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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000366_pilon:157104..160715- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014251 ID=XLOC_014251|Name=XLOC_014251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3612bp|location=Sequence derived from alignment at sc0000366_pilon:157104..160715- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTTCAATACGCATCAAGCGATTTGAAAATCAAAATTAGTTCAACAGG
ACACATACAATGTATAACACCAGCAAGTATACCATTACCCAAGATATCCT
GGTACAAAGATAGAAAAGCATTAACTGGTTACAATAATCAAAGTCAATTG
CTTGGTGATGGCAAAAGTCTAACAATTACTTTGGAATTGTCAAATTTTGG
TTTGAACAATGTAGGAACCTATCAATGCAAAGCTGAGAATGAACTTCTTG
GTATCACGAGGGAAAGTCATTTAATTAATGTTACTTTAAAAGGTTAGATA
TTCTTTGAGTTATTTTTTTGTTTTTTTTAACTATAGAACTGATCAAAACA
ACAATTTGCAAGGCAAGTTTTTTAAATAGATTTACTGTAGACAAGATTTG
GAATAGCTTGGAACATTTTCACTTCACTCATTAAGATTCATTAAAATTCA
TTCCTGAATTAAGAAAGATTTGATAATACTTTACTTTATTGATGGAACAA
TTTATTACCTTCGCAAAATTGATCATCCAACATGCAACTACCACAAAAAC
AATTTTTTGCTATCCAAAATGTAACATAGTTCCAAATTTTCCTATAGCTG
AAAAATCATCGCCTTACTTCTTGCATCAACCAACACCTTTGACTGTTGTT
CGATTCCTGTCTGGAATGTTCGATTGTGTCATCCTTGGTGAGCCAATGCC
TTCCATTCAATGGTTCAAAGGGAACACACGACTTCAAAACAATAACCATT
ATCAGATATTATCAAATGGTAGTTTGATAGTTCGAGATGCTATTGAGACA
ATGGAGGGACTTTATAAATGTGTTGGAAGCAATTTTTATGCATCAATAAC
GTCAGTTCCTGTGCAACTTACTGTGGCTTGTGAGTATTATTTTTTCACAC
TTATACTATTAAATATAATTCCATTTATAAAGTTAATGTATTTCGATGTC
GAAGGTCCTAGCCACGTAGATTTAGTCATATTTTAATTCAATTTGATTCA
TCAGAAGAGCTTGAGCAAGCTTAAGATCGAGTGAAAAGTACAGTCAAGCC
GTCATAGTGTTGTAACTTTTTCGTCTGTAGAATAAAGATCCATCCAATTG
AGGTCTTTAGCTAGAATTTCCACCTGATTGTAAGTCTTCGAAGATAAAAA
TTTCTAGTCAAGATTCACCAAAGGTGAAAGTGGTTGCAACACTGAACCTT
AAGAATGTACTTCAAAGTCTATCGAAACTGTTGATTTCGTTTACATCTGC
TATTCATTTAATTTTATTACAGTTATTGATTATGATTTCAAGTTGAACCC
AGAATCCTTCAAAATCACACTCTTACATCGTGACCTCATTCTAAACTGCA
TTCCGCCAAAAAGTCATCCCTTGAACCCACAAATCGAATGGTCATTCAAT
CACAACGACTTGGGGATATCAGAAAGACATCAGTTATTAGCCAATGGTAG
CTTACTGATTCAGAATGTGACTCGTTCAGATGAGGGTAGCTATTTTTGCA
TGGCAACTAATTCATTCACCAAAGAAACGAGATCTTCAACAAATTCTAAT
GTCACCGTTTATGGTCAGTCTTTAAATTTTGGTTTGACCGTCTTTTTAGT
AACTTTTAAGGACATTTTTAATGTAGATTTTAAAGCTAACCTTCTTTGAG
ACTTTTCTCTAGTTTCACTCATAGCTTCATTCCTTAGTTTCAGATTTTCC
AAATGTGCACTAGGAAAGAGCTTTAGTCATTAAGGGGTCATTAGTCATTT
CATGCAAGTTGCTGAAAATACTCTGGAATTACCAAACTCTCTTCTAACTA
TAATTCTACCTGTGGCTCTAATTTTCTGGCTCTTTTTCTACCACTTCTCG
AAAAAAATAGTCTTGATGTATTTTCACTTATTTATCTTCAGATATGAAAA
TAAGGCTAATTTTTCAGTGTTTGACTTGAGTTTTTTTATCGCCCTTTGAC
AGCGAGGCTTGTTTTGGTTAAAAGTCTCATACTGAAATATACCAATCATG
ACATTAAAAATTGTGTAATTTCATTGTATTTTTGTCCTCTTTAGTCCCGC
CCACCATATCAACCAGTACTAGAATCAAAGTAAAAGTGGGAGACGCGATC
ATGATCACTTGCCAAGCCAGTGGTATTCCAACGCCATCAATCACAATTTC
ACGGAAATATGAGAATGGAACTGTGTTAGAAAAATCGAACAGTTTTGTTG
TGTTATCTGCAACAGTAGAAGATAAAGGAATATATTTGTGCAGAGCAGAA
AGTGACGCTGGTGAAGCTAAAGTCAATATCTCACTTTCAGTCTTGGGTAA
ATCTTTTTTATATGATGATACAGCAGTGTATCATGGTCAAATCTTTAGGA
AAAAGTTTCTCGTGATCTTCTGAATGGACAATTCCTGGAAAGTGAGGGAG
ATCTTCAGCATTTTAGTTGACTTACATTATGGCTCTATTTCGTATTTGGT
CTGATACACTTTAGAGCAGTCTGTAGACTTAAAAAATGATAGGGCTTTGC
AAATTTATTGTACACCTCCTTCCTTGGATGAATACCTGAATTTCCTGGCC
TGTGACTACAATGAGACATAAACTTCAATTTCGTTTCAAACTTTTTTTAC
AGTTCCACCCTACATTGGCATTCCATTAAAGAATCAAACTGCCGTTTATA
AGCAAACGAGTCAAACCGAATTCACATGCTCCATTAAAGGTCAACCGAAA
CCTTTAATTCATTGGATGTTTCGTGGCCAACCTCTCCAGGAATTCAAAAA
CAAAATTTCATTTGCTATAAGAAATGAGAGTTTGACCTTGGATCACGTGG
ATAAAGTGTATGAAGGTTGGTTCGAATGTTATGGTACGAATGAAGTAGGA
AATATTTCGTCATCAGCATTCCTGAAAGTCTACGGTAATATTTCATTTTC
TCTAAGGATTATGGGTGTGATTTCATTTTTTGATGTCGCTTTACTTGAAA
GATTCTATTGAGTATTATTTAATAGGCGTTCGATTTGAAAATCCCTTCCT
TCGTAATATGTTTTGAATTGTCTTATTACGAGTTTCATACAATATCTAAA
TATATTTTTCTTTCTAAATATATTTAATTTTTTATTTTTAAAGCCCGGAG
GGGACTAGAAACGAGTGTTTAATCGTTCCCTTAAGATTTGCGTTCAATAA
AAATTGAATTCTGAATTTGCAAAAATATGTTGTATTTGGTGTCTTTGGAG
AAATATATTTGCATTATTTCTCACCTCAGGATCGTTTCTAGCCCTGTCTG
GGCTTTAAATTCAATGGTGATGACGACTGACCAGCAAATACATTTTTTAT
TTTTAAGAACGACCTGTTTTGTTGAACTCATCCGCCAGTTCGGTTGAAAT
TCCACATTTTGGTAACGCCACTCTATTCTGCCAAGTCCAAGGTGATCCGA
AACCACACATCCAATGGACCTTCAATAACCGTTCATCAATACCTCACTCC
ATCATCACAAAAACCATTTCATATACAAAGAATCGAACTTATTTTAGTGA
AAGTCAACTTCAATTGAGTCACGTGACTTATGAATTGCATCATGGGATGT
TTGAATGTGTTGTTGAAAATCTGTATGGTCGTGTTGTCCAACAGATACAA
GTTAGTGTCTCA Coding sequence (CDS) from alignment at sc0000366_pilon:157104..160715- >XLOC_014251 ID=XLOC_014251|Name=XLOC_014251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3408bp|location=Sequence derived from alignment at sc0000366_pilon:157104..160715- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTTCAATACGCATCAAGCGATTTGAAAATCAAAATTAGTTCAACAGG
ACACATACAATGTATAACACCAGCAAGTATACCATTACCCAAGATATCCT
GGTACAAAGATAGAAAAGCATTAACTGGTTACAATAATCAAAGTCAATTG
CTTGGTGATGGCAAAAGTCTAACAATTACTTTGGAATTGTCAAATTTTGG
TTTGAACAATGTAGGAACCTATCAATGCAAAGCTGAGAATGAACTTCTTG
GTATCACGAGGGAAAGTCATTTAATTAATGTTACTTTAAAAGAGATTTCA
ATACGCATCAAGCGATTTGAAAATCAAAATTAGTTCAACAGGACACATAC
AATGTATAACACCAGCAAGTATACCATTACCCAAGATATCCTGGTACAAA
GATAGAAAAGCATTAACTGGTTACAATAATCAAAGTCAATTGCTTGGTGA
TGGCAAAAGTCTAACAATTACTTTGGAATTGTCAAATTTTGGTTTGAACA
ATGTAGGAACCTATCAATGCAAAGCTGAGAATGAACTTCTTGGTATCACG
AGGGAAAGTCATTTAATTAATGTTACTTTAAAAGCTGAAAAATCATCGCC
TTACTTCTTGCATCAACCAACACCTTTGACTGTTGTTCGATTCCTGTCTG
GAATGTTCGATTGTGTCATCCTTGGTGAGCCAATGCCTTCCATTCAATGG
TTCAAAGGGAACACACGACTTCAAAACAATAACCATTATCAGATATTATC
AAATGGTAGTTTGATAGTTCGAGATGCTATTGAGACAATGGAGGGACTTT
ATAAATGTGTTGGAAGCAATTTTTATGCATCAATAACGTCAGTTCCTGTG
CAACTTACTGTGGCTTCTGAAAAATCATCGCCTTACTTCTTGCATCAACC
AACACCTTTGACTGTTGTTCGATTCCTGTCTGGAATGTTCGATTGTGTCA
TCCTTGGTGAGCCAATGCCTTCCATTCAATGGTTCAAAGGGAACACACGA
CTTCAAAACAATAACCATTATCAGATATTATCAAATGGTAGTTTGATAGT
TCGAGATGCTATTGAGACAATGGAGGGACTTTATAAATGTGTTGGAAGCA
ATTTTTATGCATCAATAACGTCAGTTCCTGTGCAACTTACTGTGGCTTTT
ATTGATTATGATTTCAAGTTGAACCCAGAATCCTTCAAAATCACACTCTT
ACATCGTGACCTCATTCTAAACTGCATTCCGCCAAAAAGTCATCCCTTGA
ACCCACAAATCGAATGGTCATTCAATCACAACGACTTGGGGATATCAGAA
AGACATCAGTTATTAGCCAATGGTAGCTTACTGATTCAGAATGTGACTCG
TTCAGATGAGGGTAGCTATTTTTGCATGGCAACTAATTCATTCACCAAAG
AAACGAGATCTTCAACAAATTCTAATGTCACCGTTTATGTTATTGATTAT
GATTTCAAGTTGAACCCAGAATCCTTCAAAATCACACTCTTACATCGTGA
CCTCATTCTAAACTGCATTCCGCCAAAAAGTCATCCCTTGAACCCACAAA
TCGAATGGTCATTCAATCACAACGACTTGGGGATATCAGAAAGACATCAG
TTATTAGCCAATGGTAGCTTACTGATTCAGAATGTGACTCGTTCAGATGA
GGGTAGCTATTTTTGCATGGCAACTAATTCATTCACCAAAGAAACGAGAT
CTTCAACAAATTCTAATGTCACCGTTTATGTCCCGCCCACCATATCAACC
AGTACTAGAATCAAAGTAAAAGTGGGAGACGCGATCATGATCACTTGCCA
AGCCAGTGGTATTCCAACGCCATCAATCACAATTTCACGGAAATATGAGA
ATGGAACTGTGTTAGAAAAATCGAACAGTTTTGTTGTGTTATCTGCAACA
GTAGAAGATAAAGGAATATATTTGTGCAGAGCAGAAAGTGACGCTGGTGA
AGCTAAAGTCAATATCTCACTTTCAGTCTTGGTCCCGCCCACCATATCAA
CCAGTACTAGAATCAAAGTAAAAGTGGGAGACGCGATCATGATCACTTGC
CAAGCCAGTGGTATTCCAACGCCATCAATCACAATTTCACGGAAATATGA
GAATGGAACTGTGTTAGAAAAATCGAACAGTTTTGTTGTGTTATCTGCAA
CAGTAGAAGATAAAGGAATATATTTGTGCAGAGCAGAAAGTGACGCTGGT
GAAGCTAAAGTCAATATCTCACTTTCAGTCTTGGTTCCACCCTACATTGG
CATTCCATTAAAGAATCAAACTGCCGTTTATAAGCAAACGAGTCAAACCG
AATTCACATGCTCCATTAAAGGTCAACCGAAACCTTTAATTCATTGGATG
TTTCGTGGCCAACCTCTCCAGGAATTCAAAAACAAAATTTCATTTGCTAT
AAGAAATGAGAGTTTGACCTTGGATCACGTGGATAAAGTGTATGAAGGTT
GGTTCGAATGTTATGGTACGAATGAAGTAGGAAATATTTCGTCATCAGCA
TTCCTGAAAGTCTACGTTCCACCCTACATTGGCATTCCATTAAAGAATCA
AACTGCCGTTTATAAGCAAACGAGTCAAACCGAATTCACATGCTCCATTA
AAGGTCAACCGAAACCTTTAATTCATTGGATGTTTCGTGGCCAACCTCTC
CAGGAATTCAAAAACAAAATTTCATTTGCTATAAGAAATGAGAGTTTGAC
CTTGGATCACGTGGATAAAGTGTATGAAGGTTGGTTCGAATGTTATGGTA
CGAATGAAGTAGGAAATATTTCGTCATCAGCATTCCTGAAAGTCTACGAA
CGACCTGTTTTGTTGAACTCATCCGCCAGTTCGGTTGAAATTCCACATTT
TGGTAACGCCACTCTATTCTGCCAAGTCCAAGGTGATCCGAAACCACACA
TCCAATGGACCTTCAATAACCGTTCATCAATACCTCACTCCATCATCACA
AAAACCATTTCATATACAAAGAATCGAACTTATTTTAGTGAAAGTCAACT
TCAATTGAGTCACGTGACTTATGAATTGCATCATGGGATGTTTGAATGTG
TTGTTGAAAATCTGTATGGTCGTGTTGTCCAACAGATACAAGTTAGTGTC
TCAAACGACCTGTTTTGTTGAACTCATCCGCCAGTTCGGTTGAAATTCCA
CATTTTGGTAACGCCACTCTATTCTGCCAAGTCCAAGGTGATCCGAAACC
ACACATCCAATGGACCTTCAATAACCGTTCATCAATACCTCACTCCATCA
TCACAAAAACCATTTCATATACAAAGAATCGAACTTATTTTAGTGAAAGT
CAACTTCAATTGAGTCACGTGACTTATGAATTGCATCATGGGATGTTTGA
ATGTGTTGTTGAAAATCTGTATGGTCGTGTTGTCCAACAGATACAAGTTA
GTGTCTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000366_pilon | genome | sc0000366_pilon:157104..160715 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1543-1701:160 |
| Aaloc | 1402-1542:304 |
| Aaloc | 1120-1398:1009 |
| Aaloc | 868-1116:1567 |
| Aaloc | 577-864:2339 |
| Aaloc | 295-573:3014 |
| Aaloc | 1-291:3613 |
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