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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000359_pilon:287231..290059+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014487 ID=XLOC_014487|Name=XLOC_014487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2829bp|location=Sequence derived from alignment at sc0000359_pilon:287231..290059+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAACAGTTCTGATGTAGATTCAAATGATaatgaaactttcaaaga
aGAGGAGGCAGCAACAAACGAAAGTGAGCCAGATGAAGTTCCATCACAAG
CAGTAAATCTGAACAATCCAAAGGCAATGAAGAAACTATTACAAATGTCT
ACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATATTGTTTTGAATC
AAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAAGCTTATTGATA
AGATCAAAGAAAACCCATGTTTGTACGATCATTCAACCTTTGGGTGGCGC
TaccctgaaaacaaaaaagaagtttgGGAGAGAATTGGGAAAGAGCTTCA
AGTTGAGCACAGTGAGTTTTAATGATGATTgggggccgtcgacaaacgat
tttccttttttttaacggcttctggccgtaaggggtgggagggggtcact
gcaatgctgttaaaaaagttttataaaaaaggaaagtctcacttacaaat
ttcatcagtcTAAAAAGTAGAAACATGTAAAGAAAGGCTAAGACCAAAGC
AACCACACGACATTCACCTTATTCCCGGTCACCAATTAATACTTCGACAA
GAAAAATGACTGGTCACGTGACGAAAGTCGGCAATTTTTCCCTCCGCCTC
AGTTGACtccttgctccacccatcccgcCCTGACTTGCTGCGGGGGttgg
agtttcaaaattgaaaggtcacggctcaaaaccacatgttttttccgtgc
gaaaagaagaactttgaggattacgaattgaaagaacatggcggccatgg
accagtgaaagtatttacttttgaagaattttcttggCCGCTAAGACgta
gggggggagggggtctgaaccttaacggcctcaggccgttaaaaaaaagg
aaaatcgtttgtcgacggccccttgATGATATGATCACTTGGTGATATAA
TATAAAATTATCCTTGattttatgacactcaattacattttatttttaca
attttattctatttttaagGAAGTGTACAGTACAGACTATGTGCAAACTT
AAAAAGGTCATTTTGTTTTGCATAAGATTtccatttctgcactaagattc
ctcTGCCACTTTTCTACCGAGAAAAGACCCATGGTGGCCAGCGACCCTTG
AGTTCCTTAAAATCCTTGAAACGTCCTTGATTTTATTTCTACCcttgaaa
atttccttgaaaaccttgaaaatatgATGATTTTCAGTAGACCCTTGAGC
TACCATAAGTtagtctaatgttgacatccctcttctaattccgacaccct
tcttaaaggtcagaatcactgatagaaaaaagatttatccctCCCTGATT
GCTAAGCaaaaaaaTTGGTTTCAATCGGCGATTTCGACCTTCCTATTATC
AATTTCTATGGGGGACCGTTTCTATCTCCAAAGAaagtgtcgaaattaga
agagggatgtcgacattagaccaacttacagtatgaAATTTACagccttg
aaacccttgaaattcAGAAACCTGGAAAAGATTTCAGTTTATTACTAAGA
ACCTTTCAAATGCAAAATTTTCCCCACTTTGTGGGGATAAAAGTATATAA
GCGTACAAGGAAATCAAGCTATAAAGAAAGCTAGAAAATAAACTAACGCT
ATTGTTTTGGACAGATGCACGGTGACAGGAGGGGTCAGGGGTGCCAAGGC
ttcccagcggagctttttcgAGGGGGCCAAAACATAGGAAAATCCTAGCT
TAGACAGCGCTTTGAAACGTGAAAAGGCGCTCATTTATAAAGAAAATTGC
AaactttattaaattattttaagaaaaatgtgACAAGTGCAGGATGGGAA
TCTAATGCAAAACGACGTTAGTaaggatgtcatgttgaataattaaaaat
tccaacatcaaaacaatgataataaATAAGTGTACGCTGTAATAATCATA
CACTAATGTGTCATTGTTTCAATGCTGGACATCCTGACTAGCAAAATGTC
TATGCTTAgtgcctttttttaatttttaactaagatctccaattttattt
tctcaatctcttttattttagtaaccctagaaaaagaattcaagaaattg
aaagatAATTACCGTAAATGCTTGAAACGTCGCTcaaaagctgaaaagtc
aaaaaatcaaaacaaacagttGGCaacttgtaatttctttgaaGAACTAT
CATTTCTTAAAGGTCACTTTCCACCTGCAAGTGATTTAGAAGTTAGAACT
GAATCTATTCAAATACCCCAACCATCACAAAGGCAAGCAAGAACTAAAAC
ACATACAAAAAAGTCTTTAACTTCTTtatcaatgaaaaagttttctaTCC
AAGAGCTGAATCCAAATGATATATCACAAACAGATATTGCACTAATGTCT
ACAAATGCATCAGAAAACAATGTAACTGCAAACAATCCACAGTCACTTAC
TCCTACCAAAATTGATCAAGTTGGAGTTGGAGAGCTGGAAACAACTAAAA
TGATAACTAGTGATAGTTCATTACACTCCACAAGTTCTTTTGATATTCAA
TCTGGACAGGCTGCAACCCCAAATGACAATACTCAGCTGTTGAATGTGAG
GTACTTTCCAAGTGGTAAATTACCTAATGGTATGAATTCTACACATGAAC
CACcggaaaagaaacataaactcCACAATGGTAATATGATTGAAGCAGAC
CCAAATATAAAAGACACACACcaacttttttgtgaaagctTAGTTGAACC
ATTGCGTAGTCTTTCACCAAAGAAAAGTAAActtgcaaaaatgaaaatta
tgcaAATATTATACGAGCTGGAAGAATAG Coding sequence (CDS) from alignment at sc0000359_pilon:287231..290059+ >XLOC_014487 ID=XLOC_014487|Name=XLOC_014487|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2238bp|location=Sequence derived from alignment at sc0000359_pilon:287231..290059+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAACAGTTCTGATGTAGATTCAAATGATaatgaaactttcaaaga
aGAGGAGGCAGCAACAAACGAAAGTGAGCCAGATGAAGTTCCATCACAAG
CAGTAAATCTGAACAATCCAAAGGCAATGAAGAAACTATTACAAATGTCT
ACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATATTGTTTTGAATC
AAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAAGCTTATTGATA
AGATCAAAGAAAACCCATGTTTGTACGATCATTCAACCTTTGGGTGGCGC
TaccctgaaaacaaaaaagaagtttgGGAGAGAATTGGGAAAGAGCTTCA
AGTTGAGCACAATGGAGAACAGTTCTGATGTAGATTCAAATGATaatgaa
actttcaaagaaGAGGAGGCAGCAACAAACGAAAGTGAGCCAGATGAAGT
TCCATCACAAGCAGTAAATCTGAACAATCCAAAGGCAATGAAGAAACTAT
TACAAATGTCTACTCCAAGCCCACAAGAGCTTGACCCAGATGAAGAATAT
TGTTTTGAATCAAGTACACTTTATGAAGATAAAAATGCGTTCATTTCAAA
GCTTATTGATAAGATCAAAGAAAACCCATGTTTGTACGATCATTCAACCT
TTGGGTGGCGCTaccctgaaaacaaaaaagaagtttgGGAGAGAATTGGG
AAAGAGCTTCAAGTTGAGCACAtaaccctagaaaaagaattcaagaaatt
gaaagatAATTACCGTAAATGCTTGAAACGTCGCTcaaaagctgaaaagt
caaaaaatcaaaacaaacagttGGCaacttgtaatttctttgaaGAACTA
TCATTTCTTAAAGGTCACTTTCCACCTGCAAGTGATTTAGAAGTTAGAAC
TGAATCTATTCAAATACCCCAACCATCACAAAGGCAAGCAAGAACTAAAA
CACATACAAAAAAGTCTTTAACTTCTTtatcaatgaaaaagttttctaTC
CAAGAGCTGAATCCAAATGATATATCACAAACAGATATTGCACTAATGTC
TACAAATGCATCAGAAAACAATGTAACTGCAAACAATCCACAGTCACTTA
CTCCTACCAAAATTGATCAAGTTGGAGTTGGAGAGCTGGAAACAACTAAA
ATGATAACTAGTGATAGTTCATTACACTCCACAAGTTCTTTTGATATTCA
ATCTGGACAGGCTGCAACCCCAAATGACAATACTCAGCTGTTGAATGTGA
GGTACTTTCCAAGTGGTAAATTACCTAATGGTATGAATTCTACACATGAA
CCACcggaaaagaaacataaactcCACAATGGTAATATGATTGAAGCAGA
CCCAAATATAAAAGACACACACcaacttttttgtgaaagctTAGTTGAAC
CATTGCGTAGTCTTTCACCAAAGAAAAGTAAActtgcaaaaatgaaaatt
atgcaAATATTATACGAGCTGGAAGAATAGtaaccctagaaaaagaattc
aagaaattgaaagatAATTACCGTAAATGCTTGAAACGTCGCTcaaaagc
tgaaaagtcaaaaaatcaaaacaaacagttGGCaacttgtaatttctttg
aaGAACTATCATTTCTTAAAGGTCACTTTCCACCTGCAAGTGATTTAGAA
GTTAGAACTGAATCTATTCAAATACCCCAACCATCACAAAGGCAAGCAAG
AACTAAAACACATACAAAAAAGTCTTTAACTTCTTtatcaatgaaaaagt
tttctaTCCAAGAGCTGAATCCAAATGATATATCACAAACAGATATTGCA
CTAATGTCTACAAATGCATCAGAAAACAATGTAACTGCAAACAATCCACA
GTCACTTACTCCTACCAAAATTGATCAAGTTGGAGTTGGAGAGCTGGAAA
CAACTAAAATGATAACTAGTGATAGTTCATTACACTCCACAAGTTCTTTT
GATATTCAATCTGGACAGGCTGCAACCCCAAATGACAATACTCAGCTGTT
GAATGTGAGGTACTTTCCAAGTGGTAAATTACCTAATGGTATGAATTCTA
CACATGAACCACcggaaaagaaacataaactcCACAATGGTAATATGATT
GAAGCAGACCCAAATATAAAAGACACACACcaacttttttgtgaaagctT
AGTTGAACCATTGCGTAGTCTTTCACCAAAGAAAAGTAAActtgcaaaaa
tgaaaattatgcaAATATTATACGAGCTGGAAGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359_pilon | genome | sc0000359_pilon:287231..290059 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 364-1119:2074 |
| Aaloc | 1-360:1 |
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