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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000344_pilon:238337..244913- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014433 ID=XLOC_014433|Name=XLOC_014433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6577bp|location=Sequence derived from alignment at sc0000344_pilon:238337..244913- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAATGTTTCTTGTATTACTGATTTTTGGGCAGAATGGATTAATCAG
CACAGTTTACACAAATTACAAAGAAGATTTGGGGAATGGTTTCGATTTGG
AGCACTTTCAAACATTTGATAAAGTAAATTCTTCTCGTTTCTTCAGCTAC
ACGCTATTTTTTTAATTAGAACAATTTCAACACTGAGGCTCAGAAAGCCA
AAAATAAGCCAAACTTTCGATTCAAGCCTAAAACCATGCTAGACAATCAG
TGGCGGCCTGGCAGGGGGTGCAGGCTGTACAGTGCACCACCCAGAAAGAT
CGACGAGGGGTGCCAAAAGAGCTTTTCAAGGGCGCGCCAAAATTTTATTG
ATGTTTAATTGGGCGACTTGGCGCCCTTCGACAAATTTATAACGCCTTCT
ATAAGTGCAATATTAATTTTTTCGCCTGCGCTTCGTTTTATTTTACGCTC
TTGCATCCTTTCTCTTGACTTTCTTAAAAACTACTCTCAACATTGAATCG
CGAAAAGTCAAAGCAAAAGAAGTGTTGTGAATTCACTAGGGGTTAAAAAG
GATGCTCACCTTCAAAAAGTCAGACCAGCGAGTAAAGTAAGACCAGCGAG
TAAAATAAGACCAGCGGCGCAAAAGTTTTAAGATTATTAGGTAATTTTCC
TAATAAAGTTTTAGAAAACAAAATTATAGACCAAATCGACTTGCTAGGTA
TAAAATTTCCATTTCAAGTATCAAAAGCTCATGTTTTTTATGGCACCATT
TTTTTGGTGCTAAATCGGTATAAGATAAATCGATAAATTGAGGCATTTTT
AGACATTTTTCCTTGTTCAGAAAACTATGACATTTCAAATTATAACTAGG
AAATAGATATCAAGTTATCATTACTACCACCTTCGTATAAATAAAAGTTT
TTTAACTCTGGGCGTTACTTTCAACCAGTCACGGCTCTTACAGTTCAATA
TTTCCACTTAATGATGGAGGGCGCAAGTAAGGATAAAAGTACCAGGGGCG
CCAATTTCATAGTTTGCACCATCAAGAAAATTAAGCCAGGCCGCTACTGA
AAGACAATAGCCTCTAGCCAAAAAAGACTAGATAAACTTTCACATTGATA
TTTTATATTTTACCCACATAACTGTTCTTGTGTTCAGTGAGACAGTGTTT
TTGAAGGCCCACATTAACCATTTATCATTCGATTGGTGATGTGAATTAAA
ATGACTCACTAGGTAAAGCAATAAGTATTCTGGTTCCTGGTCTAAACCTT
TAATGACCTTTTTGCCTTGTTCATCAATAACTTGAAAATCAATTTTCTAC
AGATCGTTGAAGAATTGAAAGAGCTAGCAAACGAAAATACCACGGATAAC
AAAGTTTTCGAAAAGTCTTTGATTAGCCTTGGAGAAACCTTTGAAGGGAG
AGAGATATACGCATTTAAGGTAAGTCTCCATTTGGTAGTCACTTTATTAG
CATGAAGGTAGAGCGTTCAGCTATTGAGAGCAAGGCGGTAGGTTCATATA
CCACTCAAAATGTGAGATGAACAATGTAAGTGGAGAAATCTAGGAAAAGG
ATCACACTCGACTGTGGTTGAAAACTTACTAGATACAAATAAGAATGCAA
GTGCGATTAAGTAAGAAAATGGCCGAATGACACGCTATATATAATCGAAT
CTCTGGGATTCGGACAGCCCAATAAACAAAGAGAGTAAAGGCTTAATTAA
GAAACCTACTGTTAAAAATATTTTGGTTAGCTTAGAGAGCCCATCCCCCA
GCGGACTTTCAATTCATGCAATCACGCATTTTTTTTTTTTCAAGCATTCC
CGCAATTTTCTTTCGCAATTCACGCGATTTCTTTTCACACAAAGTTTTCT
GATTCACGCATTCATGCATTTTTTTAAAATTTTTACGCATTCCCGCAAGT
GAAAAAGCCAATTTAAGGCTTTGCACCAATCTCGTTGTTAGCACCCAAAC
GCTCCCCCCCCCCAAAAAAAAAGTCCACTTCTTGTTGATTTCAATTTCTT
TGATATCAATTTTTTTAGTTTATCAGAAAAAATGACAATGAAAATAAACG
CAAAACTATGGTCATTGAATGTGGAGCTCACGCAAGAGAATGGGTCAGTG
TATCGACATGTGTTTACATCATTACTCGGGTAAGTCTCGACAATCGTTCG
ACTGATTCAGATATATTAGAAATAAAGCCAAAAGGGGGCCAAAAGTAATG
GAGGGAACAAATTTCAGTCTTGTTTATACAAACTAAATCCCGTAACAATA
ATCGTATTATATCTACCGTGAAAAGCACAGCTCAAAATCATATATTTACG
CTGTGCCGACGAATCGAGATTCTATTCATCGCGCAATCAGCAAAGACAAA
AGTAACCATGACGACCATCCAAGATCTTGGATGAGCGTCATAGTCGATAT
TTTTATTCCCGTCGTTGAAAACACAGCTTACAAAAAGTCATCAATGCTTT
CTAAAAAGAGTCAGTGATAGAGAATCATAACATAAAGTCTGTCTATTATT
TCGATTCAATTAAAGTGACATTTCCATAATTAAAAGTTTAGTAATTACTG
TTATACATTTGGGGATCATGTAAAAGATTTCTTTCGAAATAAACTCATTT
CAACTACACTTGGAGGTTTCTGGGGAATTTGTAAATAGTAAACTGCATAC
TGATACAGTCTGCTAGACATTAATATGGTAATATTTGCTCTTCATCTTTG
ATTTTTTCTACAGTGATTAGATTGACACATGCGCGATAAAATTTCTATTA
TTTGTCTTCAGAGGTTACTATTTTTTTTGATAACTTAACCTCTGATACTC
AGGGTATATTATATCATATAACGCCTACACCACTGTATTTACACGCATTA
TAAACGACTCCAGTCTACTTGTTTGTGTACTCGTCATTCTTTGTTTGATT
ATACTTTTACCGTCCTCAATTTGAAAGGTCAAAACTGTGGGTTATTCCAA
ATCGCTTCAGCCAGTCCACCGTTCTCAAAAGTGCAAATACATAAACAACT
TACGTGTTACCTAAATGTTACCCCATGTTAGGCTGTTGCTAACCCTCTAG
TGAAAAGAGTTTCTTACACATGGTTTCTTATATAGTTTCGTGTATATAGA
AGTATATCTACAGAAGTCTGCAATTCACACTAACTTCATGTTTGAGAGAT
TATTCAAAGTGACGGTTGCTTACCTAATGTAATAGAACATGTAGTTATGG
ACCACATAGATTAGAGTCTACTTTTGGCTGAACTTTGCTTTTCGATATTT
TTTTATGACGCTGAGTCCAGTAAAGTAGACTAGGAGCACTTGGCGAGGTC
GCCATTTTGAGAGAAAATGTTAAAAATCCAAATAACAATAAAACTACTTG
GAGTTGAAAGATAATCAAAAATGAGAAACAACCATCAATAACAGATTTGC
AATCCTTATTCTCAAATAAAAACATTGCCTGTTTTTACCTTCCAAAAACA
ACTAAAATCTCCCGGCGGACTGTTTTACTGTCCGCCTAAGCAAAAACATA
TTACCATATACTACCGGGCCACTTAATCGCGCCATCCAGTCTATCAAAAA
GCTTCAAGTGAACCCCGGGCTATCCCAGCTGGCACACAACGTTGTTTCAA
CGTTCGTCTAACGTTATATGGACGTTGTGAACGTTAGATGGACGTTGAAA
AAACGTTGAAACAACGTTGTGTGCCAGCTGGGATGGACCACATTGCTTTT
TAAAATGAATATGCTCCGTATTTTAATAAATGATCTCTGAAATCTCTAGT
CCCTGGCAACAATCATTACTCAAATGATAGATGATTTTATGAATGAGATT
GCTCCACAAACTAGTTAAAAAAACGGTGACCACAAGTCGTTAGTAAACTT
ATCGAATATGGTCAATTCTTAACATTCACTAAGTTAACGCAAGTAAAAAT
TTGTTTTTTAACATTTATCTAGACGGGCAGACAGTCTGGAAAGGCTGACC
GCTCACATTTTATAAATCAATTGAAACGAGAGTACTATAAACACCGGAAC
CTAGTTTTATTTTTGTGTTTTTAAAACATAAAAGACTATCGATCCAATAC
TTCAGCCCAATAAAATTATAAAACTTTGGTCAAAATTTCAAAAATTTATG
TAAGACCCTTTGAGTGAGTCAATTTCGGAGTTTCACGGAATCCTTATGGA
CACTGACTTATTCTTCCATGGCTTTTTACTCCTCTGAGGGACCTTTGTGA
GTTAGAAAAAGGTAACCCTTATGGCTCTCACATACCCAATAGCCGTTTTA
CCCAAGCGCGTCCCCAGGGATACGTGTTGTAATAGAATATCGATAGTTTC
TAGTCCCTTGATAAGCAGGCTTTAATGTAAACAAGCTTATAATTTATTAC
GGGTTTAATACAAATACGATAATGAATTTTCTATTGCTGTCAAAGAGATT
GCTCCACAAACCAGTATTAACAAGAGGGACCACAAGTCGTTTGTAGGCTT
GTTGAGTATGGTTTATTTTCAACCACCTCAGCCATGCAAGTAAAATTTGT
TTTTTAACATTTATCTAGACGGGCGGAAAGTCTGAAAAGGCTGACTACCC
AAATGACATAATAATTGAATTATATCTACAGAAATCATATAGGCACATAT
CTCAACACAGCTGAGAAGTGCGACTGTAAGCTTCTGTGTATCAATTTCCA
CACTCGAAGGGGAAAACAGGGAAAGTCAAGATAACGAATGTGGCAGTACA
CTTATTTGTTTGTTCTCCTTACAGATTGCAAGATCCTCAAATACTGCGAA
TACAGTTTCGAAGTATGACTGGGTCCTTATTCCAGTTTTAAATCCTGATG
GATATGTTTACACGTGGAAGAATTCAACGACACGAATGTGGCGCAAGAAT
AGGTCATTCACTGAAGAACAAATGAAAATCTATCTTGAGCAGAAAGATGA
TGTTTGTATTGGTGTTGATATTAATCGAAACTTTGATTCGAATTGGGGAG
GTAATAGATTAATGTTGTGGTCAAACTCGAGCCCAGTCCCTTAATTCACT
ATTTTCATCCTAAGATGCACTTTCAAAAGTTTTACGTCTATCAGCAAATT
TATAAAGTTGTACATGTAGATTGGAATTGCAAAAAAAAGAAATTGTCATT
TATAAAAGGTATAAGGCGACTTTAAAATTTAAAAGGGGCAATTTAATTCA
CTTTTTTGAAAAGATATCGAATTGTACACTGTAATTATGTATTCATAATA
TAAAAAGATAATTGCTGGTTGATCACGTTGGTCCTTCCGATCACGTTATC
ATCTAGACTAGCAAACTAGTCTGTTAATGTCAGAGGGCGGGAAAATAAAG
GCGGCGGGCGTTTGCTAGAATTAGGAGCTGCGTAGGAGAACGAGAAAAAG
TTGGTGAGAGGCTGCTTTCAGTCCTTGCCGCCGACAAAATTTCTTCCTAC
GCTTACCTAACTCCTATGCTCACTTTTCCCACGTGATACCGTTCCAGCCC
GACTGGCGTGCCAGTCTAGTTATCATTTATCTGATATTCCGATGGCGTAT
TGGCGGCCGCTCACGCTAAAGCTCTAAAGGAGCGGGCCAATAATATTTTC
CCGACCTTCAGAGCTTTAGCGTGTCGGAAGAAAATTTCTACATCGAGTAC
CAGATAAAGTTATCATCCACTTTAAAATCTTAAATCAAGAGATCACGAAC
TTGAACAAACACCAATCACGCTCTTAGTTAGTTCACATTTAAATTGAGAT
ACATTTCAACCATAGGTCCTGGTGCTCCTAAAACTCCATGTTTCACAATG
TATGCAGGACCAAAGCCTTTCTCGGAAAATGAATCCAAAGCACTGGTAAA
CTTTTTAACGGATAATAAAGACGAAGTTATTGCTTACATCTCACTTCATA
CTTTTGGACAAAAATGGATGACACCTTTCGGACATTCGAAAGAGAAACCA
ACCAATCTAAATGAAATGGTATATGTTTTTGATAATAATAAAGAAAAAGT
GCTTCTTTCCTAGGCCGAGTAACAAACTTAGATATACAGTGACTTAACTC
AAACAAGTTTTATGACCCCTTCAAATGTCAATGTTTTGTTTTAGGAGCGT
GTTGCATTACTATCAGTGGAAGCCATCAAGAAAGTTAGTGGTCTGGTGTA
TACAGTAGGATCTTCTCATGATATTATGTGTAAGTAGGATGAATCATCAC
TCCAGAAATTAATTAAAAGCGATATTTTTTCATAAGTAAGTCAGTCAATA
TGCTGACAAATTCATTTAACTTTACACCCCCGTATCAAAACTAAACTCGT
CCATCTACTAGACATTCGAACCAAAATCAGCCATTAAAATTCCCGATGAG
AGGGCATTATACCGTCGAGTTATATCCCTATTGGAAACCCTCATTATAAC
CATAGATTTAATTTTGACTTATTTTTTCAGATCCGAATTCTGGTAGCAGT
GTAGACTGGGCCTCTAAAACCTTAAGCATACCCTACACTTACCTCGTTGA
AATGGTACCTAAAAATGCAACGTTGGAAGTTGGTTTCATGGCTGAACCTG
AGTTAATGATGGAAAATTGCAAAACGATATGGATCGGTTTACAAGCTATG
GCTTCGCATTTGAAGAATGATTCATGA Coding sequence (CDS) from alignment at sc0000344_pilon:238337..244913- >XLOC_014433 ID=XLOC_014433|Name=XLOC_014433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2124bp|location=Sequence derived from alignment at sc0000344_pilon:238337..244913- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTAATGTTTCTTGTATTACTGATTTTTGGGCAGAATGGATTAATCAG
CACAGTTTACACAAATTACAAAGAAGATTTGGGGAATGGTTTCGATTTGG
AGCACTTTCAAACATTTGATAAAATGCTAATGTTTCTTGTATTACTGATT
TTTGGGCAGAATGGATTAATCAGCACAGTTTACACAAATTACAAAGAAGA
TTTGGGGAATGGTTTCGATTTGGAGCACTTTCAAACATTTGATAAAATCG
TTGAAGAATTGAAAGAGCTAGCAAACGAAAATACCACGGATAACAAAGTT
TTCGAAAAGTCTTTGATTAGCCTTGGAGAAACCTTTGAAGGGAGAGAGAT
ATACGCATTTAAGATCGTTGAAGAATTGAAAGAGCTAGCAAACGAAAATA
CCACGGATAACAAAGTTTTCGAAAAGTCTTTGATTAGCCTTGGAGAAACC
TTTGAAGGGAGAGAGATATACGCATTTAAGTTTATCAGAAAAAATGACAA
TGAAAATAAACGCAAAACTATGGTCATTGAATGTGGAGCTCACGCAAGAG
AATGGGTCAGTGTATCGACATGTGTTTACATCATTACTCGGTTTATCAGA
AAAAATGACAATGAAAATAAACGCAAAACTATGGTCATTGAATGTGGAGC
TCACGCAAGAGAATGGGTCAGTGTATCGACATGTGTTTACATCATTACTC
GGATTGCAAGATCCTCAAATACTGCGAATACAGTTTCGAAGTATGACTGG
GTCCTTATTCCAGTTTTAAATCCTGATGGATATGTTTACACGTGGAAGAA
TTCAACGACACGAATGTGGCGCAAGAATAGGTCATTCACTGAAGAACAAA
TGAAAATCTATCTTGAGCAGAAAGATGATGTTTGTATTGGTGTTGATATT
AATCGAAACTTTGATTCGAATTGGGGAGATTGCAAGATCCTCAAATACTG
CGAATACAGTTTCGAAGTATGACTGGGTCCTTATTCCAGTTTTAAATCCT
GATGGATATGTTTACACGTGGAAGAATTCAACGACACGAATGTGGCGCAA
GAATAGGTCATTCACTGAAGAACAAATGAAAATCTATCTTGAGCAGAAAG
ATGATGTTTGTATTGGTGTTGATATTAATCGAAACTTTGATTCGAATTGG
GGAGGTCCTGGTGCTCCTAAAACTCCATGTTTCACAATGTATGCAGGACC
AAAGCCTTTCTCGGAAAATGAATCCAAAGCACTGGTAAACTTTTTAACGG
ATAATAAAGACGAAGTTATTGCTTACATCTCACTTCATACTTTTGGACAA
AAATGGATGACACCTTTCGGACATTCGAAAGAGAAACCAACCAATCTAAA
TGAAATGGTCCTGGTGCTCCTAAAACTCCATGTTTCACAATGTATGCAGG
ACCAAAGCCTTTCTCGGAAAATGAATCCAAAGCACTGGTAAACTTTTTAA
CGGATAATAAAGACGAAGTTATTGCTTACATCTCACTTCATACTTTTGGA
CAAAAATGGATGACACCTTTCGGACATTCGAAAGAGAAACCAACCAATCT
AAATGAAATGGAGCGTGTTGCATTACTATCAGTGGAAGCCATCAAGAAAG
TTAGTGGTCTGGTGTATACAGTAGGATCTTCTCATGATATTATGTGAGCG
TGTTGCATTACTATCAGTGGAAGCCATCAAGAAAGTTAGTGGTCTGGTGT
ATACAGTAGGATCTTCTCATGATATTATGTATCCGAATTCTGGTAGCAGT
GTAGACTGGGCCTCTAAAACCTTAAGCATACCCTACACTTACCTCGTTGA
AATGGTACCTAAAAATGCAACGTTGGAAGTTGGTTTCATGGCTGAACCTG
AGTTAATGATGGAAAATTGCAAAACGATATGGATCGGTTTACAAGCTATG
GCTTCGCATTTGAAGAATGATTCATGAATCCGAATTCTGGTAGCAGTGTA
GACTGGGCCTCTAAAACCTTAAGCATACCCTACACTTACCTCGTTGAAAT
GGTACCTAAAAATGCAACGTTGGAAGTTGGTTTCATGGCTGAACCTGAGT
TAATGATGGAAAATTGCAAAACGATATGGATCGGTTTACAAGCTATGGCT
TCGCATTTGAAGAATGATTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000344_pilon | genome | sc0000344_pilon:238337..244913 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-1062:196 |
| Aaloc | 781-864:534 |
| Aaloc | 580-780:861 |
| Aaloc | 352-576:1854 |
| Aaloc | 241-351:4560 |
| Aaloc | 124-240:5276 |
| Aaloc | 1-123:6578 |
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