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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:51145..58968+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014448 ID=XLOC_014448|Name=XLOC_014448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7824bp|location=Sequence derived from alignment at sc0000098_pilon:51145..58968+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTGCTTGGGAAAGACTTGTGCGCATGTGCTACAACGGGTTCagg
tataataataataatagtaaatgtataagaatatgatgaaataaatacga
agtttttcaaaagttttcttcaattttcctctttcttttgtATTCCTTTG
ATAATCATAACAATGAAATTCTAGAGAAATAATAATTATTTATCACCGAA
TGTATAGAAGCATAATTATAATGTATACTATTTTTGCTCAGAAATAGACT
GCATTTCCCTTTTTATAAGACTTTGATCAATTTAGCTTTTTGATTAGACT
TTAAAATGAATTATAAGCATACTTTTGtagttcaatattttctttttagg
aAAGACCGCTGCTTTTATGCTCCCCATTTTGGAACGATTGATTTTTAAAC
CAAAGAAAACAATAGTATCACGTGTGCTTGTCCTCGTACCAACAAGAGAA
TTGGCCATACaggtttttatgattttataattttactaCACTTTTATATA
TTTCAAATCTTAGTCTCATAAGATTTAAGAAAAACTccattttttctcaa
gatttttttcaattctcatAATTACAGCCTGGTTGTTTTGATACACAATC
ATTAAACACTCTTGGTGAATTGATTTACAAAAACATTTCATCATTAGAAA
GTGTTGGGTGGTGATATGGCTCAGACCACATTCATGTGTTATTGTTCTGA
AATGGATTTAAAGCTACAAATATATCGGCCAACTGTTGAATTATCGTCTT
TTTTAACCAACTGTGGCTTGTTTTGGAAGGGTACGAAACAGTAGAGCGTG
GACAAATATTTTTGTCGCCTGTCACCAGACAATTCCACAATGtcaaaaga
atccaatcaaACCCCATTACTATGCACTCTTTCTATTTAAGGTCCATTCA
GTGAGCCAGTCTCTCGCAAAGTATACTGACGTTACATTTTGTTTGGCTGC
aggtaaattttatatttttcctgTGCATAAGCTCTAAGCTAAGCTCAAAA
CTATGATACTTAGATAGATGAGCCCTACATTTTCAGGTACATAACTTATT
GATTTTGATCAAGTAATGGCCAGGTTAAGAttcaatttttcagattcaCT
ACTTGACCAAATTCTATAAGGTATTTAGTTTCTAGTAACGAGTAAAGACA
AAAATGTTGATAACAGACTATTTCAATGGAAAATTTAATTAAGAATTAAA
AACCTGATCCCCCCAGGAAAAGACTTTCACTTCTTTGGTGGAATCTGCCC
CATATTTTTCTCCCCCTCCcctcttttgacaaaaaaaaatcaaaaatatc
ccCAGCAGAAAGGGGAGAACTATTTTTGACCTGAGTTGAACATCATTCAT
TTTCCAGGTGGGTTGGACTTGAAGGTACAGGTGGCGGTTTTACGAAGGAA
CCCTGATATTATCATTGCTACACCAGGACGTCTTATTGATCATTTACATA
ATACACCATCCTTCGATCTTCAAACCATCGAAATTTTGGTACTTGACGAA
GCTGACaggtgagattttttttcactttctaaTTGAACTACTGATTGTTC
TATTATTGTTTCTTTTAGGACTGATACAATTGTTTTAGTTTAGAGATTTT
TCAGGTTTTACCAAAGTTACGCAGTTCTTAAGAAAAATCCGCCATGGGAG
GAAACGCTCGAATTTGTAGAGCCATCACATCAACCACTAGTTCGAGTGAA
AATATTTGCTATAATACAACATTTGGGTATTTTAgggaaacaaaaatctt
tgACAGTGCAGCCAGTAACTTAAATCATAAGacggtttcttttttttaga
atgtTGGAAGAGCATTTCAAGGACCAGATGCAGGAGTTGATTCGATTGTG
TCCACGTGGTCGCCAAACTATGTTATTCTCAGCTACTATGACTGAGGAGG
TAAACTCCTGTATATTATGCTTCTCTAGTGAAGAACGTTCTGCGAggaaa
ctataaaaaaattaataaaatctacaaatcttatttttgtaaataaactt
tCTTTCAGGTACAAGAACTTATCTCATTATCGCTGAACCAACCCATCAAA
CTCTTCGTTAATCAAAATACAGATGTTGCTAAAAGTCTACACCAAGAGTT
CATGAGGATACGAACCAACCGAGAATATGATCGCCTTTCTATTGTGGCAG
GTTAGATGgttatattttttttagcatTCCGCAACATTCCCATGGTCTTG
TGAATAATATTAGTCATCGTTTTATCTGGAATCGCCAAATAAAACGATGC
GATTTTAACCCTTTTTTATCGTACATGACATGGttttttttGCGTCAGTA
CTTAGTATTTTGCTCTTTATAGCATTGTGTTGTCGCTCATTTCATGATCA
CACGTTGGTGTTTCTGCAAACCAAACGTTTGGCACATAAGTTGAGAATCG
TTCTCGGTCTTTTTGGATTGAAAGTTGGTGAACTTCATGGCGATCTTACG
CAGTTGCAGGTTTGAATTTAAACGTTCTTTAAGCTATTAATGTATATAAC
TCGCACTCGACACTATCGAAAAGTTCTCTATTTTTGGTTTAGtttttttt
CGACTGTTTATAATTTTAGCGACACTTTAGTTTTAATGAAACGGTAGGAA
TgattttttgtaacttttttgtcATCTCAGCATCGCAATTCTTTTCTCTT
TCAGCGTTTGGAATCTCTGGAGAAGTTCAAGAATAATGACGTGGATATTT
TGGTGGCCACTGATCTAGCTGCTCGTGGCTTAGATATCCCTCATGTTAAA
ACAGTAAGCTATTTATCTCGTGAAAAACCCttctttaattaatttttctt
agTGTAATATTTCACCGACTTTCATAATGATGAACTTATAAAGCTCCTCA
CTGAattcaaaaatggaaaatgtccgtatatatttatttttcattataat
TCGAACCGATTTGTACAACACTATTTTGACTTTCCGATTAAAATGCATCT
GTCTCAGATTTATAATAGGGAAACGAATTACTGCTAAGTGTATATTAATT
TTTATCCTGTTCACAGGTTATCTCTTTCAATCTACCAACAACAATCAAAA
GTTATATCCATCGTGTTGGGAGGACAGCTCGTGCTGGAAAAGCAGGGAGG
TGGGTTGCTCATTCTTATCTTTTTTACGAAAACAATCCTCTTTTGTTCTT
ATGCATGACAGTTAATTGTTAATTTTTAAATTATCTGTTGATTCTGTTAA
GATGTGGGGCTTCCTTAGTTTCCGAATAACCGGAATACTCTTTCATGAAA
AAATCCTTCGAAATCCTTCCTTACCTTTTATTCAATTCTCAAACCAGATA
GACATTCTCGTTTTCTTCGCTTCAAgttatttataaaataaaataatatc
atACTTCAGATCAATAACACTAGTTGGAGAAAAAGAGCGCAAAATGTTGA
AAGATATCGTCAAAAACTCAAATATCCCGGTTAAAAATCGTCTCATGTCA
CCAGGTAAAGAAATATTTCGtatggggccgtccacatagtacgtacgcac
ttaaatgtcgaaaatcgagtacccctcctccctggtaagtacgtactttt
catTCACCCTCCCCcgtcggttgaagaaaatttcgaattcaaatcgtttg
gttcggacctttactTCACACTTGAAGCTCAATGTTTTTAAGAAACGTTt
acttttccttgatgcgtataagaagtgtaaaagtcgacaaaaaaacaagc
aacaaagggctatgaaaaagcTTTTTCTCTCTCTGCGttcgtacattttc
ctttgacccctcccctccccctgtacttGCGtccgcttttgagaagaccc
ttTAGTGCGTACGTATTGGAAGTGTAATGAAACCCTTTGTTATCAATAAA
CAGGGAAGTTAACAAAAGCCACACAGTTATATTCTAATTCACTATGTTGT
TCTGTTTTCTATTGAGTTGATTTTGAGTTTACCTTTGCGTAATCAAGATA
GGTAGGCGACGCGATCAACCTCCTACCACAGTCGCCGTCACACTTAGCTA
TCTAAAGACCTTGAATCGCTACGGACTAGCTTCTTATTCTTTCCAACTTT
GTAGATATAACGATTTATCTAAAGCCTTTCAATATTCTAAACTTAAAGGA
AAAACGATGGTTAAAATCACCAGAATGGTGTAATTGAGATTAAACTAACA
ACTAGGCTTCTGCtaatcctctagcgaaaagagtttcttatataggatgt
atatctatagaggtctgcgattcagactaactcAGAACCTCGCCATCTCT
TCGTAGACGTGATTGCAAAATACaagaagaagttggaagaaatggagaaa
gatatcaaagatattttgaaacaagaagaagaggagaaaCAGGTTCCAAA
CTTATCACCCCTACAGCTTTTCCTTCCATGAACTTAAAACTTTTCTGTGT
TTAATTCAAATCAGGATTATATCCGTATTACATGCAACATCTCATGACTT
CACGTCACTTTTAAAAAAGATGATTGGTTGTAGGCTTGCTGTATTGGGTG
CAAACTGAATAAAAAGCTACATAATCTCACGAAGGCACTGTAGTGGTGCC
TATCATGAATATCCCCATTTTAAAGTTCTTAAAAGCTAAAGAACGAATAA
AAACGAAGTGTGTACGATTTATTATGTACCGTCGTTTTTCATGAGATATC
ACTTTCTTTGCCACAGTTTCCATTACTTCTTTTCTtgggaaaaagaccag
gacccTGGGTAGCTGTAAAAATGATCATTTACCGTTCGCTGATTGCTTTC
GACTCTGAATCTCacgaaaattttcactttcCGTTTCAGATACGAATTGG
AGAGATGCAAGCGAACAAAGCACGAAATTTGGTCATTCACAACGATGAAA
TTATGAGTCGACCTGCAAGAACATTCATCAAACAAAAGAAGATTGACAGT
AAGATAATAATGACTTTATTTTTCGTTGCATTCCCATATCTTtcttaatt
aattaatttcatcTGTAGTGTTCACAGTACTTCATACGTATTTAAAAAAT
GGGATTTCTATCTTACAATTAAGCAGATTTTACTTTGAACACTTTCGAAT
ACCAATTTTCTTACTTTAAGTCTTTTCGTATTTTTTGAGCCCTAGTTATG
ATATTTTGAGATTTGTctgtttgttattattttccaGATAAAAAAGGAGA
TCATAATAAGAAGCCAAAGGTACTGTACTgctgtttttgttcttttttaa
tccgaaattgaattttgaaaattttcaaaagtattttcttAATTACGAAT
CCATAAGCCAagtactctaggggctgagttaggtctcgtatgcacATCGG
AAATTTCCATAATTTCCATTAACTTTAAACAtaaacatattatataccaa
tcgatcacaaattttatgctgattaagaaaaaggtcagaatcatggtctg
aaaatttcgttatctggagatatgaagcaatTTCGATTTCGAtcttttga
aatgactacttttggttccagatttgcgtggctgtaacatttgattggct
tacttaatttacttgaaattttcggagggtctttcctaccgttcaaataa
taaaattcaggaaaatttatttttctacataaatttcgaaatccataatg
gcgaaatttgttttttcaagcaagagggctaaaaagggttgaaaatctaa
aatccgccattatggaaatttgtgcctgatccaaataacgccacacacgt
tttctgactcttcaaggactatactttcatgatcaaaagaaaaaatgact
atacgccgatgcgcatacgggacctaactcagcccctagagtaaaggcag
aaaataataactttaaaaacacatttacattatttttaataaaaaataaa
aagcttttcgTAAGCCATCAAGTATGAAATTAAACTGATGTATTGAAAAA
GATATTTATCGCGTATACACTATTTGCAACTTTTGGATAATTACATGAGA
AAAAGCGCCTAGGGAATAAAACAATAGTGTAGTAAAATTCTGATAAGTGG
TAAACTGATTCGAGACAAAGCTAAAGAAAAGAATAGCAATTAGGATTATT
AATTTTACTAAGTTACTGTTTTATTTCCTAGAGCTTCTCTCCTGTTATAA
ACCTCTTCTCACAGACAGGGtagaatttttcagccagtgggggtaaaaat
gacGGACAGAAACTCAATGGGGGTTGATATtctcatgttttttatggctg
gggatagGAAAAATAGAATAATATTTTGTTGTGAGGATTGatatatttga
ttattttccgTGGAAACAAAATTTAAGGATAATTTTCTACTGGGGACGAT
ATatcggccaatttttccagtgggaaggagtCCCAGTGGATGGGGGTGTT
CTAAAAatcttccagtgggaaggggttctAGTGATTCTATGAGAAGGGAG
TGTTGTAATTGAACAAGTGAATAAGAAATAAAGAATAGATGTTTTCAATT
TAAAACTTGATGTTGTAAGGTTGTCTtacaaaaagtttcttaaacGTGTT
ACCATTTTAACAATTTCTTCTCGACTAATTTTAATGATTTGCAGGTGGAA
TTTACAGAGGAAGAGAAAAAATGTcggaaatttcaagaatttcaagCTCG
TCAAATGAAGCGTGATAAAAAACCGAAACGAAAACGCGCGTACGAAGAGG
ACGACCACGATAATAGTAGGAGTAAAGGAAAAGGTTTGCTACTAGGCTAT
TTTGTTCTTATCTTTCATAATAGGAATTATATAAGTTTTGATAACGGTTG
CGATAACCTCTCACACTTTATAAAGCTGTTAAAAGTCTCAATAGAGACAG
GAGTTTGATGTTATTATATCAGAGATGTGTTTACATGAGTTTGATGTACT
AACAAGCAAGAACTTTGTATCTCAAGATGACTATTTGATTCTTTCATGTC
TATGTTACAACTGTGACTTTAAATTTCTCGACAGGTTCGAAGAAAGCGAG
GATCGTAGCATCGGGGTCCTCATTCGATCATGATCTAACAGATGTCAGTC
GTAGGAAACTCAAGTCATTACGATCTAACCAAACACAACAaccgaaaaag
aaaatgaaaaataactcgaaaacaaGGTATGAATGAGTGGCTTTGATTTT
TATCCCATATATTCACAAATACTATTCCAACTGAATGATACtctaaataa
gtttgagtttatcgacccagtgatattcatattggaagtttccCATCATC
GGGAAATGTAGAGGATGTTCCCTCCACTATTTTTACTAGGACCTTCTGAT
TAACAATAATTATCAAGTGCAATTTCCTTACAAGGTGTGAATCCCCATGT
TAGGTGTAAGGTAAATTATCTCTTGAATTTATGAGATTACTCATTACTCT
GATTTCCTTCTCTGTCTGGATGTTAGGAACCCAAATATTGGGTATGTATG
AAATGCTGCTAATGTGATCCTTATCCATTAAGGAATGAATCGTCTCTTTT
ATCTGGAGAAAACATGGGTACCCTTTTACTTGAAACTAATATGTAAAAGG
ACtaagagtctacttctggctgaactttggtttttaataatttttgatgg
CGATAAGTCCAGTGTGACagacttttttgaaagaaaaacatcaaaGTTCC
AGTTAACAAAAAATACTTGGGAGTTAAAGAATATATTCAAGCACATTCAG
AATGGAAAACCAatatgtataccaaattttaaccGCACTATCTGAAAGCG
TTAAGTGGACCTCAGAAATACAGAGCTGTTATCAGACTAATATTGCAATA
TTTGAGATGAATTTATACAAACTTTACCTgaagatcttcctttttttcgt
TTCAGACACAAGAAGCGGAAGTGA Coding sequence (CDS) from alignment at sc0000098_pilon:51145..58968+ >XLOC_014448 ID=XLOC_014448|Name=XLOC_014448|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3114bp|location=Sequence derived from alignment at sc0000098_pilon:51145..58968+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTTGCTTGGGAAAGACTTGTGCGCATGTGCTACAACGGGTTCagA
TGGCTTTGCTTGGGAAAGACTTGTGCGCATGTGCTACAACGGGTTCagga
AAGACCGCTGCTTTTATGCTCCCCATTTTGGAACGATTGATTTTTAAACC
AAAGAAAACAATAGTATCACGTGTGCTTGTCCTCGTACCAACAAGAGAAT
TGGCCATACaggaAAGACCGCTGCTTTTATGCTCCCCATTTTGGAACGAT
TGATTTTTAAACCAAAGAAAACAATAGTATCACGTGTGCTTGTCCTCGTA
CCAACAAGAGAATTGGCCATACagGTCCATTCAGTGAGCCAGTCTCTCGC
AAAGTATACTGACGTTACATTTTGTTTGGCTGCagGTCCATTCAGTGAGC
CAGTCTCTCGCAAAGTATACTGACGTTACATTTTGTTTGGCTGCagGTGG
GTTGGACTTGAAGGTACAGGTGGCGGTTTTACGAAGGAACCCTGATATTA
TCATTGCTACACCAGGACGTCTTATTGATCATTTACATAATACACCATCC
TTCGATCTTCAAACCATCGAAATTTTGGTACTTGACGAAGCTGACagGTG
GGTTGGACTTGAAGGTACAGGTGGCGGTTTTACGAAGGAACCCTGATATT
ATCATTGCTACACCAGGACGTCTTATTGATCATTTACATAATACACCATC
CTTCGATCTTCAAACCATCGAAATTTTGGTACTTGACGAAGCTGACagaa
tgtTGGAAGAGCATTTCAAGGACCAGATGCAGGAGTTGATTCGATTGTGT
CCACGTGGTCGCCAAACTATGTTATTCTCAGCTACTATGACTGAGGAGaa
tgtTGGAAGAGCATTTCAAGGACCAGATGCAGGAGTTGATTCGATTGTGT
CCACGTGGTCGCCAAACTATGTTATTCTCAGCTACTATGACTGAGGAGGT
ACAAGAACTTATCTCATTATCGCTGAACCAACCCATCAAACTCTTCGTTA
ATCAAAATACAGATGTTGCTAAAAGTCTACACCAAGAGTTCATGAGGATA
CGAACCAACCGAGAATATGATCGCCTTTCTATTGTGGCAGGTACAAGAAC
TTATCTCATTATCGCTGAACCAACCCATCAAACTCTTCGTTAATCAAAAT
ACAGATGTTGCTAAAAGTCTACACCAAGAGTTCATGAGGATACGAACCAA
CCGAGAATATGATCGCCTTTCTATTGTGGCAGCATTGTGTTGTCGCTCAT
TTCATGATCACACGTTGGTGTTTCTGCAAACCAAACGTTTGGCACATAAG
TTGAGAATCGTTCTCGGTCTTTTTGGATTGAAAGTTGGTGAACTTCATGG
CGATCTTACGCAGTTGCAGCATTGTGTTGTCGCTCATTTCATGATCACAC
GTTGGTGTTTCTGCAAACCAAACGTTTGGCACATAAGTTGAGAATCGTTC
TCGGTCTTTTTGGATTGAAAGTTGGTGAACTTCATGGCGATCTTACGCAG
TTGCAGCGTTTGGAATCTCTGGAGAAGTTCAAGAATAATGACGTGGATAT
TTTGGTGGCCACTGATCTAGCTGCTCGTGGCTTAGATATCCCTCATGTTA
AAACACGTTTGGAATCTCTGGAGAAGTTCAAGAATAATGACGTGGATATT
TTGGTGGCCACTGATCTAGCTGCTCGTGGCTTAGATATCCCTCATGTTAA
AACAGTTATCTCTTTCAATCTACCAACAACAATCAAAAGTTATATCCATC
GTGTTGGGAGGACAGCTCGTGCTGGAAAAGCAGGGAGGTTATCTCTTTCA
ATCTACCAACAACAATCAAAAGTTATATCCATCGTGTTGGGAGGACAGCT
CGTGCTGGAAAAGCAGGGAGATCAATAACACTAGTTGGAGAAAAAGAGCG
CAAAATGTTGAAAGATATCGTCAAAAACTCAAATATCCCGGTTAAAAATC
GTCTCATGTCACCAGATCAATAACACTAGTTGGAGAAAAAGAGCGCAAAA
TGTTGAAAGATATCGTCAAAAACTCAAATATCCCGGTTAAAAATCGTCTC
ATGTCACCAGACGTGATTGCAAAATACaagaagaagttggaagaaatgga
gaaagatatcaaagatattttgaaacaagaagaagaggagaaaCAGACGT
GATTGCAAAATACaagaagaagttggaagaaatggagaaagatatcaaag
atattttgaaacaagaagaagaggagaaaCAGATACGAATTGGAGAGATG
CAAGCGAACAAAGCACGAAATTTGGTCATTCACAACGATGAAATTATGAG
TCGACCTGCAAGAACATTCATCAAACAAAAGAAGATTGACAATACGAATT
GGAGAGATGCAAGCGAACAAAGCACGAAATTTGGTCATTCACAACGATGA
AATTATGAGTCGACCTGCAAGAACATTCATCAAACAAAAGAAGATTGACA
ATAAAAAAGGAGATCATAATAAGAAGCCAAAGATAAAAAAGGAGATCATA
ATAAGAAGCCAAAGGTGGAATTTACAGAGGAAGAGAAAAAATGTcggaaa
tttcaagaatttcaagCTCGTCAAATGAAGCGTGATAAAAAACCGAAACG
AAAACGCGCGTACGAAGAGGACGACCACGATAATAGTAGGAGTAAAGGAA
AAGGTGGAATTTACAGAGGAAGAGAAAAAATGTcggaaatttcaagaatt
tcaagCTCGTCAAATGAAGCGTGATAAAAAACCGAAACGAAAACGCGCGT
ACGAAGAGGACGACCACGATAATAGTAGGAGTAAAGGAAAAGGTTCGAAG
AAAGCGAGGATCGTAGCATCGGGGTCCTCATTCGATCATGATCTAACAGA
TGTCAGTCGTAGGAAACTCAAGTCATTACGATCTAACCAAACACAACAac
cgaaaaagaaaatgaaaaataactcgaaaacaaGGTTCGAAGAAAGCGAG
GATCGTAGCATCGGGGTCCTCATTCGATCATGATCTAACAGATGTCAGTC
GTAGGAAACTCAAGTCATTACGATCTAACCAAACACAACAaccgaaaaag
aaaatgaaaaataactcgaaaacaaGACACAAGAAGCGGAAGTGAACACA
AGAAGCGGAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:51145..58968 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1540-1557:7807 |
| Aaloc | 1399-1536:6937 |
| Aaloc | 1258-1395:6545 |
| Aaloc | 1228-1257:5140 |
| Aaloc | 1117-1224:4790 |
| Aaloc | 1033-1116:4259 |
| Aaloc | 937-1029:3361 |
| Aaloc | 853-933:3017 |
| Aaloc | 754-852:2655 |
| Aaloc | 619-753:2325 |
| Aaloc | 475-615:2009 |
| Aaloc | 376-474:1801 |
| Aaloc | 226-372:1360 |
| Aaloc | 163-222:892 |
| Aaloc | 52-162:352 |
| Aaloc | 1-48:1 |
|
