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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000306_pilon:184078..189353- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014080 ID=XLOC_014080|Name=XLOC_014080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5276bp|location=Sequence derived from alignment at sc0000306_pilon:184078..189353- (Clytia hemisphaerica_ch_hm2_pilon)
CGAGACAGGGCAAGTAAAAAGAAAGAGAAAGAAAAGAGAGGAAAGATTTT
AACGATTATTTTTCGTCAAAAATTTTAAGATGAAGAATAAATTCAGGTTA
CAAATTTTCTATGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGGA
CGACAAATACAGTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACCT
ACATGAAAATGCAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTCG
AACGATCATCAATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTTG
TGAATTGAATCAACATAGGGAAGAAGATCATCAACACACAACACAATTAC
AAGATGAACAAGGATGGAATCATTTCATCAAAGACAAACAGGTAAAGACA
GACAAAAAATTGAAATATTGAACACCTAAAACAAGTTGTGAATACACCTT
TTCGACCGTAGCCGCCAATTGCCGCGCGGGCATTTTTCCGTTCGTTTTAC
CACCCAAAAAACGTCCCAGTCTTTTTTTGCACCTAAAGAAAATAGAAAAA
AGTGTAAAACAGGATTGGATCGAGCTTAGGTTGGTAAATTAAATAATAAA
GTGGCACGCGCCTGACCACGGGTTAATTTTCCCACGAAAGATAAGTACTT
TTGCCCCCCCCTACTACAAACAAGTTATTCCTGACATACTTCAATAGAAT
TCTCATATTATTCAAGGAATGGTTAACTCTATATATTTTGAATAGTGTAA
CATGAGTAGAGAGACCTAGATCGAAATTCCAATTTTAAGCTTATATTTTT
TTAAATACCCGGTATTATGTGCTCATAACGCATTATAGGTTAAGGGCTCT
GACCATAGCCAGAAAATTGATTTTAGTATCTGAACATAAAAGTTATGTTT
TAGATTTTTTAACACTTTTCACAAAGAATTGCCTTTATAAATTGCTTTTT
AATCAAATCCCTTAGGGTAATTAAGAACTTGCATTTACAAAAATTTTCCG
CAAAAATTTTTATTGTTCGGTAAAAGATACACCTTCTACTGCAAAAACTT
TTTCAAAATGTTTTTTCTTCGCCGAAAGCTCTTCAAAGTTAAAATACTCT
TCCTCGCAAAAGTCTTCATTTTCTTCTTCATCAAACTTTTTCAATGCAAT
TTTTGAATTTTCAGATTCAGGAATAGTTTGTCTAACAGAAAATGTATAAC
ATGCCATAGTCTTGTTGGCTACATCAGTCAGAAAACACATTTTAAACACG
GCAATTATGAAAAATTCACTATGGTCAGAGCCTTTAAGTCAGTTTACAAC
ACTGGTTACGTTTCCATTTTACGTTCCAATTTAATTCTATTTTCAGAAAA
CTGTCAACACAAATGACATCCTAATGCCCACAGGTTAGTTCAAATACAGT
ATTCATGATATATAAATATTCATGTTGGCGTCATATAGTATTCATAATAT
GCAAAGGGTTAACACGAAATTATGTAGTTTTAATTTTCGTCTATCAAGTC
CTTGGTGTGACTCGGCTGGGGATTGAACTCACAACCTTGCACAACGTAGC
CGATAAAAACCAGCCCCCATGACTTGCTCTCACTTTATACGTTTGAGAAA
ACCCCTTCAACTAAATTCTAAGGTAAAATAAATGGAATTAATGTTATCTT
TATGATGATTTAATACGCTCATTTTTTGCCTTTTTTGACTTTTTTGACAA
ATGATCTCCCAAATTTAAGTTTATCCTTCCTCTTTCCAATGCAAAAGGAT
TAATTCTTTAATAGTTTATAGAACTCGGACAAATTCTCTTCAAAGAGGAA
GATTTTTTTCTGGGACACCCGGTGGTTACGATATGAACCATCTTTATATG
CCTTATATACACCAAAACACGATAGTCCAGCATATAAAGCAATTTTTCTC
GCACAAAAGATCAGTTCGTGAACGTATGAAACCTAATTGATATTTTCTAG
TCTTCCGACCACGTCAAAACCACCACCTTGTGAAAAAATTCGTTTATCAT
AACATTTGGGAATTATCTTTCGATTTTAAACTCTTTGAAGAAGTTCCCCA
TTGGGTAAACATCGTCTCGTTCCAAAAAGTTGGTACGACATATTACACAC
AGTATGGTAATCGAATTCCATCTATTTGGACATTTGGAAGAAAAATGTAT
TTCTTCTATCCAGATGATACTAACCCAAACCAAGATTGGAACCTTGACCT
GAATCTACAACAGACATATTCTTTCAAGATGAGACAAACAACACATACAA
CGAACGAGAATATCAAACACATTGCCATTTATGTGAATAGAGAAAGAGTT
CACTACCGAAAGTTCACCTTAAATTTGAGTGTTGACTTTGTTGAATGCTT
CCTGACAGGTATCTTATGGAACTTCAGATACACACAAAGTCCGATATATC
CCGGTAAGTAATCCGTTTCTTACAAACCATCACGAAAGTAAAAAAGCTTA
ACCATGGCTTTAGAGCGTGTTCTGATCCAATCCTGAACTTGAAAACTATG
CAGTGGAGTCTCTATAACTCAAACAAGTAATTGTGGTCATGGAATATGGT
GACTGTTTATAAGGTAGTGTTAAGTGAAGGGACAAGAAAACTTCGAATTG
AGGAGACATTCGATTAATAGAGATTCAAGTTCTGGAGACTCATCTGTGTC
TTAACCTTGTCGCCCAATCGTAAACTTTTTCTAAAAGCAAAAAATAATAG
CATGAATTATTGCCGGGTCATTGTAATACCAGGGTTGCTACAGGTTTGCC
AAGTTGAAAATTCCAGACTTTTAGTCTCAAAAGCCATATTTTTCCAGATT
TTTTACCTGAAAGTGTCGAAAATCTTCCAGACATTTTAGCGAAATTTTAT
CCATTAGGAAGGTTTTTAGTCATTCCTTAATGAAAAGTTAAAATTAAACT
TTCGGGAAATGGGAAAACTTCCATCCTTGAAATTCCAAAAAATTTCTGCT
CGCTTCGCATCAAAATTTTGAGGGGGTGACGAAATTTTTCCCCGACATTT
TATCACCCGACCAAAACTTTTACCCGATTTTTTAAACCCCAACCAAAATT
AAAATCTAAACTTTAAACCTTTATTAACCGAAACAAGATTCGCAAAAATG
CGACTAAATATTTCCTTAAAAATGAAGGTCATTATTGACATATACTAGCA
AGTAGCTGTCGCTAAGAATGCCCCGGAGAGCTTCCTATCGAAATATCCCT
AAGTAAGCAAAATTACGCATGTGTAGATTTTAAATTCGTTTTATCAATAA
AATTTAAGTTGGAGGAAGAAAGCTTGGTATCAACTTTACTTTTATGACAT
GGGATAGACGGTCGGTCACATCTCAAAAAGAAAAAGAGAATTTATCGCTC
ACATGTTATCACAGTGAAAACGCCAAAAATTCTGAAATTTATTTGATTCT
TATAAAGTAGACACTTATAATAAAAATAAATATGCTCATCTTTTTCGCCA
TACTTTGTTTACTTTGTAAGAACTAATTACCGAAAGGCATGTTGCCTTCA
ATCAAGAGTTATTGATTTGATTTTTATAAAGTAGATGCTTATAATAAAAA
TAAATATGCTCATCTTTTTATTCATCCTTTGTTTACTTTCTAATAACTAA
TTACCGAAAGATATATTGCCTTCAATCAAGAGTTATTGATTTGATTCTTA
TAAAGTAGATGCTTATAATAAAAATAAATAAGCTCATCTTTTTCGCCATC
CTTTGTTTACTTTGTAAGGACTAATTACCGAAAGGCATATTGCCTTCAAT
CAAGAGTTATTGATTTGATTCTTATAAAGTAGATGCTTATAATAAAAATA
AATATGCTCATCTTTTTATTCATCCTTTGTTTACTTTCTAATAACTAATT
ACCGAAAGATATATTGCCTTCAATCAAGAGTTATTGATTTGATTCTTATA
AAGTAGATGCTTATAATAAAAATAAATAAGCTCATCTTTTTCGCCATCCT
TTGTTTACTTTGTAAGGACTAATTACCGAAAGGCATATTGCCTTCAATCA
AGAGCTATTGATTTGATTCTTATAAAGTAGATGCTTATAATAAAAATAAA
TATACTCATCTTTTTCGCCATCCTTTGTTTACTTTGTAAGAACTAATTAC
CGAAAGGCATGTTGCCTTCAATCAAGAGTTATTGATTTGATTCTTATAAA
GTAGATGCTTATAATAAAAATAAATATGCTCATCTTTTTATTCATCCTTT
GTTTACTTTGTAAGAACTAATTACCGAAAAGCATATTGCCTTCAATCAAG
AGATATTGATTTGATTCTTATAAAGTAGACTTTCTTTAGGCGCTAAAACG
GGCGTCAGTCAGGGCGTACGGAAGGCGTTTTGACACTGAAAATTATTATG
ATGGAGAAAGCCCGTTTTGACAAATATTTCCCTTTTGGAAAACGGGAAAT
ATTTAATAAGTGCTTAAAACGTCGAATTACAAGATCTTTTTTTGAGCTAG
TGAAGGAAACCAATTCATTTGGACAATTTAGTTGGGTGAAAGTGACTAAA
TCGTAAATTTCGTCGGGGAAAAGTGACGAATTTGAAATTTTGGTCGTGGG
AAAGTGACGAAAATGCCTCTAGGTGACGAGATTTTTCCCCGACTAAATAA
AACTTCGACATTTTTTTCCCCGATAAGGTAATTCGAATCTTTTTGTAATT
CGAGCTGAAAAATTAGTGCCCTCAGCTGGAAAGTAATTTTAAATACTCTC
TGTAATATGAATCTTTCTCGAATTCGAAATAAATTTTTCTTTAAGATAAA
CTCAACTGTATTTTTTAAAACCTTAGGTCAAAGAATTTATGTACCACGCG
AAGAAGAGCTTTTCAAAGAGATCAATAATTGGCCGCCAAAGGAATGGTTT
GTATCTTTTGATTACCAATTAACGTACAGTGCCCAACCAAACTATTGGCT
TTTCATTCTTATGTTTTCTGGTGGAATAAACCAAGAAACAAACAATCGTG
AAAAAAACTTCGTGAGAATTCAAAGACCGTCCAACGCACTTGCATTGAAT
GTCAGAACATGGACATCGACAAGTGGGGCACAACTATTAACACATCATGA
TCTAACAAACTCACTCAACACTTACATCAAATGTCAGATGCAACAGCAAC
GCGATCCAACTGATGGCAAACTTTACGTCACATTTTGGGTGGACGGACAA
CTAAAAGGGACACGAGTTCTCAATGAGAACCATCAAACATTTCAGAAAGT
ACGAATCACCTCCGGATATTCAAATTTACCACATGGAGTTGAATGGATTG
ACAATTTAAAATATGGTGAGCTTTGA Coding sequence (CDS) from alignment at sc0000306_pilon:184078..189353- >XLOC_014080 ID=XLOC_014080|Name=XLOC_014080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2762bp|location=Sequence derived from alignment at sc0000306_pilon:184078..189353- (Clytia hemisphaerica_ch_hm2_pilon)
CGAGACAGGGCAAGTAAAAAGAAAGAGAAAGAAAAGAGAGGAAAGATTTT
AACGATTATTTTTCGTCAAAAATTTTAAGATGAAGAATAAATTCAGGTTA
CAAATTTTCTATGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGGA
CGACAAATACAGTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACCT
ACATGAAAATGCAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTCG
AACGATCATCAATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTTG
TGAATTGAATCAACATAGGGAAGAAGATCATCAACACACAACACAATTAC
AAGATGAACAAGGATGGAATCATTTCATCAAAGACAAACAGCGAGACAGG
GCAAGTAAAAAGAAAGAGAAAGAAAAGAGAGGAAAGATTTTAACGATTAT
TTTTCGTCAAAAATTTTAAGATGAAGAATAAATTCAGGTTACAAATTTTC
TATGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGGACGACAAATA
CAGTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACCTACATGAAAA
TGCAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTCGAACGATCAT
CAATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTTGTGAATTGAA
TCAACATAGGGAAGAAGATCATCAACACACAACACAATTACAAGATGAAC
AAGGATGGAATCATTTCATCAAAGACAAACAGAAAACTGTCAACACAAAT
GACATCCTAATGCCCACAGAAAACTGTCAACACAAATGACATCCTAATGC
CCACAGTCTTCCGACCACGTCAAAACCACCACCTTGTGAAAAAATTCGTT
TATCATAACATTTGGGAATTATCTTTCGATTTTAAACTCTTTGAAGAAGT
TCCCCATTGGGTAAACATCGTCTCGTTCCAAAAAGTTGGTACGACATATT
ACACACAGTATGGTAATCGAATTCCATCTATTTGGACATTTGGAAGAAAA
ATGTATTTCTTCTATCCAGATGATACTAACCCAAACCAAGATTGGAACCT
TGACCTGAATCTACAACAGACATATTCTTTCAAGATGAGACAAACAACAC
ATACAACGAACGAGAATATCAAACACATTGCCATTTATGTGAATAGAGAA
AGAGTTCACTACCGAAAGTTCACCTTAAATTTGAGTGTTGACTTTGTTGA
ATGCTTCCTGACAGGTATCTTATGGAACTTCAGATACACACAAAGTCCGA
TATATCCCGTCTTCCGACCACGTCAAAACCACCACCTTGTGAAAAAATTC
GTTTATCATAACATTTGGGAATTATCTTTCGATTTTAAACTCTTTGAAGA
AGTTCCCCATTGGGTAAACATCGTCTCGTTCCAAAAAGTTGGTACGACAT
ATTACACACAGTATGGTAATCGAATTCCATCTATTTGGACATTTGGAAGA
AAAATGTATTTCTTCTATCCAGATGATACTAACCCAAACCAAGATTGGAA
CCTTGACCTGAATCTACAACAGACATATTCTTTCAAGATGAGACAAACAA
CACATACAACGAACGAGAATATCAAACACATTGCCATTTATGTGAATAGA
GAAAGAGTTCACTACCGAAAGTTCACCTTAAATTTGAGTGTTGACTTTGT
TGAATGCTTCCTGACAGGTATCTTATGGAACTTCAGATACACACAAAGTC
CGATATATCCCGGTCAAAGAATTTATGTACCACGCGAAGAAGAGCTTTTC
AAAGAGATCAATAATTGGCCGCCAAAGGAATGGTTTGTATCTTTTGATTA
CCAATTAACGTACAGTGCCCAACCAAACTATTGGCTTTTCATTCTTATGT
TTTCTGGTGGAATAAACCAAGAAACAAACAATCGTGAAAAAAACTTCGTG
AGAATTCAAAGACCGTCCAACGCACTTGCATTGAATGTCAGAACATGGAC
ATCGACAAGTGGGGCACAACTATTAACACATCATGATCTAACAAACTCAC
TCAACACTTACATCAAATGTCAGATGCAACAGCAACGCGATCCAACTGAT
GGCAAACTTTACGTCACATTTTGGGTGGACGGACAACTAAAAGGGACACG
AGTTCTCAATGAGAACCATCAAACATTTCAGAAAGTACGAATCACCTCCG
GATATTCAAATTTACCACATGGAGTTGAATGGATTGACAATTTAAAATAT
GGTGAGCTTTGAGTCAAAGAATTTATGTACCACGCGAAGAAGAGCTTTTC
AAAGAGATCAATAATTGGCCGCCAAAGGAATGGTTTGTATCTTTTGATTA
CCAATTAACGTACAGTGCCCAACCAAACTATTGGCTTTTCATTCTTATGT
TTTCTGGTGGAATAAACCAAGAAACAAACAATCGTGAAAAAAACTTCGTG
AGAATTCAAAGACCGTCCAACGCACTTGCATTGAATGTCAGAACATGGAC
ATCGACAAGTGGGGCACAACTATTAACACATCATGATCTAACAAACTCAC
TCAACACTTACATCAAATGTCAGATGCAACAGCAACGCGATCCAACTGAT
GGCAAACTTTACGTCACATTTTGGGTGGACGGACAACTAAAAGGGACACG
AGTTCTCAATGAGAACCATCAAACATTTCAGAAAGTACGAATCACCTCCG
GATATTCAAATTTACCACATGGAGTTGAATGGATTGACAATTTAAAATAT
GGTGAGCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000306_pilon | genome | sc0000306_pilon:184078..189353 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 883-1380:499 |
| Aaloc | 430-879:3325 |
| Aaloc | 391-426:3931 |
| Aaloc | 70-390:5207 |
| Aaloc | 1-69:5277 |
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