XLOC_014111 (mRNA) -

Overview
NameXLOC_014111
Unique NameXLOC_014111
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000264_pilon:196996..198372+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014111 ID=XLOC_014111|Name=XLOC_014111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1377bp|location=Sequence derived from alignment at sc0000264_pilon:196996..198372+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACAATATTGCCTTCATCTTACTGGTGAAATCCATGTTGCACTT TTGTCAAGGATATAGTCAACAGCTAGCGAGTATATCGTTTGACAGGATTA AAGGATCGATTTTTTATGGATTGGATCGATTCAAGGGTGAATATAGTGCG GAATATTGTTTGAGTAAGAATGCCGTTTGTGATAGATTGTTCAGTGGCAC TTGCAGTTGGTGTATTTGCAAGGATATGATGACCTTTGTTTCGTATCGAG ATGGATGCAAGGATAGAAGAGATGCTGATGTTATTCTGGGAGGTTAGTTT TGTAatctcgtccccgtgtatcccaggctttatttacgttactgattgag gctatcagtaagcatcagaaagctgataatacgcagggaacgaggtttgT TTTTCTAATCTATCTTTACCAGTAGCGTGGTGCGTCAACCGAAGAGGGAG ACAATATTCGAAAGCTGGGATTTTATTGGCGCCccttttaaaaagtaaaa taccTTTGTGTGTAAAAAAGCAAAGAGGcatcaaaatcattattcagaGG CGCCTTTTTCCAAGACTTGTTGCAAATGTTACCATTCTTAAAAGTTTCTT CTCCTATAAATTATCTCTTTTAATCCATTTGATAGTCTCAGGACAAATGT GCTTCGGAGTTCAAAATAACCAACAAGTTTACCCAATGTTCACCGTGGAT GAATTGTTTAGCCAATGGTTTATATTGATCCCTCAAACGACATACTATGA AATCCCTACGCAAAACAGCACAGTACATTATGATGCTAATTCATCTCAAT GTTGGGCTAAAGAAGTTTACTTAATCGATCTAAATGGAAAAAGGAATCTC CTTTGGTGTAATTACAACCAAGCAAAGTTACGGATTTTATCATATAATGA TGGAAGACACTTTATTAAGGTGAATTCCAAGTTATGTAAAAAATGTGCGT TATTTTGCTCTCCGTTTCGTACCCAAAAAGAGATTacattttccttttga aaatcaTCGGAAAGCATTGTTTAGAATTTTTCCTCAGTGGAAAAtgggat gaaaatttttatcaaaatcacaATAAGGATTGTTCCTAGGtcgaaaaatc cagtggggatagtTATGAAATGCAATTATTTTCCCTTGATGAATTTGAAG TGGAgctgaaatcaaagtcaatttcccagtggagaTGAAATTGTAGAGCA ATTTTACCAACAGGAGCGTCCAAATTTCCCAGTGAATCTAAAGTCCCAGT CGGTCTATGACACggagatttttaaatttaacaacttttttattcattaa AGGCAACACAAACTGCATCAAAAGACGAATTCCTTCAACATTCTGGTAGA ATTCTATTAGTGAACATTGACTGCAAA

Coding sequence (CDS) from alignment at sc0000264_pilon:196996..198372+

>XLOC_014111 ID=XLOC_014111|Name=XLOC_014111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1302bp|location=Sequence derived from alignment at sc0000264_pilon:196996..198372+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACAATATTGCCTTCATCTTACTGGTGAAATCCATGTTGCACTT
TTGTCAAGGATATAGTCAACAGCTAGCGAGTATATCGTTTGACAGGATTA
AAGGATCGATTTTTTATGGATTGGATCGATTCAAGGGTGAATATAGTGCG
GAATATTGTTTGAGTAAGAATGCCGTTTGTGATAGATTGTTCAGTGGCAC
TTGCAGTTGGTGTATTTGCAAGGATATGATGACCTTTGTTTCGTATCGAG
ATGGATGCAAGGATAGAAGAGATGCTGATGTTATTCTGGGAGATGAAGTA
CAATATTGCCTTCATCTTACTGGTGAAATCCATGTTGCACTTTTGTCAAG
GATATAGTCAACAGCTAGCGAGTATATCGTTTGACAGGATTAAAGGATCG
ATTTTTTATGGATTGGATCGATTCAAGGGTGAATATAGTGCGGAATATTG
TTTGAGTAAGAATGCCGTTTGTGATAGATTGTTCAGTGGCACTTGCAGTT
GGTGTATTTGCAAGGATATGATGACCTTTGTTTCGTATCGAGATGGATGC
AAGGATAGAAGAGATGCTGATGTTATTCTGGGAGTCTCAGGACAAATGTG
CTTCGGAGTTCAAAATAACCAACAAGTTTACCCAATGTTCACCGTGGATG
AATTGTTTAGCCAATGGTTTATATTGATCCCTCAAACGACATACTATGAA
ATCCCTACGCAAAACAGCACAGTACATTATGATGCTAATTCATCTCAATG
TTGGGCTAAAGAAGTTTACTTAATCGATCTAAATGGAAAAAGGAATCTCC
TTTGGTGTAATTACAACCAAGCAAAGTTACGGATTTTATCATATAATGAT
GGAAGACACTTTATTAAGTCTCAGGACAAATGTGCTTCGGAGTTCAAAAT
AACCAACAAGTTTACCCAATGTTCACCGTGGATGAATTGTTTAGCCAATG
GTTTATATTGATCCCTCAAACGACATACTATGAAATCCCTACGCAAAACA
GCACAGTACATTATGATGCTAATTCATCTCAATGTTGGGCTAAAGAAGTT
TACTTAATCGATCTAAATGGAAAAAGGAATCTCCTTTGGTGTAATTACAA
CCAAGCAAAGTTACGGATTTTATCATATAATGATGGAAGACACTTTATTA
AGGCAACACAAACTGCATCAAAAGACGAATTCCTTCAACATTCTGGTAGA
ATTCTATTAGTGAACATTGACTGCAAAGCAACACAAACTGCATCAAAAGA
CGAATTCCTTCAACATTCTGGTAGAATTCTATTAGTGAACATTGACTGCA
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_014111XLOC_014111-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264_pilongenomesc0000264_pilon:196996..198372 +
Properties
Property NameValue
Aaloc571-645:1303
Aaloc544-570:893
Aaloc295-543:638
Aaloc1-291:1