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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:438211..443293+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014141 ID=XLOC_014141|Name=XLOC_014141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5083bp|location=Sequence derived from alignment at sc0000142_pilon:438211..443293+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACGACAAAAATACAGAATTAGCTTCAGTAAGTCATTTTTTGATCT
ATTAAACCTAAGATTATTACCATAAAATCCAACTGAATACTCTTATAGGT
TCCaaaaaaaGGggagtttggaaaattttcaagattttaataaatggggg
gggggcctaattgacggtggggttggaaattgtacttctgaaaacccaaa
aataaggtaaatgtAGACTTGAATCATTTAGAGCAAATTAAGGGGCATTC
TCTtcgacagctgaaaatattcttaaaaattggtggggtggaaatatttt
gaaaaattaacaaacgtttatttggaacctaagagcaGTGCTCgataata
aacaaaaaagataCCAGAGCCaagtaatatttgaaaataattttctttca
ataaacacTCGGATTTTTAGATCATTTCTCTTGTACATTTTTTCAGAGGG
AGTAATTTAGCGGACAGTTTGaagtatttatttaatttagcgggaattta
attcGGCGGATGgcgggaaaaaataaatttggcgggaactaaatttgacc
aaagtccaccaaatctgccaaattttcttcaCTTAAGGTAAAGTTTGCTC
CAAAAAATTGGCAGTCCGCCCATTTTAATACACTTCTCTTAAAGAAGAAG
ATAATATTAAAAGTATAGgaaaaagattaaaagacttgtgaatctttcga
aaattttgaaaaatgaagatgaaaaaatgaagattttattctacttcatc
aaaaattttgaatttatactTTCCTGAAACTTTGAACTTGatttgctcca
catccgtgtcaaaccaatgtgaaaaagcttgtgaataaaggttgatgagt
aagcaaacaatgggcttttccagaaaaaattcgtgcaccccctgttgagg
aggtccatttccgttccaagggggtaaggtttgaaatgcagtggaattcc
ataagggtagatgaaaatccgtcaaaaataagcggaattccaagggggta
atgattgaaaatttgtaaaaattcggaattccagaagggtatgatcctaa
aattgcctggaattccaagggggtagggacaaaaggttggacctcctcaa
cagggggtgcacggtttttttctggaaaagcccaatatcactcttattta
taaacaaaaccttGAAGATGATCTTTTCAACAAGGTATAAAGTCTACACT
TATTATATATCTTACTTTTTTAAGAGTCATTAATGTATCAAAATGTGTGG
CGGACTGTCAAATTTTTTGGAACAAACTTTAGTAACGACAAAATAGGGGT
AAAAATTTTTCGCCCTTCAATATTGTGATCAAATCGAAACAGCCCAATGA
AGTTTTTGTCATATATTTCCatattaaaaaactttcttttctcttttcat
aAAGGAAAATTTCTGGAGTTTTACAAGGGTTGCGTGTGCGCTTCGCCAAG
AACCTACACTACAGGAAGAAAACTGGTGACAACTAATAAAGATTATTGCT
ATGACGATATTTGCAAAAaagtcactttcgattttggtAAGAAaggcaat
tataatttttaactGGTTTCTTGCCCTGAGGCTCAATATTAGTCTGGACA
TCCATTGTATGATTATTTCTTTGCTGCCCGtgtcccctctgatatgtttt
gacaTAGGGGATGCGTAcacgtattttttattttaagaaacacactttta
agaaacatgaggctcagaatgtctaaaaactaagaaacatctaagaaaca
tgctgaggctgagaatgagaaaataccattttttaattcggtttttttaa
gaaccttccaatccagcctttcataaggctgattatgtcaaaaagtttag
aaacatgtaagaaacatttaaggctcaaaaggccgatttcttaagaaaca
ttgaggctccttggtaaaactagtttcttaaaaaaaaaacgtgtattgtg
tACAAAATTCTCGTTCGAGAGTTAGCCCCATCTTTGTGTTCTTGAGTTTT
AGAATCTTAattagcttgattagtaagttttatatgagagatctttaaat
ttcatttaatttttaattaagAATTAAAATGACTAGACTTTAATACAACC
ATTGGATTTCTGAagctttttaaattgaaaattgaaacatgttaCTTTAA
GGCTTACACACTTTcgtgagcagaaactttcgcaaggtcgaaaaatcgcg
aaatttgcggcatttactttcgcgaatttgaggaaaaaatgtttttcggg
agcataaactttcacgaatcgttggatgaaaatgagaattttcaaataaa
aattccctttaaagtgaaaaatattccttaaatccgcTAAAGAATgttgc
tcttcgactttaaaaaaaacattaaggtatgtggaaaccttcgtttggaa
tttttatcaaaaaaattttttttgtttaatctgATGTAAAATTTACAGAG
CTTTCCAGACATGTAATTATTGTTTATTAattccaaatattttggatgtt
atgATAGAATTTGTATCTCTTCCTTGTTTCCCTTGTATCTTGTAATTTGT
ATCTCAGGTCGAGCTCGTcatgtatacatcagattataaaaaacagGACT
GGCCTCCTGTCTAAACCTGTTATTTTGAAACAGGAGTCCAGATTACGGAG
ACTGATTTTGAAGTGGTTCGAAAATCGTAGAAATAATTAAATTTAGCGGG
AACTTATTTGACGATCGATGCATTTTCCTTTATTTGCGGTGAACAGAACT
AATTTCGCCGAACAGCGAAgtaaattctttcttttttcgcTCATAAAAGA
GCGCTTTAAACTAAAATTGGGGTTTTTATTatgaaattataagaaaagGT
AATTTTGGTAAGTAtttttttGACGAAATATTCAAAAGAATTTGTTCCCT
CAACTTTTTCAGTATTGTCCAgctaaattttcttcatttatggATGTTCT
TTTTGGCTACCGGTAATCTAGATTCaaaaaaaGTTACACGCTGAAAAGAA
CCCAAACATGACCTATTTTGCTTTACCCAAAAACCGAGAAAATTGCATTA
AAAGTTAACGTAGCGTGGCTTAAATTTCAGTTTCCCACAGTACTGAAGGT
AGGAGTTGTTAAAGGTATTATATGAATGCATTTTTCCTTTAGAACCAGGA
CCAGTGAATGTACAGATCAAACGATGGATACCAAGCCAATCGTACACATC
ATTCGAGAATGCCGTTCGAAGCAAAGATACAAACGCTTATAAAAACTTAG
ATAGTTTCATGTGGAGAACAGCGACTTTTGATGAATTTGGTATAGATATT
TCACTTTAATTTGACACCTTAAAATTGGGGAACTAAGTCTGGTAAAAAAT
TTAGTGAGGTAAAATTCTACCCTGGGAAAACTGACACACGAGTTTTTTCA
ACGGTTATTTAATGTTCGCATTAGTAGGGGAGGCAACCCTTAGGATTCGT
AGCATCTTTGGGACTCAACCACTGGGTATTGGTTCGAAGAAGGTATAAGG
CCTGTCAAATAACCCCCGAATAAGGCCTGTCAAAAGTTTTTGTGGCCAAA
GAACTGACGTTGTAGGTAAAACTTCTAGCCCTGAACTGAACCAGGTAAAA
TATGCAAAGAAAcgcttttataaattttttaccttatttacttgaaattt
aaatcaaaacaaatgtataTAATAGTTAGTCATCTGGAATCTTAAATCTT
AAATCGCTATTTCTTCCGTAAGGAATTAGATTCCGTATGTATCCTAGGGT
CTGATTTTTGCTTTACGGtcaaagattcttttttttttaaagtctatTAC
CACTTATTCCCGTCGATGTCGTCAAATAACCCCCCTCGACAGTGGTAGAT
AAAGTACAGTGGAGCCTCCATAACTCAATAAGCACATTGCGCATAATAAG
CACGGGGAATGCAAATATGTTCGATcatggaaattttgagttataaagaa
aggtttttaaggcattgttaactgaagaacCAGCAAACTTGtccgagtta
aggagacgttcgagttAATGAGTTCCACTGCATTAAAATTGTATTGATTT
ACATATCTTAAAGTAAATCTGAGACCGCAGCcggaggctcctctttcgaa
agctatctacccgaaggtaggggagggcgccactcttctccctggatttc
tccacttacccttgatcattctcttaattgctgagcatcaagcagaaatG
CATCAAGGACCATATTGGGAATCTTGGTACGACcgggctgggggttgaac
ccacaaccttgtgcaccatagactagtaaactagtcgtttaTTAAtgata
ataaaactgtcaatcaaataatgtaaacactaattgaatattcagcgcgc
gtgagagaaaaggaaaataaccaataattcagaaaagacacgcaacctca
cctcttcgaatctttttatttggagctttaattttttgtatatgggtctg
ttttcaacgactagtttactagtctatgaGTAccatagccggatgctcta
aCCCTTGCACTACCATCCCTAAACATATTTTGTTATACCGTAGGTACGGT
TTGTCGCGCTATTTTCACAGCACCGATGACGGGTGAATTCACTTTCTGGA
TGTTGGTTAATGAGCACGGAAAATTCTATTTTGGAACGGATGAAACAGAA
GCTTCGAAAATATTTCGAATGGGCGGAGAATTTATCGGCAGTTTTGGAGA
GTAAGTAACTTTGTTCCTTCCTTGGTTGCCGTAAGAacacttttttaata
agaaaaccctaaaatatttgaagccttcgtaGTCCAggaaaaaaggatca
aaatctcACTATTAAAGGAACTATCTATGGttttttttATCTCCCTAAAC
ATCTCTAGTTTAGGTTTTTCGatgataaaatcaaattttttcatattttt
ttcagatcTGAAGAAAAGAATGTCAAATTTACAATGTGGTTGGAAAAAGG
GAAGAAATATTTTGCTGAGGCTGTCACATATGATTATTCAGGAGATGATT
ATTTATACATATTCATGGCACAGCCTGGGAGTCAGTCGAGAGAACCAATG
AGCTTCGAGTATTTGGAACCGTATACGGGATAA Coding sequence (CDS) from alignment at sc0000142_pilon:438211..443293+ >XLOC_014141 ID=XLOC_014141|Name=XLOC_014141|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1290bp|location=Sequence derived from alignment at sc0000142_pilon:438211..443293+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAACGACAAAAATACAGAATTAGCTTCAATGGAACGACAAAAATACA
GAATTAGCTTCAGAAAATTTCTGGAGTTTTACAAGGGTTGCGTGTGCGCT
TCGCCAAGAACCTACACTACAGGAAGAAAACTGGTGACAACTAATAAAGA
TTATTGCTATGACGATATTTGCAAAAaagtcactttcgattttgGAAAAT
TTCTGGAGTTTTACAAGGGTTGCGTGTGCGCTTCGCCAAGAACCTACACT
ACAGGAAGAAAACTGGTGACAACTAATAAAGATTATTGCTATGACGATAT
TTGCAAAAaagtcactttcgattttgAACCAGGACCAGTGAATGTACAGA
TCAAACGATGGATACCAAGCCAATCGTACACATCATTCGAGAATGCCGTT
CGAAGCAAAGATACAAACGCTTATAAAAACTTAGATAGTTTCATGTGGAG
AACAGCGACTTTTGATGAATTTGAACCAGGACCAGTGAATGTACAGATCA
AACGATGGATACCAAGCCAATCGTACACATCATTCGAGAATGCCGTTCGA
AGCAAAGATACAAACGCTTATAAAAACTTAGATAGTTTCATGTGGAGAAC
AGCGACTTTTGATGAATTTGGTACGGTTTGTCGCGCTATTTTCACAGCAC
CGATGACGGGTGAATTCACTTTCTGGATGTTGGTTAATGAGCACGGAAAA
TTCTATTTTGGAACGGATGAAACAGAAGCTTCGAAAATATTTCGAATGGG
CGGAGAATTTATCGGCAGTTTTGGAGAGTACGGTTTGTCGCGCTATTTTC
ACAGCACCGATGACGGGTGAATTCACTTTCTGGATGTTGGTTAATGAGCA
CGGAAAATTCTATTTTGGAACGGATGAAACAGAAGCTTCGAAAATATTTC
GAATGGGCGGAGAATTTATCGGCAGTTTTGGAGAatcTGAAGAAAAGAAT
GTCAAATTTACAATGTGGTTGGAAAAAGGGAAGAAATATTTTGCTGAGGC
TGTCACATATGATTATTCAGGAGATGATTATTTATACATATTCATGGCAC
AGCCTGGGAGTCAGTCGAGAGAACCAATGAGCTTCGAGTATTTGGAACCG
TATACGGGATAAatcTGAAGAAAAGAATGTCAAATTTACAATGTGGTTGG
AAAAAGGGAAGAAATATTTTGCTGAGGCTGTCACATATGATTATTCAGGA
GATGATTATTTATACATATTCATGGCACAGCCTGGGAGTCAGTCGAGAGA
ACCAATGAGCTTCGAGTATTTGGAACCGTATACGGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000142_pilon | genome | sc0000142_pilon:438211..443293 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 469-645:4907 |
| Aaloc | 313-465:4546 |
| Aaloc | 166-309:3145 |
| Aaloc | 34-162:1407 |
| Aaloc | 1-30:1 |
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