XLOC_014330 (mRNA) -

Overview


Name	XLOC_014330
Unique Name	XLOC_014330
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000228_pilon:275823..278453-
coding sequence from alignment at sc0000228_pilon:275823..278453-

mRNA from alignment at sc0000228_pilon:275823..278453-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_014330 ID=XLOC_014330|Name=XLOC_014330|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2631bp|location=Sequence derived from alignment at sc0000228_pilon:275823..278453- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCATGTTAATGAAGAACCACAAGTTCCACTGTATAGTAACATCAA
GTTTGTGGATGGTTACCAAGTTACCATGGACGCACTTGGAAAGTCCTATC
TGATGAGCGACACACCTCTCAGTAGCGGCAATCATGGGAAGTTATTCCAT
CTCTTTGGCGAAGAGAAGCAGACTCAAAATTTGCGAGAAACTACACTAAT
TAGACTTGCTGGTGGAGTTTTCAAATCCACAAAACCTGTCTTATCTACAG
AGCAATGCGAAGAGATGGTTGCTCGATTGGAGAATGTGAATAAGGAGTTT
TCTCTAACAAACGAAGAAAAAAGCCCAACCATAACATCCGTTATTTACGA
TAAACAATTTGCAGATACTGTATGGGAGAGTTTGAGGACAGATTTTGTTC
GCCAAAACCAGAAGCCTGCCATGTTAGGTTTTGATGTTCAACGAGGGAGC
TGGGAACTAGAAGGATTACATCATGGTTTGACTTTTCATAGACATTCCAA
TCGTTACTCAAAACCTAACCAACTCGACGCACAATTCTGTCCTACTCATG
ACCGTCGTTCACTTTACACTTGTTTGATTTTCCTTTCTGATGAACTGAAT
GGCGGTGAAGTAGAATTCACAATCTTGCTGCAATCTGAAGATGATGCAAT
CAATCGAAAGAATGAAACCATCAAAACATTGATCAAGAAATACGAGAACA
CTGGTCTTCTCAGAACAATCAGCTACAAACCTAAATCAGGGGATGTCATC
TTCTTTAAACAAGATATCATATATAAGCACAAAGACCTCGCAAAAGACAC
TGACCACTCAAAATATTTCCTTAAATGTGATTTGATGTTCGAACGGCGTG
AAGCAGAGCAGTTTCAGTATTTCATCCCAGAAGAGGAGTCGAGGGCGTAC
GAAGCTTGCGCCCGAAACGCCCATGTCATCATGCGTGAGGAGTTCAATGA
TCATTATCGTTCTCTGAGAGACGAGGGGAAATATTACATAAATGATGATG
ACTATGATTATCCCGATGAAGAACGCATGCGCGAATTATTAGAACATATT
TTGAATGAGACGTATTGTTATCCTAAGAAATCGAAAAGTCAAGATGATAT
CGATAGCCAGGGTGTTGGGAGTTTGAGTGAGGACAAAAATAGAAAAGTTT
CTTCAGTTGATTCTGAAATACTTGATGATAGTCTGTCGCGCGCATGCGTC
AATTCATCTACTTTCCCATGCGAAGTATGGATGGAAATTATCAAAAAGTT
GAAAGTGAAGGATTGTCGGAACCTCATCAAGGTTTTCCCTGACTTAGAGG
ACACGTATCATCGAATGTTAAAAACATCGGTCATTGTGCCCGAGTTGATT
CACCATAATGGAGTCACAACTGAATTTATTTTTAAGCGTTGCAACCTGAT
CGAAGATAATCCTGAAAAGATGGCTCTAGTCAGTACCGTTTACAGTATTA
TGCTTCTGGGCAACAGTAACCGCGAGAAGGACTACTTGATTATGTTTGAC
CGGGATCAAAAGCAGGCTGAAGAGATCACCTTGGAGGAGATTTTACATTG
CCTTTTTACTGATGGCGAGCTGCCGGATGGTGATTTGTTTGTCGTTACAC
AACAGGATGTGGACGTGAAACAACCGATACGCGATTTGTTTTACAGTGTC
GATCGAAGGTTCATGACGCAGTATTATAGGATGAACTTCTTTGGAGTCGA
CGTCAACGCAGAGAAGAAATGCTCATTTGAAATCACAAAGGAATATGATA
ATGCACGGAAGACGCACATCATGTTCGATCAATATAGACATAATGAGCGG
ATCGAAAGTACTCTAGAAAAGCTGACAGGTTGGGATCGTACTTTCCGCTT
ATATCGGGACAACAAAAATCGGGAAGAAGAAAGTTTAGAGAAATTCCAAT
ACCAATTCGAACCTGGTTTGACGTCCCAAGAAACTTTAAATGGTATTAGC
AGATTCTTACCTTACCCTGACAGCAGTGAAAAGGACGAAGAAAACACTTA
TCTTTTTGAGCTCGTCGAGCGGGAGAGAAATTGGCGTCTTGCGGACTACC
CGAGTGCTTTGATAGTCCGTAAGCTGGACAAACCGGCGTCCGTGAATCGG
GAAGATTATGTTGATGAACAGATATCGTGGAAGTTGAGCAATAATTGTAC
AACACACGTGTTTAATCGGTTCATTTTGAATAATGACAAATTAGATCATT
TTAAAATCGACGAAGACTATGAATACGTCGAAAATTCCGATGATGATGAT
GAGGACGGTGAGGAATACAAGTGGGAAAAATATGACGGAAGCAGCCTCTG
TATTATCATGAGGGATAATTGTCTTAACCGAAAGTTAATGATGGAACGGG
TCGAAATGCGATACAAAGAATTAAAGGGCAAGTTTTATGTCGATAGCTTC
ATTGTGAAATTAAGGGGCTGCGGTAGTGAAAAGTGTAAAGGCAGTATCGA
TCTCCAACGACATCCGCTGAGCCTTGACCCAAAATGGATTTCACGCCCGT
ATGACTTCACCGTCAATGAGTATACGGACATTGTGGCATTCCCGTTAATC
GGACACATGCATTTGACGTATGTGAAAGAAGAAAATATTATTCGCTTTTT
CACGACGTACGGCAATTTAATTGCTTTTTAA

Coding sequence (CDS) from alignment at sc0000228_pilon:275823..278453-

>XLOC_014330 ID=XLOC_014330|Name=XLOC_014330|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5262bp|location=Sequence derived from alignment at sc0000228_pilon:275823..278453- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCATGTTAATGAAGAACCACAAGTTCCACTGTATAGTAACATCAA
GTTTGTGGATGGTTACCAAGTTACCATGGACGCACTTGGAAAGTCCTATC
TGATGAGCGACACACCTCTCAGTAGCGGCAATCATGGGAAGTTATTCCAT
CTCTTTGGCGAAGAGAAGCAGACTCAAAATTTGCGAGAAACTACACTAAT
TAGACTTGCTGGTGGAGTTTTCAAATCCACAAAACCTGTCTTATCTACAG
AGCAATGCGAAGAGATGGTTGCTCGATTGGAGAATGTGAATAAGGAGTTT
TCTCTAACAAACGAAGAAAAAAGCCCAACCATAACATCCGTTATTTACGA
TAAACAATTTGCAGATACTGTATGGGAGAGTTTGAGGACAGATTTTGTTC
GCCAAAACCAGAAGCCTGCCATGTTAGGTTTTGATGTTCAACGAGGGAGC
TGGGAACTAGAAGGATTACATCATGGTTTGACTTTTCATAGACATTCCAA
TCGTTACTCAAAACCTAACCAACTCGACGCACAATTCTGTCCTACTCATG
ACCGTCGTTCACTTTACACTTGTTTGATTTTCCTTTCTGATGAACTGAAT
GGCGGTGAAGTAGAATTCACAATCTTGCTGCAATCTGAAGATGATGCAAT
CAATCGAAAGAATGAAACCATCAAAACATTGATCAAGAAATACGAGAACA
CTGGTCTTCTCAGAACAATCAGCTACAAACCTAAATCAGGGGATGTCATC
TTCTTTAAACAAGATATCATATATAAGCACAAAGACCTCGCAAAAGACAC
TGACCACTCAAAATATTTCCTTAAATGTGATTTGATGTTCGAACGGCGTG
AAGCAGAGCAGTTTCAGTATTTCATCCCAGAAGAGGAGTCGAGGGCGTAC
GAAGCTTGCGCCCGAAACGCCCATGTCATCATGCGTGAGGAGTTCAATGA
TCATTATCGTTCTCTGAGAGACGAGGGGAAATATTACATAAATGATGATG
ACTATGATTATCCCGATGAAGAACGCATGCGCGAATTATTAGAACATATT
TTGAATGAGACGTATTGTTATCCTAAGAAATCGAAAAGTCAAGATGATAT
CGATAGCCAGGGTGTTGGGAGTTTGAGTGAGGACAAAAATAGAAAAGTTT
CTTCAGTTGATTCTGAAATACTTGATGATAGTCTGTCGCGCGCATGCGTC
AATTCATCTACTTTCCCATGCGAAGTATGGATGGAAATTATCAAAAAGTT
GAAAGTGAAGGATTGTCGGAACCTCATCAAGGTTTTCCCTGACTTAGAGG
ACACGTATCATCGAATGTTAAAAACATCGGTCATTGTGCCCGAGTTGATT
CACCATAATGGAGTCACAACTGAATTTATTTTTAAGCGTTGCAACCTGAT
CGAAGATAATCCTGAAAAGATGGCTCTAGTCAGTACCGTTTACAGTATTA
TGCTTCTGGGCAACAGTAACCGCGAGAAGGACTACTTGATTATGTTTGAC
CGGGATCAAAAGCAGGCTGAAGAGATCACCTTGGAGGAGATTTTACATTG
CCTTTTTACTGATGGCGAGCTGCCGGATGGTGATTTGTTTGTCGTTACAC
AACAGGATGTGGACGTGAAACAACCGATACGCGATTTGTTTTACAGTGTC
GATCGAAGGTTCATGACGCAGTATTATAGGATGAACTTCTTTGGAGTCGA
CGTCAACGCAGAGAAGAAATGCTCATTTGAAATCACAAAGGAATATGATA
ATGCACGGAAGACGCACATCATGTTCGATCAATATAGACATAATGAGCGG
ATCGAAAGTACTCTAGAAAAGCTGACAGGTTGGGATCGTACTTTCCGCTT
ATATCGGGACAACAAAAATCGGGAAGAAGAAAGTTTAGAGAAATTCCAAT
ACCAATTCGAACCTGGTTTGACGTCCCAAGAAACTTTAAATGGTATTAGC
AGATTCTTACCTTACCCTGACAGCAGTGAAAAGGACGAAGAAAACACTTA
TCTTTTTGAGCTCGTCGAGCGGGAGAGAAATTGGCGTCTTGCGGACTACC
CGAGTGCTTTGATAGTCCGTAAGCTGGACAAACCGGCGTCCGTGAATCGG
GAAGATTATGTTGATGAACAGATATCGTGGAAGTTGAGCAATAATTGTAC
AACACACGTGTTTAATCGGTTCATTTTGAATAATGACAAATTAGATCATT
TTAAAATCGACGAAGACTATGAATACGTCGAAAATTCCGATGATGATGAT
GAGGACGGTGAGGAATACAAGTGGGAAAAATATGACGGAAGCAGCCTCTG
TATTATCATGAGGGATAATTGTCTTAACCGAAAGTTAATGATGGAACGGG
TCGAAATGCGATACAAAGAATTAAAGGGCAAGTTTTATGTCGATAGCTTC
ATTGTGAAATTAAGGGGCTGCGGTAGTGAAAAGTGTAAAGGCAGTATCGA
TCTCCAACGACATCCGCTGAGCCTTGACCCAAAATGGATTTCACGCCCGT
ATGACTTCACCGTCAATGAGTATACGGACATTGTGGCATTCCCGTTAATC
GGACACATGCATTTGACGTATGTGAAAGAAGAAAATATTATTCGCTTTTT
CACGACGTACGGCAATTTAATTGCTTTTTAAATGATTCATGTTAATGAAG
AACCACAAGTTCCACTGTATAGTAACATCAAGTTTGTGGATGGTTACCAA
GTTACCATGGACGCACTTGGAAAGTCCTATCTGATGAGCGACACACCTCT
CAGTAGCGGCAATCATGGGAAGTTATTCCATCTCTTTGGCGAAGAGAAGC
AGACTCAAAATTTGCGAGAAACTACACTAATTAGACTTGCTGGTGGAGTT
TTCAAATCCACAAAACCTGTCTTATCTACAGAGCAATGCGAAGAGATGGT
TGCTCGATTGGAGAATGTGAATAAGGAGTTTTCTCTAACAAACGAAGAAA
AAAGCCCAACCATAACATCCGTTATTTACGATAAACAATTTGCAGATACT
GTATGGGAGAGTTTGAGGACAGATTTTGTTCGCCAAAACCAGAAGCCTGC
CATGTTAGGTTTTGATGTTCAACGAGGGAGCTGGGAACTAGAAGGATTAC
ATCATGGTTTGACTTTTCATAGACATTCCAATCGTTACTCAAAACCTAAC
CAACTCGACGCACAATTCTGTCCTACTCATGACCGTCGTTCACTTTACAC
TTGTTTGATTTTCCTTTCTGATGAACTGAATGGCGGTGAAGTAGAATTCA
CAATCTTGCTGCAATCTGAAGATGATGCAATCAATCGAAAGAATGAAACC
ATCAAAACATTGATCAAGAAATACGAGAACACTGGTCTTCTCAGAACAAT
CAGCTACAAACCTAAATCAGGGGATGTCATCTTCTTTAAACAAGATATCA
TATATAAGCACAAAGACCTCGCAAAAGACACTGACCACTCAAAATATTTC
CTTAAATGTGATTTGATGTTCGAACGGCGTGAAGCAGAGCAGTTTCAGTA
TTTCATCCCAGAAGAGGAGTCGAGGGCGTACGAAGCTTGCGCCCGAAACG
CCCATGTCATCATGCGTGAGGAGTTCAATGATCATTATCGTTCTCTGAGA
GACGAGGGGAAATATTACATAAATGATGATGACTATGATTATCCCGATGA
AGAACGCATGCGCGAATTATTAGAACATATTTTGAATGAGACGTATTGTT
ATCCTAAGAAATCGAAAAGTCAAGATGATATCGATAGCCAGGGTGTTGGG
AGTTTGAGTGAGGACAAAAATAGAAAAGTTTCTTCAGTTGATTCTGAAAT
ACTTGATGATAGTCTGTCGCGCGCATGCGTCAATTCATCTACTTTCCCAT
GCGAAGTATGGATGGAAATTATCAAAAAGTTGAAAGTGAAGGATTGTCGG
AACCTCATCAAGGTTTTCCCTGACTTAGAGGACACGTATCATCGAATGTT
AAAAACATCGGTCATTGTGCCCGAGTTGATTCACCATAATGGAGTCACAA
CTGAATTTATTTTTAAGCGTTGCAACCTGATCGAAGATAATCCTGAAAAG
ATGGCTCTAGTCAGTACCGTTTACAGTATTATGCTTCTGGGCAACAGTAA
CCGCGAGAAGGACTACTTGATTATGTTTGACCGGGATCAAAAGCAGGCTG
AAGAGATCACCTTGGAGGAGATTTTACATTGCCTTTTTACTGATGGCGAG
CTGCCGGATGGTGATTTGTTTGTCGTTACACAACAGGATGTGGACGTGAA
ACAACCGATACGCGATTTGTTTTACAGTGTCGATCGAAGGTTCATGACGC
AGTATTATAGGATGAACTTCTTTGGAGTCGACGTCAACGCAGAGAAGAAA
TGCTCATTTGAAATCACAAAGGAATATGATAATGCACGGAAGACGCACAT
CATGTTCGATCAATATAGACATAATGAGCGGATCGAAAGTACTCTAGAAA
AGCTGACAGGTTGGGATCGTACTTTCCGCTTATATCGGGACAACAAAAAT
CGGGAAGAAGAAAGTTTAGAGAAATTCCAATACCAATTCGAACCTGGTTT
GACGTCCCAAGAAACTTTAAATGGTATTAGCAGATTCTTACCTTACCCTG
ACAGCAGTGAAAAGGACGAAGAAAACACTTATCTTTTTGAGCTCGTCGAG
CGGGAGAGAAATTGGCGTCTTGCGGACTACCCGAGTGCTTTGATAGTCCG
TAAGCTGGACAAACCGGCGTCCGTGAATCGGGAAGATTATGTTGATGAAC
AGATATCGTGGAAGTTGAGCAATAATTGTACAACACACGTGTTTAATCGG
TTCATTTTGAATAATGACAAATTAGATCATTTTAAAATCGACGAAGACTA
TGAATACGTCGAAAATTCCGATGATGATGATGAGGACGGTGAGGAATACA
AGTGGGAAAAATATGACGGAAGCAGCCTCTGTATTATCATGAGGGATAAT
TGTCTTAACCGAAAGTTAATGATGGAACGGGTCGAAATGCGATACAAAGA
ATTAAAGGGCAAGTTTTATGTCGATAGCTTCATTGTGAAATTAAGGGGCT
GCGGTAGTGAAAAGTGTAAAGGCAGTATCGATCTCCAACGACATCCGCTG
AGCCTTGACCCAAAATGGATTTCACGCCCGTATGACTTCACCGTCAATGA
GTATACGGACATTGTGGCATTCCCGTTAATCGGACACATGCATTTGACGT
ATGTGAAAGAAGAAAATATTATTCGCTTTTTCACGACGTACGGCAATTTA
ATTGCTTTTTAA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_014330	XLOC_014330-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000228_pilon	genome	sc0000228_pilon:275823..278453 -

Properties


Property Name	Value
Aaloc	1-2631:2632

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XLOC_014330 (mRNA) -