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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000366_pilon:82140..86013- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014256 ID=XLOC_014256|Name=XLOC_014256|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3874bp|location=Sequence derived from alignment at sc0000366_pilon:82140..86013- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTAGAAATGTTGCATTTGTCCTTGGTCGACAATCAAAAATTTTCAT
CCGAGGTGCTCACAGGGCTGCCAATTCAAAACAATCTCGATTCTTAACAC
ATAAATCAGTCCAACTACCCATCTTAACGGCATTTGGATCATACATCGTC
TACAGATCAACGCAAGCAAATACAGTTGATGCAGCTGAGGATCACCAGAA
TGAATCTAAATGGACTTTATACCAATACGCAACATGCCCTTTTTGTTGCA
AAGTTCGTAGCTTCTTAGATTACTATGGTGTTGATTATGAAATAGTGGAG
GTGAATCCTGTCTCAAGGAAGGAGATTAAATTTTCAGAATATCGCAAAGT
TCCTTTCCTAACATCGAAAGAACACCAGGTATCCCTTCTTTTGTCATTTT
GATTAAAGTAATATTCATTAAATGTTATAATCGTAACCACTAAATTCGTT
TTTATAATATATACAGTTTCCATAACTGGAGTCTCCGCAAGGAAAACACA
AATTTGCTCGAGTTAAGGAAATTTCGATTTTAAAGGAGTAAGGTTTGTAA
GGCATTGTTACTGATTGGACGAGAAAACTTGATCAAGTTATAGAGGTGTG
AGTTAAAGAGACTCTCCAAGTGAAAATCTTCCTTTCCATGCAATTTTAGA
ATATGCAATATTTGAATATAAAAAAAATCAATGTGTTCCTCGTTTCAGTT
GAACGGCTCTTCGTTGATATGCAGTGTGTTGAAAACACAACTTATCACAG
AAAGTGAAGTTTCAAAGATTTTAACATACTACCCTATTCTTGAAAATGAA
GATGGGAAAAAGAAGAGCTTTGACTATCAAAACATATACAATGTTATGTA
CGAGACTGGCATTGGTAAAGAAGCGCATGACAAAGTCAGGTATGGTAAGA
ATTGGCCAAATAGGTAGCAAATATTTTTTTTATCACGGTATTAACAGTTT
TTTAGCGGATGCGTGAGAACTTTTATGACTGATTGTGTATCTTCATACCA
GAAGAAATTTACTTAGAAACTTTACGTTCTTAATAGGGAACAGAATCAAA
GTGCATAAATCAAAGTTGTACTGTCAGAACTGGCTGCAACTACCAACTTC
ATATTTGTTTATTTCCATTGTTTTTTGAATCGCCAAACCATTTATCTAAC
AACTTTTTTTCATCCTCTTACCTTATTTTGAAGGGACGAAATGAAATGGA
GACGGTGGGTAGATGAGGTGTTCGTCCACACATTATCACCAAACATCTAT
CGTACATGGGGTGAATCACTGCAAGCTATGGAGTATATCACCAAAGTTGG
TAATTTCTCTGACTTTGAAAGGACTCTCATCTATTATTCTGGTGCAGTGG
CGATGTACCTTATTGGAAAACGGCTGAAACACAGGTTTAACCCTTTTTTT
TTACTTACAATTTTTACAAGTGATGATTTTCGATAAAATACTTTTTGCAT
CGGTACAAAGGGAAAAACATTGACTAAAAATTTTGTAAGGATTCAACAGA
TTAGATTGGAAGTTTTTAATATTGATTTTTTCAATGGTTCCCGGAGGGGG
TACTTAGGCTAGTGAAGGGTATGGGTATGTGCTGCCCTTAAGGGTACCTT
TTGGAATCTGACAGTCTCGGTAAGGGTTGGAAAGATTGGAATTTTAAATC
TCAGTTCCATTAAGGGTCATAATAAAGGGGAATTTTTTCACCCCTAAAAT
ATCTAAATTTTGTCAAATTTGTCCCGAAAAGGATCGTAAAATTCACATAA
TATTCCAATTTTCCCTTTTTAGCTCCGCTAAGTGTTCGAGGGTCAAAAGA
CGGGCGACACCCCCCCAGTTATCCTGTAAGCGTAGTACCCCTCAACCCGG
CAAAGCATGGTTTTAGTGGTTTACTTATTATGCTTTTTGTTCCATCAGGC
ATCACTTGAGGAATGAGGTTCGTGAGAGTTTGTATGAAGAAACATATCGC
TGGTTAAAAGCTGTTGGTAAAAACCCTTATCAAGGTGGTGACCAACCCAA
TATGGCTGATTTGGTATGTCTATCTTTCTACCTGTCTTAGTACAGGCTAC
ATAGAAACCAGTGCAAATTTAACCAACATTGAACCTTTCCTATGTTAGAT
ATGTTGTACGTTGTCGCAGGCGGTTTGAAAGTCTGTCGAAGAGGCTCGTC
CTCTTTTTTTTCCTACGCTATCATTTATCTTGCTGCGAAATACAACCATA
GATATCTTATACCGGGTGCGCCACAAAAAAGTTTCTTTCTTTAAAACTAA
TTTTCTCGAAATCTAGAATTGTTTAGAAAAACCGTTCCTATTTCATTGGA
AAGAAGAAAGATAAACTTAAATTTTTATGGGTCATTTATTAAATTCGATT
CATTAGATCAAAAGTTATATACTCAATTAAATGAAAAAGTTACTTTCTGA
AAGTGCTCAAAAACGTTAAACATCAACCTATCAAATTAAACAGAAGCATA
ATTGGTAACCTCAATTTAGCCCCAAAAATACACCTTATAAGAAATCCAAA
TTAGTTTTTGCTTAGAATGAGGCCTACTTGAGGCATATTTAAATTTTGAG
CAATTTTGCTTCAGTAGGTATTGATTTATAAGCTTTAGAATGAGGTAACC
TCATTTGGGTAACCTCAATTTAACCACATCATATTTCTAATTATTACTCA
GGATTGAAGTGACCTCTTAAATTCGCGTTTCTTCTAAATCCACGAGAAAT
TTCTATACTTGAGTTCTTCAAAGTTTTGATATGGCAACCTCAAAATTTCA
CCAGATATGGTATCAGATATGACAGAAGGTAGAAATGTCACAAAACCCCC
TTTTATTTCTGACTGTGTTCACATGTACATCGTTATCTTCGTTTCAGTCA
TTAAAAATGATAATTAGCTGTCTAAATGACCTATTGTTATATAAAGGAAG
GTTGAATTTCAATAAAAGGCAGAAAATTCGTCGAAAAAGGTAAAAAAATC
TGGTAAAATTCATAAAAATACATCAAATATGGGTTTCGAGATACATCCAG
CCTTACATAGACTTTATCCAATCTAAAACCAAAAATCGGAGGAAAATTTC
GGTAAAAGTAAATTAAAGTGATTTTGATGAAGATTTTAAACCCTTTCGGC
CTTTCAGTTTCGAAATTTATGTGTTTGATTATTGAAAAATGCTTTTAATC
ATGTAAAGGCTAATGTGATTGACAATTTTAATATAAAAATTTGATAGGTC
GATTTTCAACGTTTTAGAGCACTTTCTGAAAAGAACTTTTTTATTCAATC
GACGATAATTTTTGATCTAATGAACCAAATTAATAAATGACCCATCCAAA
TTTAAGTTTATTTTTTTTCTTTACAATGAAATAGGAGTGGTTCTTTTAAA
ATTTTTAGATTTCTAGAAAGGTAGTTTCAAAGAAGCACTAGATAGAGCTA
CTCCGTCCCTATTTTGAATCAAAATAATCCGACATCTTTGATAAGTAGAC
CATAGTTCGGTGCCGGCAATTTGATTGATCAAGCCAATCTTTCGCCTTGT
CGCTTCGCGCCATTAAGGTTTTTTTGCTTGGTTAAACAAATTGCCGGTAC
CGAACTGTGACCTACCTTCATCAAAGATGGAACATTATTTTGCTTCACCT
GCCGTTGCTTGGGAAATATAGAGTAACTCTACCTTGTGTTTTATATAAGA
TATCTATGAATACAATAAATCAGTCTTGACAGTAGTTTCTTATTATGATA
TCAAAATTTCCTTCATTTTCACAGAATATGTATGGAGTTTTGAGTGCAAT
CGAAGGGTATGACGCGTTCTCAGACCTTCTACAAAACACCAATATTGGTC
CTTGGTACCAAAGAATGAAAACGAAAGTGAAAAACAAAGATGGTATCCAA
GAAGTGCAACGACTTAAAGCAATG Coding sequence (CDS) from alignment at sc0000366_pilon:82140..86013- >XLOC_014256 ID=XLOC_014256|Name=XLOC_014256|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2070bp|location=Sequence derived from alignment at sc0000366_pilon:82140..86013- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTAGAAATGTTGCATTTGTCCTTGGTCGACAATCAAAAATTTTCAT
CCGAGGTGCTCACAGGGCTGCCAATTCAAAACAATCTCGATTCTTAACAC
ATAAATCAGTCCAACTACCCATCTTAACGGCATTTGGATCATACATCGTC
TACAGATCAACGCAAGCAAATACAGTTGATGCAGCTGAGGATCACCAGAA
TGAATCTAAATGGACTTTATACCAATACGCAACATGCCCTTTTTGTTGCA
AAGTTCGTAGCTTCTTAGATTACTATGGTGTTGATTATGAAATAGTGGAG
GTGAATCCTGTCTCAAGGAAGGAGATTAAATTTTCAGAATATCGCAAAGT
TCCTTTCCTAACATCGAAAGAACACCAGATGATTAGAAATGTTGCATTTG
TCCTTGGTCGACAATCAAAAATTTTCATCCGAGGTGCTCACAGGGCTGCC
AATTCAAAACAATCTCGATTCTTAACACATAAATCAGTCCAACTACCCAT
CTTAACGGCATTTGGATCATACATCGTCTACAGATCAACGCAAGCAAATA
CAGTTGATGCAGCTGAGGATCACCAGAATGAATCTAAATGGACTTTATAC
CAATACGCAACATGCCCTTTTTGTTGCAAAGTTCGTAGCTTCTTAGATTA
CTATGGTGTTGATTATGAAATAGTGGAGGTGAATCCTGTCTCAAGGAAGG
AGATTAAATTTTCAGAATATCGCAAAGTTCCTTTCCTAACATCGAAAGAA
CACCAGTTGAACGGCTCTTCGTTGATATGCAGTGTGTTGAAAACACAACT
TATCACAGAAAGTGAAGTTTCAAAGATTTTAACATACTACCCTATTCTTG
AAAATGAAGATGGGAAAAAGAAGAGCTTTGACTATCAAAACATATACAAT
GTTATGTACGAGACTGGCATTGGTAAAGAAGCGCATGACAAAGTCAGTTG
AACGGCTCTTCGTTGATATGCAGTGTGTTGAAAACACAACTTATCACAGA
AAGTGAAGTTTCAAAGATTTTAACATACTACCCTATTCTTGAAAATGAAG
ATGGGAAAAAGAAGAGCTTTGACTATCAAAACATATACAATGTTATGTAC
GAGACTGGCATTGGTAAAGAAGCGCATGACAAAGTCAGGGACGAAATGAA
ATGGAGACGGTGGGTAGATGAGGTGTTCGTCCACACATTATCACCAAACA
TCTATCGTACATGGGGTGAATCACTGCAAGCTATGGAGTATATCACCAAA
GTTGGTAATTTCTCTGACTTTGAAAGGACTCTCATCTATTATTCTGGTGC
AGTGGCGATGTACCTTATTGGAAAACGGCTGAAACACAGGGACGAAATGA
AATGGAGACGGTGGGTAGATGAGGTGTTCGTCCACACATTATCACCAAAC
ATCTATCGTACATGGGGTGAATCACTGCAAGCTATGGAGTATATCACCAA
AGTTGGTAATTTCTCTGACTTTGAAAGGACTCTCATCTATTATTCTGGTG
CAGTGGCGATGTACCTTATTGGAAAACGGCTGAAACACAGGCATCACTTG
AGGAATGAGGTTCGTGAGAGTTTGTATGAAGAAACATATCGCTGGTTAAA
AGCTGTTGGTAAAAACCCTTATCAAGGTGGTGACCAACCCAATATGGCTG
ATTTGGCATCACTTGAGGAATGAGGTTCGTGAGAGTTTGTATGAAGAAAC
ATATCGCTGGTTAAAAGCTGTTGGTAAAAACCCTTATCAAGGTGGTGACC
AACCCAATATGGCTGATTTGAATATGTATGGAGTTTTGAGTGCAATCGAA
GGGTATGACGCGTTCTCAGACCTTCTACAAAACACCAATATTGGTCCTTG
GTACCAAAGAATGAAAACGAAAGTGAAAAACAAAGATGGTATCCAAGAAG
TGCAACGACTTAAAGCAATGAATATGTATGGAGTTTTGAGTGCAATCGAA
GGGTATGACGCGTTCTCAGACCTTCTACAAAACACCAATATTGGTCCTTG
GTACCAAAGAATGAAAACGAAAGTGAAAAACAAAGATGGTATCCAAGAAG
TGCAACGACTTAAAGCAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000366_pilon | genome | sc0000366_pilon:82140..86013 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 886-1035:151 |
| Aaloc | 772-885:1976 |
| Aaloc | 571-768:2691 |
| Aaloc | 379-567:3177 |
| Aaloc | 1-378:3875 |
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