XLOC_014140 (mRNA) -

Overview
NameXLOC_014140
Unique NameXLOC_014140
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000142_pilon:469629..470463+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014140 ID=XLOC_014140|Name=XLOC_014140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=835bp|location=Sequence derived from alignment at sc0000142_pilon:469629..470463+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaataaatttttgctgtAATTTGCTTTTCAGTTGTTCCCAAGAACC AATTAGGTGCATTTGTGTATTCTCTAAATTGATATTATACTGTATCACAA CATTCGTTTTTTGTAATGATTTACCCTGTTTTACTAAAGGGATTTAAACG GAAAATAATTATGTCTAATGGAAATAAGTTAAATCCTGTTTGGCAAGAAT CTTGGGACACAAATGACACTATTTGGCAATTACCTGAGGTTAACGTGTCT TTACAAAAGCACTTCTCAGTATTTGAGTCTGCATCCTTTGAATCAAAAAG GATTTTTGTGCCTTTATGTGGAAAAACAGTTGACATGAAATGGCTGTATG ATAAAGGTTTTATAGTGGTTGGTGTAGAGGCCATTGGGAAGGCAATAGTG gaattctttgaagaaaaaaaaatggagTATTCAGTTCAACAAATGGAAGG GTACAAGGTATATTCTTCAAAAGATTCCAAATTGAAGGTCTTCCAaggaa atctttttgatttcaaTGCTGACATGCTTGGAGGCCGTTTTGAGTTTTTC TGGGATCGTGGAAGTCTTGTGGCAATGGAAAAAGAAGATCAGCAAAAGTA TGTTGATTTCATGGCTGGCGTACTGTGTACTGGTGCCATCGGTCTTCTTG AAGTCATGGAGTATGAGTCTATTGAGCCTCAACAGCCATTCCCGTTAAAT CAAAAAGACCTTAACAAGTTATTTAGAAAGGACTTTGTCCAAAAAGAAAT TGACCGATATGAGGCAACTTTTGATTTTGTCATGACTTTGGTCATTTATA AAGTTCAGAAAATGTGTTTCAAAGGTAAACAATGA

Coding sequence (CDS) from alignment at sc0000142_pilon:469629..470463+

>XLOC_014140 ID=XLOC_014140|Name=XLOC_014140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1670bp|location=Sequence derived from alignment at sc0000142_pilon:469629..470463+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaataaatttttgctgtAATTTGCTTTTCAGTTGTTCCCAAGAACC
AATTAGGTGCATTTGTGTATTCTCTAAATTGATATTATACTGTATCACAA
CATTCGTTTTTTGTAATGATTTACCCTGTTTTACTAAAGGGATTTAAACG
GAAAATAATTATGTCTAATGGAAATAAGTTAAATCCTGTTTGGCAAGAAT
CTTGGGACACAAATGACACTATTTGGCAATTACCTGAGGTTAACGTGTCT
TTACAAAAGCACTTCTCAGTATTTGAGTCTGCATCCTTTGAATCAAAAAG
GATTTTTGTGCCTTTATGTGGAAAAACAGTTGACATGAAATGGCTGTATG
ATAAAGGTTTTATAGTGGTTGGTGTAGAGGCCATTGGGAAGGCAATAGTG
gaattctttgaagaaaaaaaaatggagTATTCAGTTCAACAAATGGAAGG
GTACAAGGTATATTCTTCAAAAGATTCCAAATTGAAGGTCTTCCAaggaa
atctttttgatttcaaTGCTGACATGCTTGGAGGCCGTTTTGAGTTTTTC
TGGGATCGTGGAAGTCTTGTGGCAATGGAAAAAGAAGATCAGCAAAAGTA
TGTTGATTTCATGGCTGGCGTACTGTGTACTGGTGCCATCGGTCTTCTTG
AAGTCATGGAGTATGAGTCTATTGAGCCTCAACAGCCATTCCCGTTAAAT
CAAAAAGACCTTAACAAGTTATTTAGAAAGGACTTTGTCCAAAAAGAAAT
TGACCGATATGAGGCAACTTTTGATTTTGTCATGACTTTGGTCATTTATA
AAGTTCAGAAAATGTGTTTCAAAGGTAAACAATGAatgaaaataaatttt
tgctgtAATTTGCTTTTCAGTTGTTCCCAAGAACCAATTAGGTGCATTTG
TGTATTCTCTAAATTGATATTATACTGTATCACAACATTCGTTTTTTGTA
ATGATTTACCCTGTTTTACTAAAGGGATTTAAACGGAAAATAATTATGTC
TAATGGAAATAAGTTAAATCCTGTTTGGCAAGAATCTTGGGACACAAATG
ACACTATTTGGCAATTACCTGAGGTTAACGTGTCTTTACAAAAGCACTTC
TCAGTATTTGAGTCTGCATCCTTTGAATCAAAAAGGATTTTTGTGCCTTT
ATGTGGAAAAACAGTTGACATGAAATGGCTGTATGATAAAGGTTTTATAG
TGGTTGGTGTAGAGGCCATTGGGAAGGCAATAGTGgaattctttgaagaa
aaaaaaatggagTATTCAGTTCAACAAATGGAAGGGTACAAGGTATATTC
TTCAAAAGATTCCAAATTGAAGGTCTTCCAaggaaatctttttgatttca
aTGCTGACATGCTTGGAGGCCGTTTTGAGTTTTTCTGGGATCGTGGAAGT
CTTGTGGCAATGGAAAAAGAAGATCAGCAAAAGTATGTTGATTTCATGGC
TGGCGTACTGTGTACTGGTGCCATCGGTCTTCTTGAAGTCATGGAGTATG
AGTCTATTGAGCCTCAACAGCCATTCCCGTTAAATCAAAAAGACCTTAAC
AAGTTATTTAGAAAGGACTTTGTCCAAAAAGAAATTGACCGATATGAGGC
AACTTTTGATTTTGTCATGACTTTGGTCATTTATAAAGTTCAGAAAATGT
GTTTCAAAGGTAAACAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_014140XLOC_014140-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000142_pilongenomesc0000142_pilon:469629..470463 +
Properties
Property NameValue
Aaloc85-834:86
Aaloc1-84:1