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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:557740..559065+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014145 ID=XLOC_014145|Name=XLOC_014145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1326bp|location=Sequence derived from alignment at sc0000142_pilon:557740..559065+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtattttttcTCAGAAGATGGAAGAATAAAACCAAGACCACCCGGCAA
AACACAAACACACCACCCACAACTTTACTGACCATCAACCTgaagaaaag
tattttttatacAACAGTACCATCACACGACGTTcttcaatgaaaaataa
tagagAAAATAGAGTCATGCGTACAAGCTACATTAAAGTGATATTCGCTT
TCTTGTTTCCTTTTCTCATCATTTTCACCGTCTTACAGCACATCGGTCCT
TTCAAATTCTCTTCTTACAAAGAAATCACGTACGATGAGAAGAATCGTGA
AATCGATGCATGGAGTCTTGAACGAGGTGACGTCATCGATCGGTTGGACA
CCATCTCGGAGAATATACACAAAGATCGAACTGAGTTTAATAAGACACTA
AAATTAATACATTCGAAATTAACAGATTTAatgaaatcagagaaaaatag
tGTTCTTCAAAATGTTGCACCTAGAGTTGACGGGAAGAAAAAGACACGAG
TACGTTGCCCGAAAACGTATAAAAATCCTAGCGGTTACGTTATCAAAGAC
TCCGTTAGGGCGCCGTGCATCCACACGCTTATCTCCTTGTTATTTTAATT
TCAACTCACGTATCACATTACGATCGACGTGGCACGATACGGGAGACGTG
GGCCGATGCTTCACGTTGGAACATACGAGGTGATTTACCGTGGACAGGTA
GTTTTCAACGTAGGATACGTGAACAAAACGCATAAAATATCTCACAAGTT
ACGTGAAGAGATGAAACATCACGGTGATCTGATTGTTGGTGACgtcaaag
aaagtttttatacgctgtcaaaaaaattatcgattGGAATCGATTGGCTA
CATCGAAATCTGGTCTTCGATTTTGTTCTAAAAACGGACGATGACGTTTT
TATAAACATTCCTAAGGTTTTGAAAGCGTTAAATACGTTACCCAGTCACA
TTCAATATTTCGGCCACGTAATGTGGCGTCAACCTGTTGAACGCAAGGGG
CGTTATAAACTCACGCCCGATGAATTCAAACACGACCGATTCGACCCGTA
CTGTTCTGGGGGTGGATTCATAGTCAGACAGGGCGTTATCGAGAAAATTG
CTTGGTACCTTGTCTTTAATAGACCTTTGAAATACGAGGACGCCTATTTC
GGATCGTTGGCGTTTAAAGCGGGCGTTGTACCATCCAAGGCgtatgataa
atattttttgatgaggAACCATAAATGCATCTATCACGGAAGAGATGTTT
CTATCGCACAGGAGTGGACCCTCGGTGTATGAAGTCTTTAATGATCAGAT
CAAGCACTCAAATAGatcacttttga Coding sequence (CDS) from alignment at sc0000142_pilon:557740..559065+ >XLOC_014145 ID=XLOC_014145|Name=XLOC_014145|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2652bp|location=Sequence derived from alignment at sc0000142_pilon:557740..559065+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtattttttcTCAGAAGATGGAAGAATAAAACCAAGACCACCCGGCAA
AACACAAACACACCACCCACAACTTTACTGACCATCAACCTgaagaaaag
tattttttatacAACAGTACCATCACACGACGTTcttcaatgaaaaataa
tagagAAAATAGAGTCATGCGTACAAGCTACATTAAAGTGATATTCGCTT
TCTTGTTTCCTTTTCTCATCATTTTCACCGTCTTACAGCACATCGGTCCT
TTCAAATTCTCTTCTTACAAAGAAATCACGTACGATGAGAAGAATCGTGA
AATCGATGCATGGAGTCTTGAACGAGGTGACGTCATCGATCGGTTGGACA
CCATCTCGGAGAATATACACAAAGATCGAACTGAGTTTAATAAGACACTA
AAATTAATACATTCGAAATTAACAGATTTAatgaaatcagagaaaaatag
tGTTCTTCAAAATGTTGCACCTAGAGTTGACGGGAAGAAAAAGACACGAG
TACGTTGCCCGAAAACGTATAAAAATCCTAGCGGTTACGTTATCAAAGAC
TCCGTTAGGGCGCCGTGCATCCACACGCTTATCTCCTTGTTATTTTAATT
TCAACTCACGTATCACATTACGATCGACGTGGCACGATACGGGAGACGTG
GGCCGATGCTTCACGTTGGAACATACGAGGTGATTTACCGTGGACAGGTA
GTTTTCAACGTAGGATACGTGAACAAAACGCATAAAATATCTCACAAGTT
ACGTGAAGAGATGAAACATCACGGTGATCTGATTGTTGGTGACgtcaaag
aaagtttttatacgctgtcaaaaaaattatcgattGGAATCGATTGGCTA
CATCGAAATCTGGTCTTCGATTTTGTTCTAAAAACGGACGATGACGTTTT
TATAAACATTCCTAAGGTTTTGAAAGCGTTAAATACGTTACCCAGTCACA
TTCAATATTTCGGCCACGTAATGTGGCGTCAACCTGTTGAACGCAAGGGG
CGTTATAAACTCACGCCCGATGAATTCAAACACGACCGATTCGACCCGTA
CTGTTCTGGGGGTGGATTCATAGTCAGACAGGGCGTTATCGAGAAAATTG
CTTGGTACCTTGTCTTTAATAGACCTTTGAAATACGAGGACGCCTATTTC
GGATCGTTGGCGTTTAAAGCGGGCGTTGTACCATCCAAGGCgtatgataa
atattttttgatgaggAACCATAAATGCATCTATCACGGAAGAGATGTTT
CTATCGCACAGGAGTGGACCCTCGGTGTATGAAGTCTTTAATGATCAGAT
CAAGCACTCAAATAGatcacttttgaatgtattttttcTCAGAAGATGGA
AGAATAAAACCAAGACCACCCGGCAAAACACAAACACACCACCCACAACT
TTACTGACCATCAACCTgaagaaaagtattttttatacAACAGTACCATC
ACACGACGTTcttcaatgaaaaataatagagAAAATAGAGTCATGCGTAC
AAGCTACATTAAAGTGATATTCGCTTTCTTGTTTCCTTTTCTCATCATTT
TCACCGTCTTACAGCACATCGGTCCTTTCAAATTCTCTTCTTACAAAGAA
ATCACGTACGATGAGAAGAATCGTGAAATCGATGCATGGAGTCTTGAACG
AGGTGACGTCATCGATCGGTTGGACACCATCTCGGAGAATATACACAAAG
ATCGAACTGAGTTTAATAAGACACTAAAATTAATACATTCGAAATTAACA
GATTTAatgaaatcagagaaaaatagtGTTCTTCAAAATGTTGCACCTAG
AGTTGACGGGAAGAAAAAGACACGAGTACGTTGCCCGAAAACGTATAAAA
ATCCTAGCGGTTACGTTATCAAAGACTCCGTTAGGGCGCCGTGCATCCAC
ACGCTTATCTCCTTGTTATTTTAATTTCAACTCACGTATCACATTACGAT
CGACGTGGCACGATACGGGAGACGTGGGCCGATGCTTCACGTTGGAACAT
ACGAGGTGATTTACCGTGGACAGGTAGTTTTCAACGTAGGATACGTGAAC
AAAACGCATAAAATATCTCACAAGTTACGTGAAGAGATGAAACATCACGG
TGATCTGATTGTTGGTGACgtcaaagaaagtttttatacgctgtcaaaaa
aattatcgattGGAATCGATTGGCTACATCGAAATCTGGTCTTCGATTTT
GTTCTAAAAACGGACGATGACGTTTTTATAAACATTCCTAAGGTTTTGAA
AGCGTTAAATACGTTACCCAGTCACATTCAATATTTCGGCCACGTAATGT
GGCGTCAACCTGTTGAACGCAAGGGGCGTTATAAACTCACGCCCGATGAA
TTCAAACACGACCGATTCGACCCGTACTGTTCTGGGGGTGGATTCATAGT
CAGACAGGGCGTTATCGAGAAAATTGCTTGGTACCTTGTCTTTAATAGAC
CTTTGAAATACGAGGACGCCTATTTCGGATCGTTGGCGTTTAAAGCGGGC
GTTGTACCATCCAAGGCgtatgataaatattttttgatgaggAACCATAA
ATGCATCTATCACGGAAGAGATGTTTCTATCGCACAGGAGTGGACCCTCG
GTGTATGAAGTCTTTAATGATCAGATCAAGCACTCAAATAGatcactttt
ga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000142_pilon | genome | sc0000142_pilon:557740..559065 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1264-1320:1270 |
| Aaloc | 1234-1263:1239 |
| Aaloc | 694-1233:698 |
| Aaloc | 571-693:574 |
| Aaloc | 73-570:74 |
| Aaloc | 1-72:1 |
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