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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000240_pilon:192877..196179+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014214 ID=XLOC_014214|Name=XLOC_014214|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3303bp|location=Sequence derived from alignment at sc0000240_pilon:192877..196179+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGATCGTACTCGTGTTAACTTTGGTTGTTGCTCTCTGGTTTGG
ACTTTCTGAAGGATCCGAAATTAGATGTCCGTGTCTATCATGTTTAAACA
ACAACGCCAACTGCGCACCCTTACGGCGCCCTTTTACCAAAGTACCAGGA
CAATTTCCCAAGGAAATCAGAAGCATTCACATGCAAAACAACAAGATTAC
AAGAATCACTGCAAAAAGTTTTGGTCATTTACCAAAGTTGACTTTATTAC
GACTTGATCAGAATCAGATTGATGAAGTCTGGCCTGGAGCATTTGGAGGA
ATGCCAAAattgaatgatttgaatctaCAGAATAATAAAATTATGGTGTT
ACCAGACGACTTTGTACACGCTGACGCCCCTTTGGCTAAAGGAATCAAAT
TGAACAACAATGGACTGACAACCTTTCCCTTGAGTATACTCAAGAAAACT
CGCACTTATATCAACGTCAACGGTAATCCAATAAATTGTGATTGTTTCTC
AATAATACCTAAAGATCTCAAGAATAAAGCGATTGGTACTTGCGCCTCAC
CTCCTAGCGTGAAAGATCGTCGCATCTCCTTGATCACCTACAAAGATGTG
AACTGTTCGTCTTGTGATGGATTTAACTGTAACCACGGCAACTGTTATTC
CTACACAACTCCACGTGGCCTTGAAAAGCGACAATGTATCTGTGACATTG
GATACAAAGGAGAACGTTGCAACATCAAATATGACCCCGTTCTTCCCACT
GAAACACCAGATTTAACGACTGCTCCTACGGCACCAGGGACATCCACAGT
TTCTTCAACAACGCCTTCACAACCAAACGAATCTACTCCACAACCCAAAA
CAATCTCCAATACAAAGTCTCCAAGGGAAACTACAGAATCACCACAAACC
AAGACACCAGAAAAAACGAAACCAACTTTTACCAAGCCTACAACAGatac
aaaatcaactcaaaagaTAGCACCATCAACAAATACTGATCCTGCAGTTG
TTAGCACATCTCAGACACCGGCCGAACCGATAACAGGTTCACCAGAAacc
acctccaccaccacccTTGTTATCACCACTGAAAATCAACCAAGAACAAC
GAGAAATATAAGAATAAAGAAGACGACAAAACCAACAACCACCGAAGCCA
CTACCGTTACAACAGAATCAAAGTCTAGAAGTTCTTCTGGAGCACCAGTT
ACAACAACAGCTCCACCAACAACAAGCATTAAAACAACCAAGGAGGTTCC
TAatccaacaaaatcaaaatcaacagATGAGCAAACACCTTCAATTACAG
TTTCAACTACCACAGATTCATCATCGCAAACAACCGAATCTCCCAAAAAG
GTAACAAAAGCTCCTAAGAAAGTGACGACGACACCGAAGACAACTAAAAC
AGTAAAGAAGACAACAGAAGAAGACGCAACAGAGTCCACGACTTCATCAA
TAACACCAGAAAGCACTGGTAAACCATCATCAAAGACCGCTTCAACGTCC
CGACAAGAAACCCCTACAACACGTACAACACCTTCTACAAGTACAAAAGA
AGAAACAACGATCCAACCTACCAAGACAAATATCGTAAGAtattttcttt
cgaaattttcaaagtagtttagaattatttttttgccaaattgaGCCTCG
TGTTCAAACCCGATGACGTTCTAAATTTTCCAATATATCGAGTCAGgtta
aaaagcgtgtattatgaCTCATCAAGTCGTAAAAAGGGGGTTTCGTAATT
CGTTAAAGACTTGTCCATAATAATTGACGAAAAAGTTCCTCTCCTAAAAA
TTGGACTATACGTTTCCAAACAAAATACAAGAATATTTCATTGTATTTAG
GTGACAATAACCAAGACGTTACAAAGATGtcagaaacttttgaaaaatgc
aatcAATCGACCAGTCCGTATGTTTCTCCATCCAAGCGAAGATTATGAAA
AAGTGGAAAACGCTGTCCAAAAATTCAGCGCTCTGAGTGACCTGAAGAAT
CCTGAAAAACAGTCACAGGTGAGAgttgaaaaattgataattcTTTGGAT
AACCTTATGTactacccccttctcacagacccactgggacccctttccac
tagaaaaattggccaaaatattgtccccggtggaaaaattatacttcaat
tttcgtccccattgaaaataatcagataaaccaatcctccctgcaaaata
ttatgctattttcccatccccactgaattttctgacttgaaaacaaaaga
atttaaatcccctcTCATAAAAATAAGGGAATATATCGATCCTCGTCGAG
TGAAAGTCTGTTAATTTTATCCCAACTGGCTGAAAGAATTCTGCCGGGTC
TGTGTGAAGGGGGTGTTATACTCTGTACAGAGTGTATCTTACGTATAACG
TAGTGTACGGAAAAGAGATGTGGGGTCTGTTTACAGACAATAGTGTTCGA
AGCTGTCAAATGTTTAGTACGAATAacgataataatttttttcgtcACTG
TgattattgaaagtttcttgACTTAATCtattaaaaataacttttgacaA
TGATAGTTTCCTTTAAAATCATTaattctttatttgaaaatgcaTCATCA
TTTCCCTGGCTGGTTTCTATATTAATATGGCAATGCGCTGATTATTAGAT
ATTGAGATTAGATATTAGCAGTTTCAAATACTTCACAAATGCCTGATTTT
CCTAAATGTATTTGTATTCCAAAATTAGGAAGTATACTTTGTCATCAATC
ATTACCGTAAACAAACCAATGAAATAAACAAGAGTAGCTAACAACTATCC
acgtagcctatactagacgtcacccgcgttttttatGCAACTAAGAAGAA
ACGCGATGAAAAATTAGTGAGGTACTCGCTATTATCCATACTACTACTTG
TAAAAGTTATGATGACTTATTTTAAAACGAGGATATGCTTATAGTgacgt
acatgttttttataagcatacaaaaatctaaaaactggCTCGGAGATGAC
TAGATCgagagatttacaaagctgTAAAATGCTTtaaggatgcttatatc
ctaaaaaaaaattttaggaaattccgaaataccgtaaaATTCCAGGCAAA
ACCAgcgaaatttggaaaatttatttAGGCTCAAGATAATGCTTAACATA
CGCTTAAATATGTAATTAAGGAAAAGGCCTATctatcttctttttcttat
ctcTCATTAACAttgatttgttttgacttttttatttcagtacGATCCTA
TTCAGCTCTGTGTGATCAACCTTCTTGTTCAGTTGGTCAAAGAAGAAGAT
TAA Coding sequence (CDS) from alignment at sc0000240_pilon:192877..196179+ >XLOC_014214 ID=XLOC_014214|Name=XLOC_014214|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3630bp|location=Sequence derived from alignment at sc0000240_pilon:192877..196179+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAGATCGTACTCGTGTTAACTTTGGTTGTTGCTCTCTGGTTTGG
ACTTTCTGAAGGATCCGAAATTAGATGTCCGTGTCTATCATGTTTAAACA
ACAACGCCAACTGCGCACCCTTACGGCGCCCTTTTACCAAAGTACCAGGA
CAATTTCCCAAGGAAATCAGAAGCATTCACATGCAAAACAACAAGATTAC
AAGAATCACTGCAAAAAGTTTTGGTCATTTACCAAAGTTGACTTTATTAC
GACTTGATCAGAATCAGATTGATGAAGTCTGGCCTGGAGCATTTGGAGGA
ATGCCAAAattgaatgatttgaatctaCAGAATAATAAAATTATGGTGTT
ACCAGACGACTTTGTACACGCTGACGCCCCTTTGGCTAAAGGAATCAAAT
TGAACAACAATGGACTGACAACCTTTCCCTTGAGTATACTCAAGAAAACT
CGCACTTATATCAACGTCAACGGTAATCCAATAAATTGTGATTGTTTCTC
AATAATACCTAAAGATCTCAAGAATAAAGCGATTGGTACTTGCGCCTCAC
CTCCTAGCGTGAAAGATCGTCGCATCTCCTTGATCACCTACAAAGATGTG
AACTGTTCGTCTTGTGATGGATTTAACTGTAACCACGGCAACTGTTATTC
CTACACAACTCCACGTGGCCTTGAAAAGCGACAATGTATCTGTGACATTG
GATACAAAGGAGAACGTTGCAACATCAAATATGACCCCGTTCTTCCCACT
GAAACACCAGATTTAACGACTGCTCCTACGGCACCAGGGACATCCACAGT
TTCTTCAACAACGCCTTCACAACCAAACGAATCTACTCCACAACCCAAAA
CAATCTCCAATACAAAGTCTCCAAGGGAAACTACAGAATCACCACAAACC
AAGACACCAGAAAAAACGAAACCAACTTTTACCAAGCCTACAACAGatac
aaaatcaactcaaaagaTAGCACCATCAACAAATACTGATCCTGCAGTTG
TTAGCACATCTCAGACACCGGCCGAACCGATAACAGGTTCACCAGAAacc
acctccaccaccacccTTGTTATCACCACTGAAAATCAACCAAGAACAAC
GAGAAATATAAGAATAAAGAAGACGACAAAACCAACAACCACCGAAGCCA
CTACCGTTACAACAGAATCAAAGTCTAGAAGTTCTTCTGGAGCACCAGTT
ACAACAACAGCTCCACCAACAACAAGCATTAAAACAACCAAGGAGGTTCC
TAatccaacaaaatcaaaatcaacagATGAGCAAACACCTTCAATTACAG
TTTCAACTACCACAGATTCATCATCGCAAACAACCGAATCTCCCAAAAAG
GTAACAAAAGCTCCTAAGAAAGTGACGACGACACCGAAGACAACTAAAAC
AGTAAAGAAGACAACAGAAGAAGACGCAACAGAGTCCACGACTTCATCAA
TAACACCAGAAAGCACTGGTAAACCATCATCAAAGACCGCTTCAACGTCC
CGACAAGAAACCCCTACAACACGTACAACACCTTCTACAAGTACAAAAGA
AGAAACAACGATCCAACCTACCAAGACAAATATCATGATGAAGATCGTAC
TCGTGTTAACTTTGGTTGTTGCTCTCTGGTTTGGACTTTCTGAAGGATCC
GAAATTAGATGTCCGTGTCTATCATGTTTAAACAACAACGCCAACTGCGC
ACCCTTACGGCGCCCTTTTACCAAAGTACCAGGACAATTTCCCAAGGAAA
TCAGAAGCATTCACATGCAAAACAACAAGATTACAAGAATCACTGCAAAA
AGTTTTGGTCATTTACCAAAGTTGACTTTATTACGACTTGATCAGAATCA
GATTGATGAAGTCTGGCCTGGAGCATTTGGAGGAATGCCAAAattgaatg
atttgaatctaCAGAATAATAAAATTATGGTGTTACCAGACGACTTTGTA
CACGCTGACGCCCCTTTGGCTAAAGGAATCAAATTGAACAACAATGGACT
GACAACCTTTCCCTTGAGTATACTCAAGAAAACTCGCACTTATATCAACG
TCAACGGTAATCCAATAAATTGTGATTGTTTCTCAATAATACCTAAAGAT
CTCAAGAATAAAGCGATTGGTACTTGCGCCTCACCTCCTAGCGTGAAAGA
TCGTCGCATCTCCTTGATCACCTACAAAGATGTGAACTGTTCGTCTTGTG
ATGGATTTAACTGTAACCACGGCAACTGTTATTCCTACACAACTCCACGT
GGCCTTGAAAAGCGACAATGTATCTGTGACATTGGATACAAAGGAGAACG
TTGCAACATCAAATATGACCCCGTTCTTCCCACTGAAACACCAGATTTAA
CGACTGCTCCTACGGCACCAGGGACATCCACAGTTTCTTCAACAACGCCT
TCACAACCAAACGAATCTACTCCACAACCCAAAACAATCTCCAATACAAA
GTCTCCAAGGGAAACTACAGAATCACCACAAACCAAGACACCAGAAAAAA
CGAAACCAACTTTTACCAAGCCTACAACAGatacaaaatcaactcaaaag
aTAGCACCATCAACAAATACTGATCCTGCAGTTGTTAGCACATCTCAGAC
ACCGGCCGAACCGATAACAGGTTCACCAGAAaccacctccaccaccaccc
TTGTTATCACCACTGAAAATCAACCAAGAACAACGAGAAATATAAGAATA
AAGAAGACGACAAAACCAACAACCACCGAAGCCACTACCGTTACAACAGA
ATCAAAGTCTAGAAGTTCTTCTGGAGCACCAGTTACAACAACAGCTCCAC
CAACAACAAGCATTAAAACAACCAAGGAGGTTCCTAatccaacaaaatca
aaatcaacagATGAGCAAACACCTTCAATTACAGTTTCAACTACCACAGA
TTCATCATCGCAAACAACCGAATCTCCCAAAAAGGTAACAAAAGCTCCTA
AGAAAGTGACGACGACACCGAAGACAACTAAAACAGTAAAGAAGACAACA
GAAGAAGACGCAACAGAGTCCACGACTTCATCAATAACACCAGAAAGCAC
TGGTAAACCATCATCAAAGACCGCTTCAACGTCCCGACAAGAAACCCCTA
CAACACGTACAACACCTTCTACAAGTACAAAAGAAGAAACAACGATCCAA
CCTACCAAGACAAATATCGTGACAATAACCAAGACGTTACAAAGATGtca
gaaacttttgaaaaatgcaatcAATCGACCAGTCCGTATGTTTCTCCATC
CAAGCGAAGATTATGAAAAAGTGGAAAACGCTGTCCAAAAATTCAGCGCT
CTGAGTGACCTGAAGAATCCTGAAAAACAGTCACAGGTGACAATAACCAA
GACGTTACAAAGATGtcagaaacttttgaaaaatgcaatcAATCGACCAG
TCCGTATGTTTCTCCATCCAAGCGAAGATTATGAAAAAGTGGAAAACGCT
GTCCAAAAATTCAGCGCTCTGAGTGACCTGAAGAATCCTGAAAAACAGTC
ACAGtacGATCCTATTCAGCTCTGTGTGATCAACCTTCTTGTTCAGTTGG
TCAAAGAAGAAGATTAAtacGATCCTATTCAGCTCTGTGTGATCAACCTT
CTTGTTCAGTTGGTCAAAGAAGAAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240_pilon | genome | sc0000240_pilon:192877..196179 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1753-1815:3241 |
| Aaloc | 1585-1752:1851 |
| Aaloc | 1-1584:1 |
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