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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000306_pilon:200974..205357+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_014078 ID=XLOC_014078|Name=XLOC_014078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4384bp|location=Sequence derived from alignment at sc0000306_pilon:200974..205357+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTTACCGTATCTGATTGGGATGTTGTATCTCGTTGGTGTCATCAG
AGGAGGTTGCCCGTAAGTACTTTTATCAATtacttgatttttcttttctg
ttgTGAATGTACTAGTTAAGGAACCAACGCCTGATTCTAAATGAAACATG
CAAATAATGCGTTAATACTGCCCCTTCTCTACGAAGTTTTCTCTGAAATT
TTCGAAGTTTCTTTTTCCACTTTCCTCTTTTATACTTTCCACTTATTATA
TTGAAACACTGCATCTAATCTGAAGTTCCTTGACCTGATTTGCTTAGTAC
ACCAAGTGTTTCAAGATGTTAAATTATTGTATTTCTTTTTGAGCTGATCA
TCAACTGCTTTGAAAGGCAAATTATGAGGCTCCTTGAAAATCTCGAAAAG
TTCTTTcgaaaaggtttgtttttctttcaataaacaGCACCACTGAAAAT
GCCATTAAGATGGCCGACATCAAAGACGCAGCTGAAGTCTCAAAATTCAT
TTACGACGACAGCGTATGTAAAGAGAATGCGATGGTACCGAACACAGaat
tcaaaatcatcaaaaccatCCATGAGAATCTACAATCAGATGGTGAAGGC
ATTCGATCAGTCATTGCTGATGGTCCTCATAATACACGGATATTGGCCTT
CAGAGGAACTGATGGGTATGATACTGTGAAACTTAAACAGTTTTCCTAAG
GTTGTCTGAATGGATGATATGTTATAGTGGTTTCTTGAATTCTCTAGTCT
GTGAAAGTAAAGACTTGATGAACAATTTAAGAGTTTTATAAAGTGATACA
CCTTTTTCTACTTGCCAACTCATAGTGATTGCTAAATTATTGCATTACGA
TTTTTGCGATTTACATTAAAGTCTGTCACAAAAATATGCTGACCTTTTac
ctttttaacaatttctcaGTATGCATTTACACCGTTAGaccgaaaaataa
caaaagttaACCACTTCATAGTACtgtaacatttcaaaaatcttttcgac
tattctccttgaaaatatctttccagcaGTGTATAGTATTAATATGTACt
gagaaattatcaaaaaggtTCACGTACCTTTGATACAAACTTAAGTCTTA
CTTTTTATATTATCGCACACACTATATCTACTTTTTTAGGACTGAACAAT
TGATGTTGCAAGTCGTAGATGCGTTGAAATCCAAAATTAAGTTTATGGTT
GGTTCACAGGAGACATGGGTTCTTCAATTCTTTCACAACGCTTTCAAATT
GATGTTCTATGGTAAAAAGCCTTACATGACCGATCCAAAGAAGAGATATA
TCATCACTGGACATTCATTAGGTGGTGCATTAGCATCGATGTTGGCTTTG
CAAATGACACAAGAATTCAGTGTAAGAGATTTTGGTTTTTACCTTCCTAT
TTTTCCTGTAATATATATTTGTCGATTTGATggggggggCTATGAGACtt
tttgattgggatttttgttttgttttttggaaaCTGTGCACGATCTTCTC
GGGTGAATTTTTTGCTTTCGCTCACTTATAAACCCTGGactaatccgcca
tctttgaagtagttttttttggaaatgtacCTGCAACAAAAGTATCTAAA
GAAAGATTGATCTAGCTCTCTCGATGCATTCACATCACTATTTAATAGTT
GCTGTCAATAccgctttcaaaaaaactcagaTTAAAGATTTTGGTTGGCT
AGAAATGAATAAGAAAACTCTCTATAGAGTCAAAGGCTCAGTGCTTTCAC
TACAGTATACAGGGTGTacggaaaaaagtatcgagttcgaacatgattct
gagtagaaggttgttccgtgtgtttaacaaaatatttaagaaaatatata
ccaacacaataattTAACGTTGAGAACATCGCTTGcctgaaattattgcc
atggtgattaactcccagtggaattaaaactactttctattcataaagaa
aatcatttaatgtctcaagggacataatcaccatggtaattgtttgaata
cgaggcaagtgatgttcattcgtgacgtaatttatgaaaaggtctattga
atatATTCAGATGCTTCTCGTCAAGTATAATACTAGATATGATTATTAAT
TGTAGGGAAGTATATGGAAACACCCGAAATCGTGTTTGATCACCTTTGGA
CAGCCTCGTGTTGGAAACCAAGATTACGCGGACGTTCATGACAaattgat
tccaacattccgCAAACTTCGTATCGTTTACAAAGCTGATTTGGTTACAA
TAATTCCTCCAAAAATTTTAGGATTTGTTCATCATTCAAGGTATGTATTA
GTGAGGTTTGTTAGctcataaaaacgtaagaatacttcagatggtgataa
aagcatgacaTTTGGCACatatgatccttagagggtctaaaacttaattt
taaacagtaacaacAAATTTTGCCACCGGGCCACCtgtcagatgacgtca
tcaggtggctgggcaaaaaaatatttttttgaaaatgttcaaaacctgat
ggttccagcggaaaaagcatgaaatgctgatgaaaatcgaggtataaaac
atgccttgaaaatcttcctatcaaaagttatGAAGGTTGAAAGTTTTGTG
ATGACGTCATCATAAGCCTTAAAACATCCAAAAAATTAGTCAGTTGTACA
CTGTGTTTCTGAAGGGGAGAACGCTGCGTTGATTTGCCTTATAAATCTCA
AAATCTAAGTTTTAGTGTTCTGTAGGATTTAAAGCTTTTAATATAATTTG
AACATCAGAATCAGAAAAAGCAACGAAATTTGATATGTATAAAACATCAA
ATTTGGTCAATTTGTTCCAAAATTACGAGGTTTTTAAGTTTTGTCTGGAA
AGGCTTATGATGACGTCATAACAAAACTTTCAACCTTTataacttttgat
aggaagattttcaaggcatgttttatacctcgattttcatcagcatttca
tgctctttccgctggaaccatcagattttgaagattttcaaaaaaataaa
tttttgcccagccacctgatgatgTCATCTGGCTGGTGACCATGTGGAAa
catttggtgttactgtttaaaattaagttttagatcCTCTAAGGATCATT
TGTGCCaattttcatgcttttatcaccatctgaagtatttttgtgctaac
agacctcactatatggcaaaatttttttttgtctttcggGTTAACTCCAG
AAAAAGTGAGAGAGGGGTATATtgaatatgtaatagttatcggacaattg
caagtacaatatgagaaataaattacgagttccgagatttttccatacaa
tattttccgagcctttagacgaaaaatccggaacgagtgaaatatttcca
tattgtacgagcgaAGGCTtgataaaattatttaaaaaaaacgctgagtt
ttgttgtttttttattgtttttgtgacgtcaattCTGGTTTGGAGTTCGA
AAAAGAAGACGCTATAATGTCTTAACGTCAGAAAATCGTTTTCTCTTTCG
AATCTTTTAAACCAATTAAAACCCGTGGTGACGTCAGCGAATATACCATG
GAACTGGAACAAATCTTGAGACCCCCTATTTAGCTTTCGTCATTCtcttt
aaccaatcagattgcagatattttttggatcgccgataatatATAGAATA
TTATTTTTCACTGATTACCCCTGCACTTAAAGACCATACTCAGACGTTAT
GGTTTCGTATCGCCCCGGTGCGTCATTTGTTATGGATTGGAAGTGTTCAT
ACtcatttcggaacgtttcggagcgaaaaaacgaagcagttccgttccga
tgaaagtAGTGGAGCGAAACTGTTTCGACATGTTTTGcattgtaacgtct
tctttttttgacgtttccaattttgacgttcacacagtgtttcggggccg
tttcattttcaaatttcctcaaaaaatgTGACTTTCTTTTAAGGTCTGAG
ACAAAAGTGATCAGGTGTTtgtcttttgaaatattctttcattcCCGATC
ATGGTAATATGGTCAATGTATGTGTTGATGTAGACAATATTATGTTTTAG
AGCGGTTTTCATGGGCGACGAGACATACTGGTCATGGACATGGGGTAAAC
GTCGCCGACGTTCATTGAAGCATGACGTGCGTCACAGTAATACAACAACT
GATGTCGGGGAGAAACGATTATTAACAACACGAAGATATTGGCAAGTATG
CAAAGAACAAGAAGATTCTATTTGTCTTACAAGTTTGAAGAATTTCTATC
CAAATACTGGTGATCATGATATGAAACATTATGTTTATGAAAGCGAACAT
AAACCTGATCGGTTTTACTCAAGGAAAGAAACTGTTAGAGGTAGTTTTGA
AGAAGTTCTAATTGATACTTGTCATGGTAGATAG Coding sequence (CDS) from alignment at sc0000306_pilon:200974..205357+ >XLOC_014078 ID=XLOC_014078|Name=XLOC_014078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2082bp|location=Sequence derived from alignment at sc0000306_pilon:200974..205357+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTTACCGTATCTGATTGGGATGTTGTATCTCGTTGGTGTCATCAG
AGGAGGTTGCCCATGTTTTTACCGTATCTGATTGGGATGTTGTATCTCGT
TGGTGTCATCAGAGGAGGTTGCCCCACCACTGAAAATGCCATTAAGATGG
CCGACATCAAAGACGCAGCTGAAGTCTCAAAATTCATTTACGACGACAGC
GTATGTAAAGAGAATGCGATGGTACCGAACACAGaattcaaaatcatcaa
aaccatCCATGAGAATCTACAATCAGATGGTGAAGGCATTCGATCAGTCA
TTGCTGATGGTCCTCATAATACACGGATATTGGCCTTCAGAGGAACTGAT
GGCACCACTGAAAATGCCATTAAGATGGCCGACATCAAAGACGCAGCTGA
AGTCTCAAAATTCATTTACGACGACAGCGTATGTAAAGAGAATGCGATGG
TACCGAACACAGaattcaaaatcatcaaaaccatCCATGAGAATCTACAA
TCAGATGGTGAAGGCATTCGATCAGTCATTGCTGATGGTCCTCATAATAC
ACGGATATTGGCCTTCAGAGGAACTGATGGGACTGAACAATTGATGTTGC
AAGTCGTAGATGCGTTGAAATCCAAAATTAAGTTTATGGTTGGTTCACAG
GAGACATGGGTTCTTCAATTCTTTCACAACGCTTTCAAATTGATGTTCTA
TGGTAAAAAGCCTTACATGACCGATCCAAAGAAGAGATATATCATCACTG
GACATTCATTAGGTGGTGCATTAGCATCGATGTTGGCTTTGCAAATGACA
CAAGAATTCAGTGACTGAACAATTGATGTTGCAAGTCGTAGATGCGTTGA
AATCCAAAATTAAGTTTATGGTTGGTTCACAGGAGACATGGGTTCTTCAA
TTCTTTCACAACGCTTTCAAATTGATGTTCTATGGTAAAAAGCCTTACAT
GACCGATCCAAAGAAGAGATATATCATCACTGGACATTCATTAGGTGGTG
CATTAGCATCGATGTTGGCTTTGCAAATGACACAAGAATTCAGTGGAAGT
ATATGGAAACACCCGAAATCGTGTTTGATCACCTTTGGACAGCCTCGTGT
TGGAAACCAAGATTACGCGGACGTTCATGACAaattgattccaacattcc
gCAAACTTCGTATCGTTTACAAAGCTGATTTGGTTACAATAATTCCTCCA
AAAATTTTAGGATTTGTTCATCATTCAAGGGAAGTATATGGAAACACCCG
AAATCGTGTTTGATCACCTTTGGACAGCCTCGTGTTGGAAACCAAGATTA
CGCGGACGTTCATGACAaattgattccaacattccgCAAACTTCGTATCG
TTTACAAAGCTGATTTGGTTACAATAATTCCTCCAAAAATTTTAGGATTT
GTTCATCATTCAAGAGCGGTTTTCATGGGCGACGAGACATACTGGTCATG
GACATGGGGTAAACGTCGCCGACGTTCATTGAAGCATGACGTGCGTCACA
GTAATACAACAACTGATGTCGGGGAGAAACGATTATTAACAACACGAAGA
TATTGGCAAGTATGCAAAGAACAAGAAGATTCTATTTGTCTTACAAGTTT
GAAGAATTTCTATCCAAATACTGGTGATCATGATATGAAACATTATGTTT
ATGAAAGCGAACATAAACCTGATCGGTTTTACTCAAGGAAAGAAACTGTT
AGAGGTAGTTTTGAAGAAGTTCTAATTGATACTTGTCATGGTAGATAGAG
CGGTTTTCATGGGCGACGAGACATACTGGTCATGGACATGGGGTAAACGT
CGCCGACGTTCATTGAAGCATGACGTGCGTCACAGTAATACAACAACTGA
TGTCGGGGAGAAACGATTATTAACAACACGAAGATATTGGCAAGTATGCA
AAGAACAAGAAGATTCTATTTGTCTTACAAGTTTGAAGAATTTCTATCCA
AATACTGGTGATCATGATATGAAACATTATGTTTATGAAAGCGAACATAA
ACCTGATCGGTTTTACTCAAGGAAAGAAACTGTTAGAGGTAGTTTTGAAG
AAGTTCTAATTGATACTTGTCATGGTAGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000306_pilon | genome | sc0000306_pilon:200974..205357 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 709-1041:4052 |
| Aaloc | 523-705:2106 |
| Aaloc | 292-522:1141 |
| Aaloc | 64-288:439 |
| Aaloc | 1-60:1 |
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