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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000264_pilon:168924..172000+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014108 ID=XLOC_014108|Name=XLOC_014108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3077bp|location=Sequence derived from alignment at sc0000264_pilon:168924..172000+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATCAATGTTTTATGGTTGGCAACCATTTGTATCTTGTATTTCTC
AGTTATCGTTAAAGCCGAATCAAGTAAGTTTGTTTCCATAAATTAATGGG
TAAAGAAATAAGatgtatatttttccaaattcgggttttgagtttgaaat
gccttaaaatcttcttaacttgttcttaatattttgagccatcgaagcct
cgtgttcttatgtagtttgtttaCGTGAAGTGCTGCTTTAAGGCTCCTTc
ggatttcttgaattttgggACTTTTAACTTTTGTAATAAACATTGTCTTT
CATTAATAGATTTCACAATAGAATGTGACACACAAAAGATGACAATTTAC
ATTCTGAAAGACACAATTTCAGTCCCTGAAAGTGATCTTTCTCAATACAA
CATATCATGGAATGATCCTACTTGTGGACCAAGTGACAAATCCAATGAAA
CATATTTAATTTTGGAGGCTGGTTATTCTTCATGTGGAACTCGGGCTATT
GACGCTGGAAATGACGTCACATTCAAAAATCAGGTAAAGTTTCCTCCACG
GTCTTTTCAACCCAACATGCAACTTTACGCGCGAAGACATTGCAAGGCTT
CATGAATTGAGAAAAGTTTTGCTTTGGATAAATATCCGAGGATATTCTTT
AGGGCCTTTAGGGAAAGGTTTTGCCAGATGCACTAGATTCTCTTGAGCAC
GCTCAAATTAAACATTGTTTTAGCATATTAGGTGTGGATAGGGTCTAGGT
GAATCTTAAACCTTTTTCCGggcaagaaaattaattcctcAAGCTTTTCC
AAACTTAGGTTATGAAATGAGAGCTTCAAATCACACCAAGAGAGATTGAT
TGGTAACCTGTACTgtacaatagaatttttgaacattttctaaataataa
atgtCGCTATATGGGAATAGTGTAATGAACTTGCATTCAATATTCAGGTC
TCGGTCAACTTAAATACTACAAACGCATACAAAAACGATCTATTGGAAAG
GATCGATACATTTGCTACATATTCCGTTGAATGCAATATCCCACAAGGTG
TGAATGTAACACACGAACATGGAGCCAATATCACCAAAACTGATTTGGTG
GAAGGTGTATCGAGTAAGCAGACATTTGAGAAGTTGATTTTAGTGAATTT
GAGACCGACgggggggggCTAGGTTTGTGAGGTGAAGGGTATGCCTGaac
caaaaaattgacaatcgaccctttgagagaagaATAATTTTTGAGACACT
TTGAGagaatttgtcatttttgtgaaaatttcaggTGAAGTTTTCCcaaa
attcaattaaaattttcgaaaatttggaCCCTTTCAGAAAGAAAAACCCA
TTCTTCCTCATTACATTTAAGATGTGTTTTCAATTCGAGGAAAATCCATA
ATTACTGATCTTGGAAGACGATACAATTTTACTTGAAATTAAGGTTTAAA
TTCATTGAATCAAATGTTTTGGGTCCCTTCCAAGTAATATtaaaatcact
tttatcaatCTAATTTTAGGTTCGACTGACCAATTCACTGTCTCGATGAA
TCTTCATGAAAACACAAAAttcaatgaaactttgaaaTATCCTGCAGTCA
TTGATAGATTGGGACGTTTTAATTTGGAAATAGAAATTGACACTGTTGCT
GACCTGTTTATTATTCCACGAAACTGCCATGGTACTTCAACTTCAAGTCG
AGATGATGTCATTCGGGAAGCTCTTGTTACTGACGGGTAATTAAACAATT
TCATTTGCCATAGGTATTTTCCGTCTACTTTTAAGATATTTACGTCAAGT
CTCTTTTACGAAACAAATCGGTTTACTTTCACACCCCCtatctcacagac
ccggtaggattttttcgttcagtggggatagaaataacagactgaaactc
gatgtgGATTGATTCTTTTGATCTTCTATTGACCTAAATTCTTTTCTTTC
CAGTCAGAAAGTTagagtgggaagggttcccagtggatCAGTGAGAAGGG
GTGCTCTTATAAACCTTATGTTCTCTAAACTCTTTTCAAATACAACTGCC
AAGAAGTCATAAGATTCATTCTTTTTGTCCACCAAAGCAAGGTTCAACAA
GTAACTACAGCTAACATCTATTTGATCTTTTTTGATTGGAGAAAATAATA
TTTACAAGTAAATATATCTTTTGAACGTCAATTTTGTCTAATTTTAAGCA
ACCTCTTCTACTAAactatttcattgtttttagaTGTCCCAATGCTGacc
atgttttcaaaaaagaaactgCAGCTGATAATGGAAAGAAATTCAGATTT
TCATTGAACGTGTTTCGATTCAAAAATTCGAATGGTATGGTCTACATTCA
TTGCTCAGCTCACGTCTGCTTGGAAGGAAGTAACGCCACAAAATGTCAAT
TCGGTTGTGATGTGAATAGCAGACGACGAAGACGTTCAGTGGAAGATAAT
GCTTTGATGCCAGTTGATGCTGATTTATCCAAAGATTATGACATTCGAAC
TGGACTAATTATTGTAACAGAAAACTCTCAAAGTAAGTTTGAATGCGTTG
AAACTAACAACAAGGGAAATcttaaatctttttaaagtttgggATTTATA
AATCTTTATTTATACCCCTGCCTCACCGGATATTGTTTTGGAATGCAAGT
CAATTTCCTATCTTGGccgaaattgtagggtattcttTCAATTGAGTGGG
ATCTGACCGCATCTGTGACACCACGGTGTTTGTTGTTTACACTTCAACAA
AATTCCAATAGAGATTGACTGATATTACAGTCAATCTCAGTGGAAGCAAG
TGTTCAATGTAACTTTTAAAATCCACGAAACTTTGGGGTATTTTTCTTTG
TGACAGTAAAATCTACCATGTTTGTTTGACTTTGTTagtatttctttttc
ttagaTAATGTCCCAGCTGGAAACGATAGCCAAGCATCAtccaaaaatga
taaattcTTTCAAACCACGAGCAATATCATTCTTATTGCAATCGTCTTGG
TGATGTTGACTTTCGTTTGCTCTCTTTTGGCTTTTGTTGGTGTACGCCGT
CATCGAAGTGGTTCGAGAAAGAATGtg Coding sequence (CDS) from alignment at sc0000264_pilon:168924..172000+ >XLOC_014108 ID=XLOC_014108|Name=XLOC_014108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000264_pilon:168924..172000+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAAACATCAATGTTTTATGGTTGGCAACCATTTGTATCTTGTATTTCTC
AGTTATCGTTAAAGCCGAATCAAAGAAACATCAATGTTTTATGGTTGGCA
ACCATTTGTATCTTGTATTTCTCAGTTATCGTTAAAGCCGAATCAAATTT
CACAATAGAATGTGACACACAAAAGATGACAATTTACATTCTGAAAGACA
CAATTTCAGTCCCTGAAAGTGATCTTTCTCAATACAACATATCATGGAAT
GATCCTACTTGTGGACCAAGTGACAAATCCAATGAAACATATTTAATTTT
GGAGGCTGGTTATTCTTCATGTGGAACTCGGGCTATTGACGCTGGAAATG
ACGTCACATTCAAAAATCAGATTTCACAATAGAATGTGACACACAAAAGA
TGACAATTTACATTCTGAAAGACACAATTTCAGTCCCTGAAAGTGATCTT
TCTCAATACAACATATCATGGAATGATCCTACTTGTGGACCAAGTGACAA
ATCCAATGAAACATATTTAATTTTGGAGGCTGGTTATTCTTCATGTGGAA
CTCGGGCTATTGACGCTGGAAATGACGTCACATTCAAAAATCAGGTCTCG
GTCAACTTAAATACTACAAACGCATACAAAAACGATCTATTGGAAAGGAT
CGATACATTTGCTACATATTCCGTTGAATGCAATATCCCACAAGGTGTGA
ATGTAACACACGAACATGGAGCCAATATCACCAAAACTGATTTGGTGGAA
GGTGTATCGAGTCTCGGTCAACTTAAATACTACAAACGCATACAAAAACG
ATCTATTGGAAAGGATCGATACATTTGCTACATATTCCGTTGAATGCAAT
ATCCCACAAGGTGTGAATGTAACACACGAACATGGAGCCAATATCACCAA
AACTGATTTGGTGGAAGGTGTATCGAGTTCGACTGACCAATTCACTGTCT
CGATGAATCTTCATGAAAACACAAAAttcaatgaaactttgaaaTATCCT
GCAGTCATTGATAGATTGGGACGTTTTAATTTGGAAATAGAAATTGACAC
TGTTGCTGACCTGTTTATTATTCCACGAAACTGCCATGGTACTTCAACTT
CAAGTCGAGATGATGTCATTCGGGAAGCTCTTGTTACTGACGGGTTCGAC
TGACCAATTCACTGTCTCGATGAATCTTCATGAAAACACAAAAttcaatg
aaactttgaaaTATCCTGCAGTCATTGATAGATTGGGACGTTTTAATTTG
GAAATAGAAATTGACACTGTTGCTGACCTGTTTATTATTCCACGAAACTG
CCATGGTACTTCAACTTCAAGTCGAGATGATGTCATTCGGGAAGCTCTTG
TTACTGACGGaTGTCCCAATGCTGaccatgttttcaaaaaagaaactgCA
GCTGATAATGGAAAGAAATTCAGATTTTCATTGAACGTGTTTCGATTCAA
AAATTCGAATGGTATGGTCTACATTCATTGCTCAGCTCACGTCTGCTTGG
AAGGAAGTAACGCCACAAAATGTCAATTCGGTTGTGATGTGAATAGCAGA
CGACGAAGACGTTCAGTGGAAGATAATGCTTTGATGCCAGTTGATGCTGA
TTTATCCAAAGATTATGACATTCGAACTGGACTAATTATTGTAACAGAAA
ACTCTCAAAaTGTCCCAATGCTGaccatgttttcaaaaaagaaactgCAG
CTGATAATGGAAAGAAATTCAGATTTTCATTGAACGTGTTTCGATTCAAA
AATTCGAATGGTATGGTCTACATTCATTGCTCAGCTCACGTCTGCTTGGA
AGGAAGTAACGCCACAAAATGTCAATTCGGTTGTGATGTGAATAGCAGAC
GACGAAGACGTTCAGTGGAAGATAATGCTTTGATGCCAGTTGATGCTGAT
TTATCCAAAGATTATGACATTCGAACTGGACTAATTATTGTAACAGAAAA
CTCTCAAAaTAATGTCCCAGCTGGAAACGATAGCCAAGCATCAtccaaaa
atgataaattcTTTCAAACCACGAGCAATATCATTCTTATTGCAATCGTC
TTGGTGATGTTGACTTTCGTTTGCTCTCTTTTGGCTTTTGTTGGTGTACG
CCGTCATCGAAGTGGTTCGAGAAAGAATGtgaTAATGTCCCAGCTGGAAA
CGATAGCCAAGCATCAtccaaaaatgataaattcTTTCAAACCACGAGCA
ATATCATTCTTATTGCAATCGTCTTGGTGATGTTGACTTTCGTTTGCTCT
CTTTTGGCTTTTGTTGGTGTACGCCGTCATCGAAGTGGTTCGAGAAAGAA
TGtg
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000264_pilon | genome | sc0000264_pilon:168924..172000 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 994-1164:2907 |
| Aaloc | 694-990:2235 |
| Aaloc | 478-690:1522 |
| Aaloc | 310-474:948 |
| Aaloc | 88-309:312 |
| Aaloc | 13-84:1 |
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