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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000240_pilon:2803..5110- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014213 ID=XLOC_014213|Name=XLOC_014213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2308bp|location=Sequence derived from alignment at sc0000240_pilon:2803..5110- (Clytia hemisphaerica_ch_hm2_pilon)
ACGTACATTAGAAAGGGTCAAGTCGACTTTCAAGACGGTGATGACAGTGG
TGAGCACAAGACACACGGTGAAGAGGCTAATAGTAGATTAGCTGGATTGT
TTGAACATTCAAAATGGGATATGAATGACACACATAGAAAGAAAGAACTT
CCACCTCTGAAAGACACTGTTTCTATATTACGGAAGAAGAATTCTAAAAA
GCAAAAGGAGCTTGCCGAAAAATGGCATGAAAAAACAACGCCAGCCAAAG
TGAAAAAAGAATTGGGTTTTGATTCTAGTGATTCAAGGACTAATTTAGTA
GAAATTGAGGAGTCACCAAGACGAAATAATAACAAACTACAACAGAGGGA
GAGCGTTGGTGATAATTATTCTTTTGTCAATCCTGGTTTTGATAACAACC
TAAAATACAAAAATGACAATATATATGAAAAGGAAAGCAACAACAATAAA
ATAGACTTGGAAAGTAATAGTGAGAACATCGCAAGGACTAATTCTTTAAC
TCACAAGGAAAATTTGTTTAAAGTCGTCAATAGAGATACTACATTGGATC
TAGAAGATGATATTAACAATAATGATGACGATGGAGAAGAATCAAAGACT
GATTATCGTAAACTAGCATTAGAACTTGCAACAAACTCTTCAAAATCTAA
GAAAAATATAGAGAGGTACTCTTTACCCGACTTTGTTTTGACATATAATA
TACATGATTCAGACACACTCCATAAAAAAGAAAGAGAAACTTTTGAAGCC
AAGATGCGAGATGAAGATATTAAAATTGCTTATGATATTATCGGCGAAAA
TATGTATGTTCAACTATATCCGACCTTTGAAAGATTATGTCAAGAAGCAG
AAACTGTTGCACTTGAAATGCCACTGGAAGGGGTAATTCTTGTTCCTTTA
GATAATTTGTCTAAAATATCTCTGAAGAAATGCTTGAAATTTTGGATTAC
GACTATGTTTTTTAATAAAACGAAAAGTTTATGCTGAAAAATATTTGTTG
AAATGTTTTTTGAATCATAACTTAAATTTATGATTGAAAAAAAACAAAGG
TATCATAAAAGAACAACTCAAACCTATGTTAATGTTATACAGCATCAAAT
TTCTCTTCAATAATGATTTTTATCGAATTAGTTTTTAGTACAACCAGCAT
TTGATGATAATTTGGTGACTTCACTAAACAAATCACTGAAAACTGATGAC
GAAGGTAATAAATATTATTTCGTTAGTTTTCTACCAAACCATCATCATTG
GACTAATCAAATACTTTGTTCAAGGTTTTAACCTGTGGTAAACTGGTCTT
TCCTAAAAGAATACTTGGGATGAGGGTTCACAATATGGACAAGTTCAATA
AAATGGATAGTTTATATATCGTTTTGAAAATTTCTATATTCTAGTGGATA
TGATTAGTGCACCATTTTGTTTGGCAACTAAAAAGTTGTTCCATGGCATC
GAAGACGAGAACACTTTCTTCAGATCAAGTCACCGATCCATGCTGGTACA
GTTTCTTTTTTATTTTTGATTCCTTTCCTTTTCAATTTTCCCTATTGCAT
TTTATAAGTTTAGTTTTAAAACCCTCAATTTCTTTCTAGACACGAAATAT
TTTGGAGAACTTGATCATATCTCTAGGAAAAGAAGATGAAGAAAGCATTA
ACATTCGTAAAAGAAAAGGTCAGTGCAAGTACTATAATAGTTTAACTTTT
ATTGGCTTTTAGTTAATAAACTGAAGCAAAAAAAATTATCTTTTCATATC
TGCTTCCTTCTTGGTAAATGGACAGTTTTGTAATAAGTAAAAGAAAATAC
GTCATAATTTATTGTGATGCCCTTTAAAGTTAGGTATACAAATTATACTT
TGCAATTATTCAATTATATACTAGATGCCTATTTAATCTTTTTAAAACAA
GAATTTTATCAATATTTCATAGAACATTTACTTTAAATCATTCTCAGAAA
TGGGAAGTTTTGAGCTGACTTTTTCTATAATATATGATATTTCTGATAAC
CCTTATTTCCTTTAATAGGATTGACATCACTATTGGTGTCTGGTTCATAC
AAAGATGGCTTTGTGTTGAATGATCGATCAGCTTTGGATAATGTTTATCC
ATTAAAGTATACCGTTGAAGATGCACTGAAATTTTTACCACCAGATACTC
GCAGGGAACTCAAGAATACCTGGTTAAAATGTTTAAAGTTCCAACCTTTG
TGGAAAATCCGAAATTATTATGGAGAGAAGATCGGGCTCTATTTTGCTTG
GCTAGGTAAACTAAATATTTTGTTTAATTATGTTACAATCGTGGTCGAAA
TCTATTGA Coding sequence (CDS) from alignment at sc0000240_pilon:2803..5110- >XLOC_014213 ID=XLOC_014213|Name=XLOC_014213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2850bp|location=Sequence derived from alignment at sc0000240_pilon:2803..5110- (Clytia hemisphaerica_ch_hm2_pilon)
ACGTACATTAGAAAGGGTCAAGTCGACTTTCAAGACGGTGATGACAGTGG
TGAGCACAAGACACACGGTGAAGAGGCTAATAGTAGATTAGCTGGATTGT
TTGAACATTCAAAATGGGATATGAATGACACACATAGAAAGAAAGAACTT
CCACCTCTGAAAGACACTGTTTCTATATTACGGAAGAAGAATTCTAAAAA
GCAAAAGGAGCTTGCCGAAAAATGGCATGAAAAAACAACGCCAGCCAAAG
TGAAAAAAGAATTGGGTTTTGATTCTAGTGATTCAAGGACTAATTTAGTA
GAAATTGAGGAGTCACCAAGACGAAATAATAACAAACTACAACAGAGGGA
GAGCGTTGGTGATAATTATTCTTTTGTCAATCCTGGTTTTGATAACAACC
TAAAATACAAAAATGACAATATATATGAAAAGGAAAGCAACAACAATAAA
ATAGACTTGGAAAGTAATAGTGAGAACATCGCAAGGACTAATTCTTTAAC
TCACAAGGAAAATTTGTTTAAAGTCGTCAATAGAGATACTACATTGGATC
TAGAAGATGATATTAACAATAATGATGACGATGGAGAAGAATCAAAGACT
GATTATCGTAAACTAGCATTAGAACTTGCAACAAACTCTTCAAAATCTAA
GAAAAATATAGAGAGGTACTCTTTACCCGACTTTGTTTTGACATATAATA
TACATGATTCAGACACACTCCATAAAAAAGAAAGAGAAACTTTTGAAGCC
AAGATGCGAGATGAAGATATTAAAATTGCTTATGATATTATCGGCGAAAA
TATGTATGTTCAACTATATCCGACCTTTGAAAGATTATGTCAAGAAGCAG
AAACTGTTGCACTTGAAATGCCACTGGAAGGGACGTACATTAGAAAGGGT
CAAGTCGACTTTCAAGACGGTGATGACAGTGGTGAGCACAAGACACACGG
TGAAGAGGCTAATAGTAGATTAGCTGGATTGTTTGAACATTCAAAATGGG
ATATGAATGACACACATAGAAAGAAAGAACTTCCACCTCTGAAAGACACT
GTTTCTATATTACGGAAGAAGAATTCTAAAAAGCAAAAGGAGCTTGCCGA
AAAATGGCATGAAAAAACAACGCCAGCCAAAGTGAAAAAAGAATTGGGTT
TTGATTCTAGTGATTCAAGGACTAATTTAGTAGAAATTGAGGAGTCACCA
AGACGAAATAATAACAAACTACAACAGAGGGAGAGCGTTGGTGATAATTA
TTCTTTTGTCAATCCTGGTTTTGATAACAACCTAAAATACAAAAATGACA
ATATATATGAAAAGGAAAGCAACAACAATAAAATAGACTTGGAAAGTAAT
AGTGAGAACATCGCAAGGACTAATTCTTTAACTCACAAGGAAAATTTGTT
TAAAGTCGTCAATAGAGATACTACATTGGATCTAGAAGATGATATTAACA
ATAATGATGACGATGGAGAAGAATCAAAGACTGATTATCGTAAACTAGCA
TTAGAACTTGCAACAAACTCTTCAAAATCTAAGAAAAATATAGAGAGGTA
CTCTTTACCCGACTTTGTTTTGACATATAATATACATGATTCAGACACAC
TCCATAAAAAAGAAAGAGAAACTTTTGAAGCCAAGATGCGAGATGAAGAT
ATTAAAATTGCTTATGATATTATCGGCGAAAATATGTATGTTCAACTATA
TCCGACCTTTGAAAGATTATGTCAAGAAGCAGAAACTGTTGCACTTGAAA
TGCCACTGGAAGGGTTTTTAGTACAACCAGCATTTGATGATAATTTGGTG
ACTTCACTAAACAAATCACTGAAAACTGATGACGAAGTTTTTAGTACAAC
CAGCATTTGATGATAATTTGGTGACTTCACTAAACAAATCACTGAAAACT
GATGACGAAGTGGATATGATTAGTGCACCATTTTGTTTGGCAACTAAAAA
GTTGTTCCATGGCATCGAAGACGAGAACACTTTCTTCAGATCAAGTCACC
GATCCATGCTGTGGATATGATTAGTGCACCATTTTGTTTGGCAACTAAAA
AGTTGTTCCATGGCATCGAAGACGAGAACACTTTCTTCAGATCAAGTCAC
CGATCCATGCTGACACGAAATATTTTGGAGAACTTGATCATATCTCTAGG
AAAAGAAGATGAAGAAAGCATTAACATTCGTAAAAGAAAAGACACGAAAT
ATTTTGGAGAACTTGATCATATCTCTAGGAAAAGAAGATGAAGAAAGCAT
TAACATTCGTAAAAGAAAAGGATTGACATCACTATTGGTGTCTGGTTCAT
ACAAAGATGGCTTTGTGTTGAATGATCGATCAGCTTTGGATAATGTTTAT
CCATTAAAGTATACCGTTGAAGATGCACTGAAATTTTTACCACCAGATAC
TCGCAGGGAACTCAAGAATACCTGGTTAAAATGTTTAAAGTTCCAACCTT
TGTGGAAAATCCGAAATTATTATGGAGAGAAGATCGGGCTCTATTTTGCT
TGGCTAGGTAAACTAAATATTTTGTTTAATTATGTTACAATCGTGGTCGA
AATCTATTGAGATTGACATCACTATTGGTGTCTGGTTCATACAAAGATGG
CTTTGTGTTGAATGATCGATCAGCTTTGGATAATGTTTATCCATTAAAGT
ATACCGTTGAAGATGCACTGAAATTTTTACCACCAGATACTCGCAGGGAA
CTCAAGAATACCTGGTTAAAATGTTTAAAGTTCCAACCTTTGTGGAAAAT
CCGAAATTATTATGGAGAGAAGATCGGGCTCTATTTTGCTTGGCTAGGTA
AACTAAATATTTTGTTTAATTATGTTACAATCGTGGTCGAAATCTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240_pilon | genome | sc0000240_pilon:2803..5110 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1144-1431:289 |
| Aaloc | 1063-1140:720 |
| Aaloc | 964-1062:913 |
| Aaloc | 889-960:1178 |
| Aaloc | 7-888:2309 |
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