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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000240_pilon:198883..202493- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014206 ID=XLOC_014206|Name=XLOC_014206|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3611bp|location=Sequence derived from alignment at sc0000240_pilon:198883..202493- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATAAAGAAGAACTTTTGGGAATCGAAGATGTTGATCTAGATGA
TGATCTTGAAGATGACTCTGAAGTGGAATTTGAATTCCCACTCAAAAATG
TTGTTGGTGGTGAAAGCAGAAGTTCTAATCAAGAAGACCAGAACAATGTG
ACCATTGATGAATACCTTATCAAGACTGGAGAATGTGGAAAATATCAAAT
CATTATGGTCTTCCTGATGGGATTTGCTATGATCCCAATGTCGTTCCCAC
CTCTCATATTTTATTATATCGGTTATGATCCACCGTGGAGCTGTACTGCT
AACGTGTCACATCCAAATGGAACTTTCTGCACCACACATAACGCCTCACA
ATTATTCAAACATACAGAAAATGATAGATGCTCTTTGAATCAAGGAGAAT
GGCACTACATGAATCATGGAAGATCCAGTGTAGTTACTGAGGTAATGGTT
ACTTAAATAAAACTACTTCAGTAAAATTTTTGTCCATGACGTGTGTAGTC
TTTTAAAAGTAAATTGACTTTGATATCTTCAAACAAAAGTCAACCTTTTT
TATAGTAGAAATGCCTCTTTAAAAATAGACAAGTGTAAGGCTTTTGATTT
CTACCGTCTGTACTCTCTAACGCTATTCTTATTTTGTGCTATATTAGTCT
TATATGAATTCAAGAATAATTCTTTTTCATTTCAGTTTAATCTTGTCTGT
AAAGATGCATGGTTAGATGCGTTGACAGGATCTATTGTATTCGTTGGTTG
GGGAATTGGAATATTGACTTTGGGTTATCTCTCTGATCAGTATGGTCGAA
AGAAGATTCTTTACCCTGCTATGTTGTTGACTCTGTTAGCTTTGATGGCT
CATGCATTTGTTACCAGCATATGGCAACTTCTTGTCGTGCGTTTTATCAT
GGGTTTTGTTTATTCTGGCCCTGCATTAAATCATTATATTCTATCGACTG
AAATAGTTGGTCCGAATAGAAGAGCATTAGCATCGACACTATCAAGTTGT
GCATGGCCCATTGGTGCATTTCTAATGACCATAAAAGCATATTATTTAAA
CAATTGGAGACACCTGGCATTGTTCAGTTCAGTACCATACATGTTTGGAC
TCATAACGTGCATGTAAGTCAGCCCAACTATTTTTATATTTTCAAAATTT
GATTAACCCTCTTGATACCGACAAACAAAACTATTACCCAAAAAATTATT
TCGATTTTTCAGAAAGTGATATTAAATGGTGTTTTAAATTACGAAAAATT
TTAAAAACACTAATTTTTTTTGTTCGATATTTCATAGTTTTTATTGCAGA
ATTGAAACTGATTGTTTTTAAAAATGATTGTTTTTGTAATCTTTTCAGAT
GTGTTCCAGAATCCTTTCGCTGGCTCCATGTGAAAGGCCGCACTGCAGAG
GCGGAGAAAATCTTACAAAAAGCCTCAAAATGTAATAATACCAATTTTAT
AAATGATTTATCATTAGAGAAGTATCAAAACTCATCACAGGAAAAAGCGA
AGAAGGTTTCGTATCTTGTACTCTTCAAAAGTTGTAAATTGTTCGTTATG
ATGATTTCACAAGCTTTCATATGGTAAGAGTTAAAATAAAAGGTCTTTTT
GGCCAATTTTTTGCCATTTTAGCTTTACTTCATAGATTTTTAGATTATTT
GCCTCGATAATATCTTTCCAACGGTGAGTAAATCACGGTTGCTGAGAATT
TGTTAATGATTATATACCCTTGTCTCTAGTAGTGAATGGGATTCGATCAA
CCAAATCCCAAGTTCTTATTCTTGCTGTCCTCCCTCTAAAGTGTCTAATC
ATGCCAGTGTAACTGAAGTACAGTTGGGTACAGCTCAATCTCTCATCAAA
CTGCAATATTTTTTTAAAGATGCTTCAAGATGCAACCCATGTCTAAAGTA
CATTTTAGGAAATCCTATCCTTTTCACAGCTCTTGCTGTTGGCAAAACTT
GAATCAAAATTCGATACCTTCTTCCTCAGGTTTAATAGTGGTATGGTTTA
TTACGCGTTATCTTGGGCTTTCTCGGACCTTGGTGGAAATATGTATTTGA
ATTTCGTTTGGTCGACATTGATAGAACTTCCAGGAGCTCTGATCTCTTAT
TTCTTACTCAATTTGTAAGTTCATTCAAATTTGATTATTCAGATTGTTTT
ATGTACATAAAGCTGAATACTAAAGGTACATCCGAAATAGAGAATTCGAA
GTGTCTGTCCCTTAAAGAGGGAGGTTAGAACATTCTATATTACGAGAGAT
AAAGCTATACTTCAATAACTCTTTGGGCCAGCTCTGTTCCATTCAAGGCT
AGCTGTTGCAGGAATGAGATTCGTAGCAATTTAGTTACACAATCTTAAAT
GTTTTTCTTACACCAATTCTGTTCTTCTTTTAGCATTGGGAGGAAGAAAA
CTTGTATTATCATTTACCTATTGACTGGTTTATTTTGCTTAGTTGTAACT
TGCATTCCTGAATCAGAAAAAGGTTCGTATATTTTCTTCATAATTTTTTC
ACTTTAGCTTGGCACAGTCAGCTGACTGAAGGCTACACAAATTTGGCTAA
AAATTAAAAGGTTTCACTCGGTCAAATCATGTATTTCATTTCAGTGGCGA
GGCTTGTATTTGGATTACTTGGCAAACTAATGGCATCAGCGGGTTTCATG
TCCATCTATATGTGGTCGTCAGAAATATATCCAACCTGTCTCAGGTACTT
CTTCGCTATTATTATTATCGCTGCGTCATTGCTTCTTTATTAACGTTTGA
CTTTGGCGTTATTGATAAAGTCATTTTTTTATTAGTCATTATGATACAAA
AAAGTCTCCATTACTAAGTAAAGACCGATGCCAAACATTTATCTTTAAAG
TTATCGAGAGTCAAAGTGATAACAATAATTTAAGATTCTTTCTGAGTGAG
TTTATTGTTTCCCCTTTTTCTCCTCCAGAACACAAGGTATGGGTATCAAC
ATCGTGACTAGCCGCGCGGGCGCCGCTACTTCACCTTTTATCAAACTACT
CAACCGCATCCACCCTGCGGCTCCATTCGGCCTGATGACCACCACTTGCT
TCATTTCAATGCTTCTGGCGTTCGTTTTACCTGAAACCTTCAGAAAACCA
ACCAGAGAAACTTTAGATGATATTTACCAAGGTTTGTTTTTGCGAGATTA
TGTTTTGTTTTTCAGGATCATAGCTTCTTTAAAGTTTTCCTAATTATATT
GGAAATTTCAGGATTTTTTAACTGGGAGACTTCTCAGTTTAATTTCTCAA
GTAGGGAAGACTTCTGGTGGATCTGTGATGCAGTGTTGTCTCGGATCAAT
GAAATCGATAATGTCAAAATACATAGTGTATTTGGGCGAAAATCATGATA
AAATTTAATTCTTGACTTTTTTACAAATGTTTAAAAAATAATGAGATATT
CCCATCCGATATTCAAAAAATTACGTTTTTCTCCATTATTTCCTTTGCAG
ACAATAAAACGTACACACACAAGATTCACTTTGCATCTTTCACGCAAGAA
GACGGCGGAGGAGATGAAGGAATGGTCAGAATTGATGGCAATGAAAATGA
TGAAGACATTGAAGATACCGAACATCTTCTGGCATCTCCCGGTGATTATG
CTATTGCTTGA Coding sequence (CDS) from alignment at sc0000240_pilon:198883..202493- >XLOC_014206 ID=XLOC_014206|Name=XLOC_014206|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3564bp|location=Sequence derived from alignment at sc0000240_pilon:198883..202493- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATAAAGAAGAACTTTTGGGAATCGAAGATGTTGATCTAGATGA
TGATCTTGAAGATGACTCTGAAGTGGAATTTGAATTCCCACTCAAAAATG
TTGTTGGTGGTGAAAGCAGAAGTTCTAATCAAGAAGACCAGAACAATGTG
ACCATTGATGAATACCTTATCAAGACTGGAGAATGTGGAAAATATCAAAT
CATTATGGTCTTCCTGATGGGATTTGCTATGATCCCAATGTCGTTCCCAC
CTCTCATATTTTATTATATCGGTTATGATCCACCGTGGAGCTGTACTGCT
AACGTGTCACATCCAAATGGAACTTTCTGCACCACACATAACGCCTCACA
ATTATTCAAACATACAGAAAATGATAGATGCTCTTTGAATCAAGGAGAAT
GGCACTACATGAATCATGGAAGATCCAGTGTAGTTACTGAGATGAGTGAT
AAAGAAGAACTTTTGGGAATCGAAGATGTTGATCTAGATGATGATCTTGA
AGATGACTCTGAAGTGGAATTTGAATTCCCACTCAAAAATGTTGTTGGTG
GTGAAAGCAGAAGTTCTAATCAAGAAGACCAGAACAATGTGACCATTGAT
GAATACCTTATCAAGACTGGAGAATGTGGAAAATATCAAATCATTATGGT
CTTCCTGATGGGATTTGCTATGATCCCAATGTCGTTCCCACCTCTCATAT
TTTATTATATCGGTTATGATCCACCGTGGAGCTGTACTGCTAACGTGTCA
CATCCAAATGGAACTTTCTGCACCACACATAACGCCTCACAATTATTCAA
ACATACAGAAAATGATAGATGCTCTTTGAATCAAGGAGAATGGCACTACA
TGAATCATGGAAGATCCAGTGTAGTTACTGAGTTTAATCTTGTCTGTAAA
GATGCATGGTTAGATGCGTTGACAGGATCTATTGTATTCGTTGGTTGGGG
AATTGGAATATTGACTTTGGGTTATCTCTCTGATCAGTATGGTCGAAAGA
AGATTCTTTACCCTGCTATGTTGTTGACTCTGTTAGCTTTGATGGCTCAT
GCATTTGTTACCAGCATATGGCAACTTCTTGTCGTGCGTTTTATCATGGG
TTTTGTTTATTCTGGCCCTGCATTAAATCATTATATTCTATCGACTGAAA
TAGTTGGTCCGAATAGAAGAGCATTAGCATCGACACTATCAAGTTGTGCA
TGGCCCATTGGTGCATTTCTAATGACCATAAAAGCATATTATTTAAACAA
TTGGAGACACCTGGCATTGTTCAGTTCAGTACCATACATGTTTGGACTCA
TAACGTGCATTTTAATCTTGTCTGTAAAGATGCATGGTTAGATGCGTTGA
CAGGATCTATTGTATTCGTTGGTTGGGGAATTGGAATATTGACTTTGGGT
TATCTCTCTGATCAGTATGGTCGAAAGAAGATTCTTTACCCTGCTATGTT
GTTGACTCTGTTAGCTTTGATGGCTCATGCATTTGTTACCAGCATATGGC
AACTTCTTGTCGTGCGTTTTATCATGGGTTTTGTTTATTCTGGCCCTGCA
TTAAATCATTATATTCTATCGACTGAAATAGTTGGTCCGAATAGAAGAGC
ATTAGCATCGACACTATCAAGTTGTGCATGGCCCATTGGTGCATTTCTAA
TGACCATAAAAGCATATTATTTAAACAATTGGAGACACCTGGCATTGTTC
AGTTCAGTACCATACATGTTTGGACTCATAACGTGCATATGTGTTCCAGA
ATCCTTTCGCTGGCTCCATGTGAAAGGCCGCACTGCAGAGGCGGAGAAAA
TCTTACAAAAAGCCTCAAAATGTAATAATACCAATTTTATAAATGATTTA
TCATTAGAGAAGTATCAAAACTCATCACAGGAAAAAGCGAAGAAGGTTTC
GTATCTTGTACTCTTCAAAAGTTGTAAATTGTTCGTTATGATGATTTCAC
AAGCTTTCATATGATGTGTTCCAGAATCCTTTCGCTGGCTCCATGTGAAA
GGCCGCACTGCAGAGGCGGAGAAAATCTTACAAAAAGCCTCAAAATGTAA
TAATACCAATTTTATAAATGATTTATCATTAGAGAAGTATCAAAACTCAT
CACAGGAAAAAGCGAAGAAGGTTTCGTATCTTGTACTCTTCAAAAGTTGT
AAATTGTTCGTTATGATGATTTCACAAGCTTTCATATGGTTTAATAGTGG
TATGGTTTATTACGCGTTATCTTGGGCTTTCTCGGACCTTGGTGGAAATA
TGTATTTGAATTTCGTTTGGTCGACATTGATAGAACTTCCAGGAGCTCTG
ATCTCTTATTTCTTACTCAATTTGTTTAATAGTGGTATGGTTTATTACGC
GTTATCTTGGGCTTTCTCGGACCTTGGTGGAAATATGTATTTGAATTTCG
TTTGGTCGACATTGATAGAACTTCCAGGAGCTCTGATCTCTTATTTCTTA
CTCAATTTCATTGGGAGGAAGAAAACTTGTATTATCATTTACCTATTGAC
TGGTTTATTTTGCTTAGTTGTAACTTGCATTCCTGAATCAGAAAAAGCAT
TGGGAGGAAGAAAACTTGTATTATCATTTACCTATTGACTGGTTTATTTT
GCTTAGTTGTAACTTGCATTCCTGAATCAGAAAAAGTGGCGAGGCTTGTA
TTTGGATTACTTGGCAAACTAATGGCATCAGCGGGTTTCATGTCCATCTA
TATGTGGTCGTCAGAAATATATCCAACCTGTCTCAGTGGCGAGGCTTGTA
TTTGGATTACTTGGCAAACTAATGGCATCAGCGGGTTTCATGTCCATCTA
TATGTGGTCGTCAGAAATATATCCAACCTGTCTCAGAACACAAGGTATGG
GTATCAACATCGTGACTAGCCGCGCGGGCGCCGCTACTTCACCTTTTATC
AAACTACTCAACCGCATCCACCCTGCGGCTCCATTCGGCCTGATGACCAC
CACTTGCTTCATTTCAATGCTTCTGGCGTTCGTTTTACCTGAAACCTTCA
GAAAACCAACCAGAGAAACTTTAGATGATATTTACCAAGAACACAAGGTA
TGGGTATCAACATCGTGACTAGCCGCGCGGGCGCCGCTACTTCACCTTTT
ATCAAACTACTCAACCGCATCCACCCTGCGGCTCCATTCGGCCTGATGAC
CACCACTTGCTTCATTTCAATGCTTCTGGCGTTCGTTTTACCTGAAACCT
TCAGAAAACCAACCAGAGAAACTTTAGATGATATTTACCAAGACAATAAA
ACGTACACACACAAGATTCACTTTGCATCTTTCACGCAAGAAGACGGCGG
AGGAGATGAAGGAATGGTCAGAATTGATGGCAATGAAAATGATGAAGACA
TTGAAGATACCGAACATCTTCTGGCATCTCCCGGTGATTATGCTATTGCT
TGAACAATAAAACGTACACACACAAGATTCACTTTGCATCTTTCACGCAA
GAAGACGGCGGAGGAGATGAAGGAATGGTCAGAATTGATGGCAATGAAAA
TGATGAAGACATTGAAGATACCGAACATCTTCTGGCATCTCCCGGTGATT
ATGCTATTGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240_pilon | genome | sc0000240_pilon:198883..202493 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1624-1782:160 |
| Aaloc | 1420-1620:683 |
| Aaloc | 1321-1416:1016 |
| Aaloc | 1231-1317:1228 |
| Aaloc | 1096-1227:1632 |
| Aaloc | 871-1092:2263 |
| Aaloc | 442-867:2927 |
| Aaloc | 1-441:3612 |
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