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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:309016..312263- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014318 ID=XLOC_014318|Name=XLOC_014318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3248bp|location=Sequence derived from alignment at sc0000228_pilon:309016..312263- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCAAGATTATGGCCAGTGGATTTGGTTTTTCTTGTATTTTTCAT
TCAAATATTTGGTGATGGATTATTGACTTATCAAGATGAAAATCTTATTG
GAAACGACGTTATCAAACCAAGAATTTGCTCTGGGTTCAGTGACAATGAA
CATAAATCAAAATACATTTCCGAAATCGTAGCTAGTCTTGATCGCATCAT
AAATCACTTCTCTTTTTACACTGATCACCTGATCGCTGATGGTCTGTTTG
GTTTAAGAATCGCTGAAGGCGTGTTGAAAAATATCGTCCAATATGGAGAC
CGTTACAAACATCACAAAATTGAAGCATTACACTCTCGTTTATCAATGAT
CAATCAACTTTCATATGAAGGAATCACAAAGAGAAAATTACCTTATGATG
TTCAATTCGATAAAATCATGAGGGAACCTTTTGATCGATTGTGGCCATTC
AAAAGCTTCAAAGATTTCAAGAAAGACATTGTGAAAGGTTTGGTATGAAT
TATGTTTTAAGTAAATGATCTAATTTCCTTTCATGCCCGGGGGGGTTCAA
AATGGGTTACGGGGATGCGCCGCTGGTCAGGGTACCTTTTTTAACCTCCA
CGAGTCCCAGGTAGGGTCGCAAAAAACACCAAAATAGAAAGATCAGTCCC
TCGTAGGGTGCCTTTTTAGAAAATTTGGGGAAAAAGAAGGAAATTTTAGA
AAACTTTAAAATTTCAGTCCCATTCAGGATCACTTTTTCTACAAATTTCG
CCAAATTTTTGAATAAACGAGTCCCACGTAGGGTCCATTTTTCGAACCTT
AGCGGAGCACCCCCGTCGGTCGGTGAGGGTAGTACCCCCCCCCACCCGGG
TTTCACGCCGTCTAGCTCAAATTTTAGTTTACTATAATATTATGAACCTT
TAGCCATTGATTACTTTGCAAATACTGAAAACACGCTGGGCTGACATCGA
AGCTGAACCTCTTACTAAAAGAACGAGATTGTGCTCTATGGCTAGCCAGT
AGCAAGGTTAAAGTTTTTTTAAAAGCGTCTTTGATATTATTGTTTCGGCA
TCAACTCAAAGAAAATTACTTTTCCTATCCGAAAATCTTTATGGCGATAG
CTGATCAATATCTTGTAATCAACCCCATCTTATCCATCCCTGTTTTAAAG
CCACGGTGGAGATTTTCCACAATGGGAAATAATTTTTTTATCGGAATCCC
AATAGGGATAAAGATTATATTCTTCCCAGCCTAAAAAATCCAGTAGGAAT
GGTCTTGGAGTGCAAATTATTACCCTGAGTATCAGAGGCTAAGTTTTCAA
AGAAAATAGTAACCTCTGAAGACAAATAATAGAAATTTTATCGCCCATGT
GTCAATCTAATCACTGTAGAAAAAATCAAAGATGAAGAGCAAATATTACC
ATATTAATGTCTAGCAGACTGTATCAGTATGCAGTTTACTATTTACGAAT
TCCCCAGAAACCTCCAAGTGTAGTTGAAATGAGTTTACTTCGAAAGAAAC
CTTTTACATGATCCCCAAATGTATAACAGTAATTACTAAACTTTTAATTA
TGGAAATCTCACTTTAATTGAATCGAAATAATTGACAGACTTTATGTTAT
GATTCTCTATCACTGACTCTTTTTACAAAGCATTGATGACTTTTTGTAAG
TTGTGTTTTCAACGACGGGAATAAAAATATCGACTATGATGCTCATCCAA
GATCTTGGATGGTCGTCATGGTTACTTTTGTCTTAGCTGATTGCGCGATG
AATAGAATCTCGATTCGTCGGCACAGCGTAAATATATGATTTTGAGCTGT
GCTTTTCACCGTAGCAAATTATCCATTGAATTTCAATTGGGATGAAATCG
AAGTCATTTTGCTAATGCAGAATTGAAGGTTATTTTTCCAACCGAGGATG
AAATTGTGGTCGAAAATATTCCATGGGCGAGGGTCCCACCGGGGCTGTGG
CAAAAGGGTGTGATTCAGTAAGGTTAGATTCGGTTCTTGATTTTAGGAAT
TTAAAACCCCGACCCAATTTCTTCCAGATTACATACATGGTATAGACAAA
GATTTTGATGAAGACTTCAGTGACCACTGTTTCGCGTTGTTGTTTGGGAC
AGCACCTCAATCGAAAGGTCGGCAATGCGTGGTCACCAGAAAGTGTATTG
AAGCAAACACCAGAGAAAAGACGGGCGATTATATGCTGACTCATCAGTTC
CTTTATTTCGTTTTTGGATTCCAATATAGTAAGTATATCTCTTTGTCTGC
TGAGTTCCAAATATCGATATAAGAAAAACGGATGAAAAGCAAGCACTCTT
TTTTTTAAACGTTGAGATCCCCGCCCCCTCTAATGCAAAACAAATCATTT
TAGATCTTTAATATGAATATACTACCCCGATGAAATTGAAAGAGAGAAAA
ATTTTGATCACCCCTTCAAACTCTTGAAGCTTCTTTCTCTGACCATTCCT
CAATAACGATAAGGCTACACAGAAAAAAACTGTTATTATTAACTATTGTT
AACAATGAAATTTTAAATATCCGTTAGATTGTGACCAGCAAATAGCCAAA
GCAATGGGAGGAAAACACAAGATGGACGCGTTCTTCAGAAAGATGGCAGT
AAATATAGCATATCAGTTACAAATCAGTGGAAGTCCTAAAGATGCTTTGC
TCCTGGATAGAGAACTAGAACAAGCGATGTTCTGTGCAATGTTTGGAATT
GTGGAATGTACGTCACGTGATTTAACTCTTGATTTTATCAAGTATGTTGA
AGCTGACGGTTGTACCAAGTTATCGAAAGATCGAAAGACAAGAGAAAAAC
GCCAAGATCAATTTCTAGGTAAGAATTGGTCCATCCTCATCCACCCGTGT
ACTCCAGGCTTGATTTACGTTACTGATGGACGCCTGAGATTACCTTGGGT
GTAGCAAATTCCATCTCTATGGCGCTATCAGTAAAGCAATATGAAAAAGT
CGGGATAGACTTTGTCTGAGATATATTTTCATTTAAAGCACAAAATTTAG
CATTGGATTGTTTTCAATTTGTTTTCAAATTTTGGCCAAATTTCTTCCTC
GTATCGTTATAAAATTGTTGGCTATTTTCTATATTCTTACCTATAAAGAG
GAACGAGAATATAGACAAAACAGGAACATTCAAGCTATCTACTTTCAATT
TCGTTTTAGGTGGATGTTCGCAACACACAGATGGATTAATGGCAGCATTC
CTTTCTTTAAGTCTCAGATCTGCACTCATGCTACCCAATTGTAGTTAA Coding sequence (CDS) from alignment at sc0000228_pilon:309016..312263- >XLOC_014318 ID=XLOC_014318|Name=XLOC_014318|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000228_pilon:309016..312263- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCAAGATTATGGCCAGTGGATTTGGTTTTTCTTGTATTTTTCAT
TCAAATATTTGGTGATGGATTATTGACTTATCAAGATGAAAATCTTATTG
GAAACGACGTTATCAAACCAAGAATTTGCTCTGGGTTCAGTGACAATGAA
CATAAATCAAAATACATTTCCGAAATCGTAGCTAGTCTTGATCGCATCAT
AAATCACTTCTCTTTTTACACTGATCACCTGATCGCTGATGGTCTGTTTG
GTTTAAGAATCGCTGAAGGCGTGTTGAAAAATATCGTCCAATATGGAGAC
CGTTACAAACATCACAAAATTGAAGCATTACACTCTCGTTTATCAATGAT
CAATCAACTTTCATATGAAGGAATCACAAAGAGAAAATTACCTTATGATG
TTCAATTCGATAAAATCATGAGGGAACCTTTTGATCGATTGTGGCCATTC
AAAAGCTTCAAAGATTTCAAGAAAGACATTGTGAAAGATGAAGTCAAGAT
TATGGCCAGTGGATTTGGTTTTTCTTGTATTTTTCATTCAAATATTTGGT
GATGGATTATTGACTTATCAAGATGAAAATCTTATTGGAAACGACGTTAT
CAAACCAAGAATTTGCTCTGGGTTCAGTGACAATGAACATAAATCAAAAT
ACATTTCCGAAATCGTAGCTAGTCTTGATCGCATCATAAATCACTTCTCT
TTTTACACTGATCACCTGATCGCTGATGGTCTGTTTGGTTTAAGAATCGC
TGAAGGCGTGTTGAAAAATATCGTCCAATATGGAGACCGTTACAAACATC
ACAAAATTGAAGCATTACACTCTCGTTTATCAATGATCAATCAACTTTCA
TATGAAGGAATCACAAAGAGAAAATTACCTTATGATGTTCAATTCGATAA
AATCATGAGGGAACCTTTTGATCGATTGTGGCCATTCAAAAGCTTCAAAG
ATTTCAAGAAAGACATTGTGAAAGATTACATACATGGTATAGACAAAGAT
TTTGATGAAGACTTCAGTGACCACTGTTTCGCGTTGTTGTTTGGGACAGC
ACCTCAATCGAAAGGTCGGCAATGCGTGGTCACCAGAAAGTGTATTGAAG
CAAACACCAGAGAAAAGACGGGCGATTATATGCTGACTCATCAGTTCCTT
TATTTCGTTTTTGGATTCCAATATAATTACATACATGGTATAGACAAAGA
TTTTGATGAAGACTTCAGTGACCACTGTTTCGCGTTGTTGTTTGGGACAG
CACCTCAATCGAAAGGTCGGCAATGCGTGGTCACCAGAAAGTGTATTGAA
GCAAACACCAGAGAAAAGACGGGCGATTATATGCTGACTCATCAGTTCCT
TTATTTCGTTTTTGGATTCCAATATAATTGTGACCAGCAAATAGCCAAAG
CAATGGGAGGAAAACACAAGATGGACGCGTTCTTCAGAAAGATGGCAGTA
AATATAGCATATCAGTTACAAATCAGTGGAAGTCCTAAAGATGCTTTGCT
CCTGGATAGAGAACTAGAACAAGCGATGTTCTGTGCAATGTTTGGAATTG
TGGAATGTACGTCACGTGATTTAACTCTTGATTTTATCAAGTATGTTGAA
GCTGACGGTTGTACCAAGTTATCGAAAGATCGAAAGACAAGAGAAAAACG
CCAAGATCAATTTCTAGATTGTGACCAGCAAATAGCCAAAGCAATGGGAG
GAAAACACAAGATGGACGCGTTCTTCAGAAAGATGGCAGTAAATATAGCA
TATCAGTTACAAATCAGTGGAAGTCCTAAAGATGCTTTGCTCCTGGATAG
AGAACTAGAACAAGCGATGTTCTGTGCAATGTTTGGAATTGTGGAATGTA
CGTCACGTGATTTAACTCTTGATTTTATCAAGTATGTTGAAGCTGACGGT
TGTACCAAGTTATCGAAAGATCGAAAGACAAGAGAAAAACGCCAAGATCA
ATTTCTAGGTGGATGTTCGCAACACACAGATGGATTAATGGCAGCATTCC
TTTCTTTAAGTCTCAGATCTGCACTCATGCTACCCAATTGTAGTTAAGTG
GATGTTCGCAACACACAGATGGATTAATGGCAGCATTCCTTTCTTTAAGT
CTCAGATCTGCACTCATGCTACCCAATTGTAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:309016..312263 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 982-1068:88 |
| Aaloc | 691-978:720 |
| Aaloc | 490-687:1220 |
| Aaloc | 1-486:3249 |
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