgaagat
gaagactATATCattttcatcCACGAATGGTTGGATTGAGCGGCACGGAA
GAACAAGTGAAGAAGGCCTGTAAAGCGTATCGTGTATATTATTCAGCTGG
TCctaaagatgaagatgaagactATATCGTTGATCATACAATCATTACTT
ATCTTATTGGACCGGACGGAAAattcatcgaatatttcggACAGAATCGT
GAAATTAATGAAATTGTAGGTTCCATAAGTACTAGAATGGCTTTGTCTAA
GAAAAAATCGTCTTGAGTTGATCATACAATCATTACTTATCTTATTGGAC
CGGACGGAAAattcatcgaatatttcggACAGAATCGTGAAATTAATGAA
ATTGTAGGTTCCATAAGTACTAGAATGGCTTTGTCTAAGAAAAAATCGTC
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018_pilon | genome | sc0000018_pilon:1536761..1541267 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-852:4370 |
| Aaloc | 601-714:2644 |
| Aaloc | 508-597:1836 |
| Aaloc | 310-504:1142 |
| Aaloc | 73-306:418 |
| Aaloc | 1-72:1 |
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