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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000306_pilon:209338..210803- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014081 ID=XLOC_014081|Name=XLOC_014081|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1466bp|location=Sequence derived from alignment at sc0000306_pilon:209338..210803- (Clytia hemisphaerica_ch_hm2_pilon)
CCAAGTTTTGTCTTCCTCCCAATCCTATCAGTGTGTTTTATCATACTCTA
CTTACGAACAAACTATCAAGTGACAATCTCAACCATAGATGAAGGATTCT
CATTCCAAAACTATAAAGCAAAACGACAAATTGAAGTAGCAGAAAATGAA
AAACACGACAAATGGATTGTCATCACTTCTATCAACCCTCCAACAGAAGA
TGTCAAGAAATTGGCAAAAATCCCTGGATGGAAAGTGGTCATGGTTGGTG
ACACCAAATCACCAAAAGACTGGAGGTAGGTTGATACTCTCATGAATTGC
AACACCTGTATTACACCCCTGTTTCGCAGCCCCGCTAAAATGTTGTTTCT
GACCCTTGTTACACAGTACGGAGCAGTCCATTTCACTCTACGGTGCTAAA
ATCGAAGTCGTATTCAGATTATAGAAATAAAAGCCCATTATCTTGTTTTT
TTTACAGTTATCCTAACGTCATTTTCCTGGATGTTGAAAAACAGAAACAG
CTTGGTTACAAATGTCATTCTTTGTTGAAATACAGAGCGTACACGCGTAA
AAATATCGGTTATTTATACGCCATCCAACATGGCGCACAAGTCATCTATG
AAACAGACGACGACAATAGTCCAACTAATGGACAAATCGAATTCGACCAA
TCACTGACTCGAGATTACTACGTTTACGATACAGGCTCACAAACACATGT
GGTTAATCCTTACGCTCATTTTGGTCAAAAGTCGATATGGCCAAGAGGTT
ATCCATTGGATAAGATTAGCCAGGAATCACCAAAGACATTCAGAAAATGT
CATGGTCGAGCAAGCATACAGCAGGGGGTTGTAGATGGCGACCCAGATGT
AGATGCCATCTTTAGACTGACCAGAAAAGACACCGGCGTTGATTTACGAG
TCACATTCGATAAGGAGGCACCACCAGTGCTTTTACCAAGAGGTCTCATG
GCACCTTATAATACACAGAACACGTTACACTTATATGATGCTTTTTGGGG
GTTATTAATTCCTCAGACTGTTGCATTTCGTGTGTGTGATATTTGGCGTG
GTTATTGGGCACAACGTTTGATGTGGGAAGTCGATCGATATCTTTCCTTC
TTCCCTCCAAATGCAGTGCAAATTAGAAACTCACATAGTTACTTAGATGA
TTTTATAGACGAACGTGAGCTGTATCACCAGTCTAGTGGTCTAGTTGAGT
TTTTGGTCAACTGGCAATCCAAACAAACAAACTTTCTTGATACTATATTA
CAATTATCAAGAGATATGGTTAAGGAGGACTTTTGGAGACCTGATGACGC
TCTGTTAGTTCAATACTGGTTGGAGGATTTACTATCTGTTGGCTATAAAC
CACCAACATTGAAAAGTGGTGAAGCGAAATGTACTTCTGATCAGATCACT
TTCACCTCACAAGACCAACCTTCGTCGTATCTTGGTCTTGGGGTAACCAA
GAAAATCATTTTCTAG Coding sequence (CDS) from alignment at sc0000306_pilon:209338..210803- >XLOC_014081 ID=XLOC_014081|Name=XLOC_014081|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2568bp|location=Sequence derived from alignment at sc0000306_pilon:209338..210803- (Clytia hemisphaerica_ch_hm2_pilon)
CCAAGTTTTGTCTTCCTCCCAATCCTATCAGTGTGTTTTATCATACTCTA
CTTACGAACAAACTATCAAGTGACAATCTCAACCATAGATGAAGGATTCT
CATTCCAAAACTATAAAGCAAAACGACAAATTGAAGTAGCAGAAAATGAA
AAACACGACAAATGGATTGTCATCACTTCTATCAACCCTCCAACAGAAGA
TGTCAAGAAATTGGCAAAAATCCCTGGATGGAAAGTGGTCATGGTTGGTG
ACACCAAATCACCAAAAGACTGGAGCCAAGTTTTGTCTTCCTCCCAATCC
TATCAGTGTGTTTTATCATACTCTACTTACGAACAAACTATCAAGTGACA
ATCTCAACCATAGATGAAGGATTCTCATTCCAAAACTATAAAGCAAAACG
ACAAATTGAAGTAGCAGAAAATGAAAAACACGACAAATGGATTGTCATCA
CTTCTATCAACCCTCCAACAGAAGATGTCAAGAAATTGGCAAAAATCCCT
GGATGGAAAGTGGTCATGGTTGGTGACACCAAATCACCAAAAGACTGGAG
TTATCCTAACGTCATTTTCCTGGATGTTGAAAAACAGAAACAGCTTGGTT
ACAAATGTCATTCTTTGTTGAAATACAGAGCGTACACGCGTAAAAATATC
GGTTATTTATACGCCATCCAACATGGCGCACAAGTCATCTATGAAACAGA
CGACGACAATAGTCCAACTAATGGACAAATCGAATTCGACCAATCACTGA
CTCGAGATTACTACGTTTACGATACAGGCTCACAAACACATGTGGTTAAT
CCTTACGCTCATTTTGGTCAAAAGTCGATATGGCCAAGAGGTTATCCATT
GGATAAGATTAGCCAGGAATCACCAAAGACATTCAGAAAATGTCATGGTC
GAGCAAGCATACAGCAGGGGGTTGTAGATGGCGACCCAGATGTAGATGCC
ATCTTTAGACTGACCAGAAAAGACACCGGCGTTGATTTACGAGTCACATT
CGATAAGGAGGCACCACCAGTGCTTTTACCAAGAGGTCTCATGGCACCTT
ATAATACACAGAACACGTTACACTTATATGATGCTTTTTGGGGGTTATTA
ATTCCTCAGACTGTTGCATTTCGTGTGTGTGATATTTGGCGTGGTTATTG
GGCACAACGTTTGATGTGGGAAGTCGATCGATATCTTTCCTTCTTCCCTC
CAAATGCAGTGCAAATTAGAAACTCACATAGTTACTTAGATGATTTTATA
GACGAACGTGAGCTGTATCACCAGTCTAGTGGTCTAGTTGAGTTTTTGGT
CAACTGGCAATCCAAACAAACAAACTTTCTTGATACTATATTACAATTAT
CAAGAGATATGGTTAAGGAGGACTTTTGGAGACCTGATGACGCTCTGTTA
GTTCAATACTGGTTGGAGGATTTACTATCTGTTGGCTATAAACCACCAAC
ATTGAAAAGTGGTGAAGCGAAATGTACTTCTGATCAGATCACTTTCACCT
CACAAGACCAACCTTCGTCGTATCTTGGTCTTGGGGTAACCAAGAAAATC
ATTTTCTAGTTATCCTAACGTCATTTTCCTGGATGTTGAAAAACAGAAAC
AGCTTGGTTACAAATGTCATTCTTTGTTGAAATACAGAGCGTACACGCGT
AAAAATATCGGTTATTTATACGCCATCCAACATGGCGCACAAGTCATCTA
TGAAACAGACGACGACAATAGTCCAACTAATGGACAAATCGAATTCGACC
AATCACTGACTCGAGATTACTACGTTTACGATACAGGCTCACAAACACAT
GTGGTTAATCCTTACGCTCATTTTGGTCAAAAGTCGATATGGCCAAGAGG
TTATCCATTGGATAAGATTAGCCAGGAATCACCAAAGACATTCAGAAAAT
GTCATGGTCGAGCAAGCATACAGCAGGGGGTTGTAGATGGCGACCCAGAT
GTAGATGCCATCTTTAGACTGACCAGAAAAGACACCGGCGTTGATTTACG
AGTCACATTCGATAAGGAGGCACCACCAGTGCTTTTACCAAGAGGTCTCA
TGGCACCTTATAATACACAGAACACGTTACACTTATATGATGCTTTTTGG
GGGTTATTAATTCCTCAGACTGTTGCATTTCGTGTGTGTGATATTTGGCG
TGGTTATTGGGCACAACGTTTGATGTGGGAAGTCGATCGATATCTTTCCT
TCTTCCCTCCAAATGCAGTGCAAATTAGAAACTCACATAGTTACTTAGAT
GATTTTATAGACGAACGTGAGCTGTATCACCAGTCTAGTGGTCTAGTTGA
GTTTTTGGTCAACTGGCAATCCAAACAAACAAACTTTCTTGATACTATAT
TACAATTATCAAGAGATATGGTTAAGGAGGACTTTTGGAGACCTGATGAC
GCTCTGTTAGTTCAATACTGGTTGGAGGATTTACTATCTGTTGGCTATAA
ACCACCAACATTGAAAAGTGGTGAAGCGAAATGTACTTCTGATCAGATCA
CTTTCACCTCACAAGACCAACCTTCGTCGTATCTTGGTCTTGGGGTAACC
AAGAAAATCATTTTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000306_pilon | genome | sc0000306_pilon:209338..210803 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 304-1311:1009 |
| Aaloc | 28-300:1467 |
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