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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:324658..327845+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014320 ID=XLOC_014320|Name=XLOC_014320|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3188bp|location=Sequence derived from alignment at sc0000228_pilon:324658..327845+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATCGGCTGGAAAAAACTAGAATTTGTTCTCCTGTGTTTTCCTTT
ACTAGTAAGTTACTCCTTTTGTGTGCACATATCATCAGGTAAAGGAAGAC
TTTCTGAAAGGAATTTGGAAAAAGTAGACGGTGCAAGATCTGCAGTAGAA
TGTGTGTTGAGATGtcaacagaaaaagaaaaacgctTTTTACGGAGACGA
TTGCTCGTGCGGATGCTTTGAAGGAGATGGTGGTAATTTGCAgaacgatg
acgtcataaatggaTACAAATATCTCAAGGTAGCCCTTgtctttacaatt
aaaaaagtcGTTTTTTCAAACTTCGTCGAGAAGACCACTTCAATTTATTT
AGTTAGAAAGCTGAGGAAATGAACTCTCCAATAGTGCCAAAAGTTTTATA
CGTAGGTCATTTTTTAACCTacaattaaagtttgaaatgtggtaaaaaag
ttggaaaaataATGTCTTTAATATAAGGTTAATGTAAGATCATGAATAAG
CACAAGAAGCAGAGTGAGTTCACTTCTTGAAATTCATTACGTAATCATTT
ATACGCAAACACCCAAAATATATAAGACACCAGTTTTAGAATTTTGAGCA
ATATTACGTGGAAAACTGTGAAGATTTCCTTTCAAGAAAGACGTTGATAC
AAATTCATTTCTAGTCAACATTCAATTGACTCGTGGTGGGAACCCAATAA
ATTTTTCCGTTGTTGTTGTCTTTTTGTAAAACATAACAAAAGAGTGGTAA
GTCATAATTTTGATTCTAAGGTGACATACAGGGTTGTTGGAAATACACAC
AAAAGCACTCTATGCTGTGGTTTCGACATCTTTGACAAATCGTACCTTTA
TGGCGCTTTATGTATGCAACTTAGGAAtataaaaagttaattttttctta
ttttttagtctCAGAACATTGTGGTTTCACAACAAGGTGGATCTTTTTCT
TTAGAAGGTAACTCTTTTTCGTCAACCccattcattaaatttttttataa
ggacaaactATATAGAAACATTAGGCttcccgatttcttaggaaaatggg
caaaattactcataaaatggtgaaaataagaacgtgctaagaacatttaa
aacaaaaaaagttaagaacatccgaatgcttcaaaaaatttggttgttct
cataaaaacgtgtaatagGCTTTAACCCTTTCAAGACTGATGACAGATAT
TTATCCGAAATGGAGTGTTGAGGCGAAGCTTAAAACGCATAGCATGAATT
ACAGGCCAGGAAAATACCCATCTTCCTTCATTTTTCGACCACAAAGACGC
CCAAAACATTTAATCTACAAAAGTTGCAGTGAATTTTTTGCTTAGTTTGA
AGAGCTGTGGTATgtaatactttaaaaaaattacttaatCTTTTTCGAAA
TCGCCTCATATGAGCAATAAAAATCCACAGTTTTCCAGGTCAATCTCCTC
GTCAATAAAAGAGGGAATTCGGTATGAGGACCGGGCTgcatcactgacct
ttatatatccctggaccaagctatatccgccatctttgataggatttttt
ggaattgatacccgagaagaagccattgcaatgttaaagattaacgtcta
acgacgctacatcatcaaaagttttccaggaaaagtagatctagcgctct
cgatgcattttcgagtagtgccgccattagggtaccacttttcaaaaaac
tccgataaaagattttgctatgccaggattgagaagcttggtccagggta
tataaaggtcaatgGGCTACATTCACCAAAGACTGCTAGCgtattatttt
tcttcatttgtgGTAGAGTTCAACCTTACAAAACATGCTGAAGGAAAAAT
CGTCAATATTATCCCAGAGACGGTGAACAACTTCATAATGACTTTCAATG
TCATGTTCCAAGTATCAGATCATGATATAACACAGCTATTAGCATTTGAT
GGAGCACGTCCACAAATCACAATGGACCATAATTGGATGAGATTCAAAAA
TAACCAggattcaaaaaaatttcaactgcGACCGAACAAAAATTATCATA
TTAAAGTTCGTAAATATCAATATGCAGGAGCACATGCCTGTAGAATCTGC
TTTCTTATTGATAATGTGGTCCATTGGATTGTAGGGGATGGAATTGGAAC
AGAAACGGACACCAAAGTCCTTCTTGGAGATCCTTTCTACAGGCTGCCCT
CTGCATCAGCTGTTGTTAGCAATTTACATTATCAACCGAAACAAGATTAT
TACGGTGTCGGTAAGTCAATAAATTattttcctattagcagattcatgta
acAAAGTAACGAATAAACctcgagtaaagctctgattggccgAGACTTGC
AAAGATCACCTCATACTTTGAAAGAAATATTCTAATGTAAGCAATTTTTA
GCAAATCAGagttttacacgttttttcgtgacttttttacatgaatctgt
tAATAGGAAATTTGTGTATTACCTTGGTTATATTTTCTTGATATTCAGAA
TATGCACCGCTTTTTTACAACAGCTGATTGCTAAGAGAAAGAAACTAGGC
AAATTACATACTTTCTTGAAGTCATTGCAAGGGTTTTTATCATATGATCC
AtgtatagcaaaaaaaaatccaaatcatAGACACTATTCGGCAGGATATG
GCTAAGACCAACTTTCATTCTTATCTAAAAGCGTGAGGTAAGCCATATTA
ATTTCAGTCCtcatttttactattttataggCGCAGAGGTTTATTTACCA
AAGCAGAGTGCCGTAGTCGAATATATTGCAAACTGGCCTCCCCCAAACTG
GCACGTGTCTTTCCGTCTCACTCTTTTAGAAGATTTCCCGAGTTGGTCAG
GTGTTTTATTATTCTCGACGCGTGTAGGGAACGGAGCAGTGGGCAATCGA
ATCCCAAGTTGTCAGATTGGACCAGGAAACATGGTGGTTATCAAGACACA
TATTGGAAATGACGGGGATAAAATCCTTTTCGAAAAACATCTACCGAAAC
AAACTCAAATACACATCACAATCGAACAAAAAATCATTGGAGGGCAGGCA
TATGTTAAAGGATATATCAACTCTGTTGAACAAGCAAACATGTTGCATTC
TAGGTATTCATCAATGCCTGTTCCTGTTGAAGTCTCGTTTCTTGAATCAA
ATAAACTGCTTGTAGTTAAGGATTTGGAAtataaatga Coding sequence (CDS) from alignment at sc0000228_pilon:324658..327845+ >XLOC_014320 ID=XLOC_014320|Name=XLOC_014320|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000228_pilon:324658..327845+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGATCGGCTGGAAAAAACTAGAATTTGTTCTCCTGTGTTTTCCTTT
ACTAGTAAGTTACTCCTTTTGTGTGCACATATCATCAGGTAAAGGAAGAC
TTTCTGAAAGGAATTTGGAAAAAGTAGACGGTGCAAGATCTGCAGTAGAA
TGTGTGTTGAGATGtcaacagaaaaagaaaaacgctTTTTACGGAGACGA
TTGCTCGTGCGGATGCTTTGAAGGAGATGGTGGTAATTTGCAgaacgatg
acgtcataaatggaTACAAATATCTCAAGATGTTGATCGGCTGGAAAAAA
CTAGAATTTGTTCTCCTGTGTTTTCCTTTACTAGTAAGTTACTCCTTTTG
TGTGCACATATCATCAGGTAAAGGAAGACTTTCTGAAAGGAATTTGGAAA
AAGTAGACGGTGCAAGATCTGCAGTAGAATGTGTGTTGAGATGtcaacag
aaaaagaaaaacgctTTTTACGGAGACGATTGCTCGTGCGGATGCTTTGA
AGGAGATGGTGGTAATTTGCAgaacgatgacgtcataaatggaTACAAAT
ATCTCAAGtctCAGAACATTGTGGTTTCACAACAAGGTGGATCTTTTTCT
TTAGAAGtctCAGAACATTGTGGTTTCACAACAAGGTGGATCTTTTTCTT
TAGAAGAGTTCAACCTTACAAAACATGCTGAAGGAAAAATCGTCAATATT
ATCCCAGAGACGGTGAACAACTTCATAATGACTTTCAATGTCATGTTCCA
AGTATCAGATCATGATATAACACAGCTATTAGCATTTGATGGAGCACGTC
CACAAATCACAATGGACCATAATTGGATGAGATTCAAAAATAACCAggat
tcaaaaaaatttcaactgcGACCGAACAAAAATTATCATATTAAAGTTCG
TAAATATCAATATGCAGGAGCACATGCCTGTAGAATCTGCTTTCTTATTG
ATAATGTGGTCCATTGGATTGTAGGGGATGGAATTGGAACAGAAACGGAC
ACCAAAGTCCTTCTTGGAGATCCTTTCTACAGGCTGCCCTCTGCATCAGC
TGTTGTTAGCAATTTACATTATCAACCGAAACAAGATTATTACGGTGTCG
AGTTCAACCTTACAAAACATGCTGAAGGAAAAATCGTCAATATTATCCCA
GAGACGGTGAACAACTTCATAATGACTTTCAATGTCATGTTCCAAGTATC
AGATCATGATATAACACAGCTATTAGCATTTGATGGAGCACGTCCACAAA
TCACAATGGACCATAATTGGATGAGATTCAAAAATAACCAggattcaaaa
aaatttcaactgcGACCGAACAAAAATTATCATATTAAAGTTCGTAAATA
TCAATATGCAGGAGCACATGCCTGTAGAATCTGCTTTCTTATTGATAATG
TGGTCCATTGGATTGTAGGGGATGGAATTGGAACAGAAACGGACACCAAA
GTCCTTCTTGGAGATCCTTTCTACAGGCTGCCCTCTGCATCAGCTGTTGT
TAGCAATTTACATTATCAACCGAAACAAGATTATTACGGTGTCGgCGCAG
AGGTTTATTTACCAAAGCAGAGTGCCGTAGTCGAATATATTGCAAACTGG
CCTCCCCCAAACTGGCACGTGTCTTTCCGTCTCACTCTTTTAGAAGATTT
CCCGAGTTGGTCAGGTGTTTTATTATTCTCGACGCGTGTAGGGAACGGAG
CAGTGGGCAATCGAATCCCAAGTTGTCAGATTGGACCAGGAAACATGGTG
GTTATCAAGACACATATTGGAAATGACGGGGATAAAATCCTTTTCGAAAA
ACATCTACCGAAACAAACTCAAATACACATCACAATCGAACAAAAAATCA
TTGGAGGGCAGGCATATGTTAAAGGATATATCAACTCTGTTGAACAAGCA
AACATGTTGCATTCTAGGTATTCATCAATGCCTGTTCCTGTTGAAGTCTC
GTTTCTTGAATCAAATAAACTGCTTGTAGTTAAGGATTTGGAAtataaat
gagCGCAGAGGTTTATTTACCAAAGCAGAGTGCCGTAGTCGAATATATTG
CAAACTGGCCTCCCCCAAACTGGCACGTGTCTTTCCGTCTCACTCTTTTA
GAAGATTTCCCGAGTTGGTCAGGTGTTTTATTATTCTCGACGCGTGTAGG
GAACGGAGCAGTGGGCAATCGAATCCCAAGTTGTCAGATTGGACCAGGAA
ACATGGTGGTTATCAAGACACATATTGGAAATGACGGGGATAAAATCCTT
TTCGAAAAACATCTACCGAAACAAACTCAAATACACATCACAATCGAACA
AAAAATCATTGGAGGGCAGGCATATGTTAAAGGATATATCAACTCTGTTG
AACAAGCAAACATGTTGCATTCTAGGTATTCATCAATGCCTGTTCCTGTT
GAAGTCTCGTTTCTTGAATCAAATAAACTGCTTGTAGTTAAGGATTTGGA
Atataaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:324658..327845 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 775-1230:2733 |
| Aaloc | 331-771:1819 |
| Aaloc | 280-327:909 |
| Aaloc | 1-279:1 |
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