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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000359_pilon:300257..306377+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014488 ID=XLOC_014488|Name=XLOC_014488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6121bp|location=Sequence derived from alignment at sc0000359_pilon:300257..306377+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatcatCACGGCAGCATAGATGCTATGCACGATCAAGCCGAAGAACA
ATCCACGTCATCAACGAAGGAGAGcaaaaagaaatccaaagaaaacctaa
ACAAGGATACAGAGGACTCCACCTTAgatgataaaaacgaaaacaacaat
ctaatcaataataaggataaaaagaaatccaaaaaggataaatcCAATAC
GTCAAACAGACAACCGgtttctttcaaaacaaaatattttccatgGATTG
TTTGCGCTACAAGCTTTGTGGTCCAGTTTTTCGTGCTGGGCTTTTATAAA
GCTTTTGGTCCGGTCTATGTGAAATTGTTACAAGAAGAACCAGAGGGGTA
TGGAGGTAGCCCCGTCGCTACTTGTAAGTATTTACTTTGCTTGCCACCAT
AATCTCCCAGTATCCTTGTCTCGAGAAGCTTTTAACCAATAGGAATGCGA
TTTATAAGGAGCTTTACAGTTGACgttagaaataaaaatttaggcTAGCA
AATTTCCCTTTTCTCCATGTGCACAATCCTAGATTAAAGTAGAGTCTCTC
ACacgttttctcgtcccttcagttaacaaagccttataaaccttactcca
taactcgaaatttcactaactcgaacaaattcgtgtTCCTCGTGtgagtt
cgagttatggagactccaatgTATTGAATTCATTGAAATTTCCCCTTGTC
TTTTTAAAGCATGGGTAGCTTCACTTTCCATCAGTACATCATACCTAAGC
ACACCTTTATCCTTTGAAATCATCCGAAGAATCAAGTTTCGACCCGCCAT
GTTGATCGGTGCTACGTTATCAGGTATTCATTCAGTAATTATCCTTTATA
ACTGCCTTCTCGAATTTGATTGGATTGATTTATCACTTTTTTCACTTCAT
TCATCTTACGAATAGTTTAATTTCAATCGAAGAAATTCCTATCTTCCAAC
GATTTTGAGTTATCTTTCTTGTGAATATCGAAGTTCACGATTTCATTGAG
TTTTGTAGGATGTCAAAGGCCAAAATTTAATTCAAAGTAGTAGTGTGTAG
TCTAATGACTGATTTGAaatctagcctgggaatccaagctcataatctta
gaaaaacaaaaaatacctcaccccacatagttctaagattatagagcttg
gtgcaggtataTTAGTCTGGCACAAAATGTTATAAACCGCAGTCTGTGTg
cgaacccttgttgacagactttctgaattTTGGAAActcaggcaaacaca
cataatcaacttaccataaaaactctttcgcGAGCtccaaagatattcaa
aactactaaaaactatgtcaaaacatcagccacatgtatttagacttcca
gtcaacagccattttgtttctaaatgaattatgttttcattttcatttgt
tttccttttttctgcagagtcagctttttgcataaattatgcattttgat
aatttcgatgcgcgcgaaagtactgctaagtaatactgTCGCGCGGGAAG
AGGTTGTGCACGGTCCTCTCCTGGCGCGATAAgcgaatatttatttttat
gccCCAGGCGTTTAAGATCTGACCCGCCGCTAGAAGACGGAGAGGACTTG
AATGTACAGTGGAATTCAGAGTGACAGTAGAACAAAGTAGACTAGAGTTT
TTCGGCTCGTGCATATTTATTTCAATCCATCCAAATGATAAAGTAAAGTT
ACAcacaataaacaaacaaatttaaatgtcaatatttcaCCTGCGTCCAG
GCGTCGCCGCTCACTGCAGTTTATTGCGACTTGGGTTTTATTATTAACTC
TGCGCGAGAACCCCATAACTCCGCAGTTCACTCTGTTTGATTCACCACCT
GTCTCACCCAGGCACTTCCCAACCTTACGGTCCAGTCTCTAAACGACTCT
GCTTCAGCATTCTTTGTGGATGCGCATGGCAGTCAGACCGGGGTCAACGG
GGTCCACTTGTGGAACCAGGCTAACCTAGGTCTGATGGCCACGCAATCCG
TGATTCCTCAATACGTCTTGTCCGGACGAACGCTCGCTGAAGAATATCTG
AATTTCTATATCtggttgaaatatttttatctcatgcataatgcatattt
acaaacattcaaacatacaaaattctatttataaATCCCTCATGACAATA
Cgtcgaaagctggccaatcaggtcgaacctgcattgcaggaaaaaatcta
aaacaagcagcaaaaatatcataaactagactgtgaacgtCTGTGAAACG
CTTGGATTCTCAGgctttgaaaaatctaaagtctattcacgataagtctg
cactcttttttcttttacctataacttttgaaggaattcttcaatcttta
taaatttggtatcgttggagagatatttgtgagtgaaacaatttgaaata
aaaaaatcttcaaaaaaattctaaaaatgaagatgaaaatgaagaagaaa
aaaatgaagatcttgtagaaacgtgctctaactttcattttcactggaga
gattctttgatctttggaggtcatcactgtgaagaaatttcactaaaata
tttattcaatacaaagttatgatacaaagttaataagtaattgaccccaa
aaaacagcagaaaacagcgtttttagacgtcaattagcttataacttttg
actgtatgaatatttttgagaaatttttttacagtgatgacgttcgatga
tcaaggttTCACTTTAAAAgttataccttaagtggataaattttcgcgtg
tactaaTGTTCGCGAGACGAGAATTTAAAGATTccgcgtggattaaattt
cgcgaaccaaaggtctttaaaattttcgcggggattaaattttgcgaaaa
tggccttctttatttaattttgcgacTATATAAATTGTAACTAGAAAAGA
GATATGTTTTTCTGATCGAACAAAGGCAGACAAAGTCACTCAAaggcttt
caaaaaacttcaaagaaagtacTTTTAGGAGGTTACTAGAgtttataatt
gaaatgaaGAGTTGAACTCGTAATATGTTTTGATTCTAACATGTTATCTA
GATTTCGCGAACTTTTATTtttgcgattgtaaaattctaaataatttcgc
gtggactaatttttgcgaatcaAAGGCCTCCAAAATTTTCACGTGGacta
aattttgcgaaaatggccaaaattcgcgaaaaccgcgaaaattaatccac
gcgaaaatttatccacttaagggagaaaaaagagtgcacacttagcATGA
ACAACGACAAAACTTGTACAGATCTTAGCAGGCTATATTGAGCAAAGCAA
TTGAAATTTTGGGCAAGGAGTTTCTCAAACAAAGGTGGCAAAACACATGT
AATAAGGATAATGCTAATGGTAATAGAAGATACGTCAAATATCTTTCAAT
ATTTGATATTTAATACAACTCAAACTAAGGTTTTTATTCCAGGTCTTGGT
TTGCTTGTCTCCTCATTCGCTGACAGTGTTTACATTCTCTACGTCACGTT
CGGATTGTTGTTCGGATTCGGTTCCAGTCTTTGTTACAGTTGCTCTCTCT
TGATTCTGCCCCGTTATCACACAACATACTGGGCGTTGGCTCATGGCATC
GCACTAGCCGGGAACGGTTTAGGTGGCATGGGACTTTCACCGGCTAATGG
TATGCTGTTGGATTCTGTAGGCATCAAGAAAGGCTTCAGGGTATGTATGT
GTTATTTGGCACGAGTTAACGATTGCGAGTCTCGTACAAACTAGAAAGAA
AGCTCGAGGAAGAAATAGTCCTAATggtttaaatcatttttgacATGTAG
ATACCTTTCTTGGTTCGACgacaaaaatttattatttgtttaaattcaaa
tcttGAGTTCTTTTCTAAAGATGGTcatgaaaataaatatcttATAATTT
TCTACTCCAATCTTTAGATCATGGCTGCAGTGTCGTTTGGTGTTTTGTTT
ACATGTGGTTTAGTCTACGAGACACCTCCAGAGAAGGATCCtgctgaaga
agaaaatgaagaggacgatgaagaagatgtagaaagtcttaatgaagaag
acgaagaaagattattagaagaagaagTCTTCTATCATGACACAATATGG
AAGAATAAACCGCTTCTCATATTTCTTCTCTCCACATACTGCTTAAATTT
CGGATACTACGTACCTTATGTCCACTTGGTGAGTATGGTTGGTTTATAAT
CCCCTTGTGACTGGTGCACTTATTATTAACATCAGTAAAGAGATCCTTCT
ATTTGGTATAAACTTGGATCATTGCAACAAGGTATTATAGACAACTCCTT
TGATTTCCAATGGAATGGCCTGGCAAGTGTGGTAAGTATGGCTAGCCAGA
TAATCTTCTCCGTCTGGTCTGGAACCTTTCTATGCTTCTTCTCTAAACAC
TTCTGATGGTCACAGGAAATTTTGTGCTGTTGCTTTGTTCTGGAGGACTA
AAATTGTTATAAAATGTTTAATGAgttatattttgatttccaGGTAAAGT
TATCACTGGACGAGGGTGTATCGAAATCACAAGCAGACTTGTTACCAGGC
TTACTTTCTCTAGCACAGTCAGTTGGTAAAGTGTTCATCGGCAAAGTATT
CTCCTACCCTAGCGTCAACCGTATACGAGCATATCAACTCAGTTTGGTCG
CTTTATGCATCGCAACAACTTTCGTCCCAGTCTTATCAAAGTCATACCCA
GGCTTGTTAGTCTACGCAATAGCTTTTGGATTTTCTGACGGTTGCGGCCA
GGCGACGAATATGATTATTATAGGAGATTTAGCTGGTAAAGAATTACTAC
CGAAAGCTTACAGCACCTTTTTGGTATGCTCCGCTTCTGCTTTCGTGGTT
GGTCCACCAATTGCAGGTTCGTTTCCTTTTTCTTGATATCCTTTAATCTT
TAATCTCAAAAAACGACAGTAAGTCATCAGGCTTTCTTCCTCCCTTTGAA
CGTTAATCTCTTTGTTCCAggggaaatatcatttgatcgATCAACAGTTT
CCCTCCCGTCATTTTATAGCAGTTGGACACCCTCCTATCACAAAGTAGGC
TACGTCATagcttccttcgtttcgagcgtaaaactcctactctaaGGTTT
AAAAGCCTGGAgttgtctattgtgtagactaatgACAGAGCCGGTAGGAC
CTTCATTAGAAAACTTTGCTAAAAATATTGTCTTAGGTGAGAAAAACCTT
GTAATTTCACCGCCCCGTTTCCTAATTCGTTAAGACGACAGGATTGTCTT
CAACTGGTTTAGACCCACACGCTGATTATTTGTATGTCATTACTTAACTA
ATGTTTTTACTTCTTGGTTATTTGAAGGCGCTGTTTACACGGCGACTGGT
GATTACTCAATCGCTTTCTTCATGTGTGGAGCTATGGCGTTCGGCTCGGC
TGTCCTCCTCTTTCCAGTGACGTGTATACGGGACGAAGAACAATTCAAAT
ATCGAGCTaaacgaagaaaagaacgagcagaagctaaaaaattaagagaa
gaacgaaagaaaaTGGGTATGATATAtttgttcatttgttttttgattta
gTGTTTGGGATTCTCTTTTTACTCTACTAAATTAGCCTGGGTATCAAGAC
AATACACTCATCATTGTTTAAAATTGTGTCTGTGTCAGGTGGATTTCCGT
CTAAACCTGACCGGGAatgagatttttgtttattcatcaaattagaaaaa
aataaggacGGGTTTCCGTCTGAAAAGATGGGTTTCCCTGCTCCTCTTCT
AGCCTGAATAATCAGACTgaaagcttttagaaaaaactaCCTTAACATGA
AAAGTTCAAAGATGTTATACATCAGGCACTGGTGCTTTCATTGTGCAGTT
TAAGCAGTTTGAGGATTGACtcaacttttaaaatgtattttgaaTTTACT
TCCCTAATCCAGGCTTACCAGAAGAAGAAGCTCCATCTACACCAAAGGAC
CATCTGTCGGCTGACAAGATGAAAAAGATACGACAATCACAAGTCTCCCT
ACTCACACGTAGCTGGCATAGCATTGATTTCAAACAACACAAATCTAAGA
GTAAAGAAAGTATACGTAGTCGTGCTAGTAGGAGAAATGTCGATTTGAAC
GAGGTCAAAGTTGATGCTTGA Coding sequence (CDS) from alignment at sc0000359_pilon:300257..306377+ >XLOC_014488 ID=XLOC_014488|Name=XLOC_014488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3534bp|location=Sequence derived from alignment at sc0000359_pilon:300257..306377+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatcatCACGGCAGCATAGATGCTATGCACGATCAAGCCGAAGAACA
ATCCACGTCATCAACGAAGGAGAGcaaaaagaaatccaaagaaaacctaa
ACAAGGATACAGAGGACTCCACCTTAgatgataaaaacgaaaacaacaat
ctaatcaataataaggataaaaagaaatccaaaaaggataaatcCAATAC
GTCAAACAGACAACCGgtttctttcaaaacaaaatattttccatgGATTG
TTTGCGCTACAAGCTTTGTGGTCCAGTTTTTCGTGCTGGGCTTTTATAAA
GCTTTTGGTCCGGTCTATGTGAAATTGTTACAAGAAGAACCAGAGGGGTA
TGGAGGTAGCCCCGTCGCTACTTatgaatcatCACGGCAGCATAGATGCT
ATGCACGATCAAGCCGAAGAACAATCCACGTCATCAACGAAGGAGAGcaa
aaagaaatccaaagaaaacctaaACAAGGATACAGAGGACTCCACCTTAg
atgataaaaacgaaaacaacaatctaatcaataataaggataaaaagaaa
tccaaaaaggataaatcCAATACGTCAAACAGACAACCGgtttctttcaa
aacaaaatattttccatgGATTGTTTGCGCTACAAGCTTTGTGGTCCAGT
TTTTCGTGCTGGGCTTTTATAAAGCTTTTGGTCCGGTCTATGTGAAATTG
TTACAAGAAGAACCAGAGGGGTATGGAGGTAGCCCCGTCGCTACTTCATG
GGTAGCTTCACTTTCCATCAGTACATCATACCTAAGCACACCTTTATCCT
TTGAAATCATCCGAAGAATCAAGTTTCGACCCGCCATGTTGATCGGTGCT
ACGTTATCAGCATGGGTAGCTTCACTTTCCATCAGTACATCATACCTAAG
CACACCTTTATCCTTTGAAATCATCCGAAGAATCAAGTTTCGACCCGCCA
TGTTGATCGGTGCTACGTTATCAGGTCTTGGTTTGCTTGTCTCCTCATTC
GCTGACAGTGTTTACATTCTCTACGTCACGTTCGGATTGTTGTTCGGATT
CGGTTCCAGTCTTTGTTACAGTTGCTCTCTCTTGATTCTGCCCCGTTATC
ACACAACATACTGGGCGTTGGCTCATGGCATCGCACTAGCCGGGAACGGT
TTAGGTGGCATGGGACTTTCACCGGCTAATGGTATGCTGTTGGATTCTGT
AGGCATCAAGAAAGGCTTCAGGGTCTTGGTTTGCTTGTCTCCTCATTCGC
TGACAGTGTTTACATTCTCTACGTCACGTTCGGATTGTTGTTCGGATTCG
GTTCCAGTCTTTGTTACAGTTGCTCTCTCTTGATTCTGCCCCGTTATCAC
ACAACATACTGGGCGTTGGCTCATGGCATCGCACTAGCCGGGAACGGTTT
AGGTGGCATGGGACTTTCACCGGCTAATGGTATGCTGTTGGATTCTGTAG
GCATCAAGAAAGGCTTCAGGATCATGGCTGCAGTGTCGTTTGGTGTTTTG
TTTACATGTGGTTTAGTCTACGAGACACCTCCAGAGAAGGATCCtgctga
agaagaaaatgaagaggacgatgaagaagatgtagaaagtcttaatgaag
aagacgaagaaagattattagaagaagaagTCTTCTATCATGACACAATA
TGGAAGAATAAACCGCTTCTCATATTTCTTCTCTCCACATACTGCTTAAA
TTTCGGATACTACGTACCTTATGTCCACTTGATCATGGCTGCAGTGTCGT
TTGGTGTTTTGTTTACATGTGGTTTAGTCTACGAGACACCTCCAGAGAAG
GATCCtgctgaagaagaaaatgaagaggacgatgaagaagatgtagaaag
tcttaatgaagaagacgaagaaagattattagaagaagaagTCTTCTATC
ATGACACAATATGGAAGAATAAACCGCTTCTCATATTTCTTCTCTCCACA
TACTGCTTAAATTTCGGATACTACGTACCTTATGTCCACTTGGTAAAGTT
ATCACTGGACGAGGGTGTATCGAAATCACAAGCAGACTTGTTACCAGGCT
TACTTTCTCTAGCACAGTCAGTTGGTAAAGTGTTCATCGGCAAAGTATTC
TCCTACCCTAGCGTCAACCGTATACGAGCATATCAACTCAGTTTGGTCGC
TTTATGCATCGCAACAACTTTCGTCCCAGTCTTATCAAAGTCATACCCAG
GCTTGTTAGTCTACGCAATAGCTTTTGGATTTTCTGACGGTTGCGGCCAG
GCGACGAATATGATTATTATAGGAGATTTAGCTGGTAAAGAATTACTACC
GAAAGCTTACAGCACCTTTTTGGTATGCTCCGCTTCTGCTTTCGTGGTTG
GTCCACCAATTGCAGGTAAAGTTATCACTGGACGAGGGTGTATCGAAATC
ACAAGCAGACTTGTTACCAGGCTTACTTTCTCTAGCACAGTCAGTTGGTA
AAGTGTTCATCGGCAAAGTATTCTCCTACCCTAGCGTCAACCGTATACGA
GCATATCAACTCAGTTTGGTCGCTTTATGCATCGCAACAACTTTCGTCCC
AGTCTTATCAAAGTCATACCCAGGCTTGTTAGTCTACGCAATAGCTTTTG
GATTTTCTGACGGTTGCGGCCAGGCGACGAATATGATTATTATAGGAGAT
TTAGCTGGTAAAGAATTACTACCGAAAGCTTACAGCACCTTTTTGGTATG
CTCCGCTTCTGCTTTCGTGGTTGGTCCACCAATTGCAGGCGCTGTTTACA
CGGCGACTGGTGATTACTCAATCGCTTTCTTCATGTGTGGAGCTATGGCG
TTCGGCTCGGCTGTCCTCCTCTTTCCAGTGACGTGTATACGGGACGAAGA
ACAATTCAAATATCGAGCTaaacgaagaaaagaacgagcagaagctaaaa
aattaagagaagaacgaaagaaaaTGGGCGCTGTTTACACGGCGACTGGT
GATTACTCAATCGCTTTCTTCATGTGTGGAGCTATGGCGTTCGGCTCGGC
TGTCCTCCTCTTTCCAGTGACGTGTATACGGGACGAAGAACAATTCAAAT
ATCGAGCTaaacgaagaaaagaacgagcagaagctaaaaaattaagagaa
gaacgaaagaaaaTGGGCTTACCAGAAGAAGAAGCTCCATCTACACCAAA
GGACCATCTGTCGGCTGACAAGATGAAAAAGATACGACAATCACAAGTCT
CCCTACTCACACGTAGCTGGCATAGCATTGATTTCAAACAACACAAATCT
AAGAGTAAAGAAAGTATACGTAGTCGTGCTAGTAGGAGAAATGTCGATTT
GAACGAGGTCAAAGTTGATGCTTGAGCTTACCAGAAGAAGAAGCTCCATC
TACACCAAAGGACCATCTGTCGGCTGACAAGATGAAAAAGATACGACAAT
CACAAGTCTCCCTACTCACACGTAGCTGGCATAGCATTGATTTCAAACAA
CACAAATCTAAGAGTAAAGAAAGTATACGTAGTCGTGCTAGTAGGAGAAA
TGTCGATTTGAACGAGGTCAAAGTTGATGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359_pilon | genome | sc0000359_pilon:300257..306377 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1561-1767:5915 |
| Aaloc | 1372-1557:5330 |
| Aaloc | 997-1368:4494 |
| Aaloc | 736-996:3918 |
| Aaloc | 490-735:3445 |
| Aaloc | 376-486:712 |
| Aaloc | 1-372:1 |
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