|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1458457..1461843- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013858 ID=XLOC_013858|Name=XLOC_013858|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3387bp|location=Sequence derived from alignment at sc0000049_pilon:1458457..1461843- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACACTATCTGAACTTCACAGTGCTGTTATTAGCCTTGGCATCGAT
CTCTGCAGTACCGTTGATTCTACCAGGGGTCGTTGATCCGCAGACATCGA
GTTTATTCAACAAGTTGGTGACAAAGAATAATTTTGATACTTTCACCAAA
AAAAAACCGATAATGGTGATTATGTTCTTCAAGTCCTGGTAAGCCCATAA
ACCACAGTTTAGATTTACCAGTATGGACAAGCAGAGTGTTGGTAACAATT
TTTTCGTGCCTGATTTTCACTTACAGCTAAACTTTTCAAGAATTATGACC
TTTTTAAATGCTCAAGTTTTGTGCTTGGTTTTGTTGTATCAAGAGGGTCA
TTGGCGACAATGCACAGCATGTAAAATTCTCAAAAAATAAAAATCTTTTT
TTTGAAAATTGTAAAGTTTGCAATAAAGTTTTTTGAGAAAAATCTTTTGA
GAGATGCCACCCACTGAATCCTAAAAGAAATCCACCGTACATGGTATTAT
CGTGTCAGATAGCTTACAAAATTCAAACACTTATTTCGATGGTCGCTTTT
ACTTTTCGATGGTCGGTTTTGCTTGTCGAAGGCCACTCTTACTTTGTCGA
TGGTCAAATTCTATAAGTCAATGGTCGAAAAAAGAATCATTGATTGATCG
AAAAAAAGCATTGAGAAAGCCAAGGGCTGAACAAATTTGAATAAGGTGAT
AAAAAAGTCAATTGGTCAATCTGTCCTACGACATGACCGCACGACTATCT
GACTCCATACCATTCCCTCATCTACAGAATCCACAATGGGGCAAAATCAA
GTACAAAATTCGATCCTTGATTCTATTCGTTTATTGGTTGCAGGTGTCCT
TATGTAAAAAGATTCCTTCCCGAATGGAAGAAAGCAACAGAGACGTTAGA
GAAACAAGGAAAATACATCTTAGCCCGATCGGATTGTGATGGCACAGGCA
AAACATTATGTGATCATCGTGATATCCAAGTCAAGCAAGTTCCAACTGTT
TTGTTATTCAAAAACGGAAAACGAGTTTCCGACGTGTATTGCGGAACAAA
AGATGCGGGTAAGATATTTTACAGCAAAAGTTCGGGGTTTCTGACTAGGT
AGAACGTCCAAGGATATCAGCAACAAATATCTTTCTACTGGCAAACATAA
AGTTCTATGTTTAGCATTGACTGTCACATTAACTCTCACATAAACTAGCC
ATAGCTTTCACTAACTGCCACCCGCTAGTACAAATGCTTGTAAAAACTAA
TTAATGCTAATTAAGGCTTTTTAATGCTTTAAAGCAAAAGTTTGGAAATT
ATTTGGAATAGTTAGAACAATCCGTTGGTTAGAATGATTCTTCTCTACAG
AATTTTTTGAGATATCAATGAATAAGCTAACATAAATGAAACATATTTTT
TTTCTAAAAATGTGAATTACTTTTTACAAAGAATAAAATGCAAATCTTAA
AACATTCATTAGGAAAAGTGTCCAGGTAGAATCAATTACAGATACTAAAC
CAGTCAAAAGACATGCAACTATATTTATTTCAACCAATTTGAAATATAAA
TGAAACATAGTAGAACTAAACAGCATAAGAAATGCTATGAGTCAGAAACA
TAACGAGCAGGAACCAAAAATTGACAGGTAACAACGTACTTAGGAGTTTT
TCCAACGGTTTAACAAAGGATATCGTGATCCAAAATTGTTTACATTAAAT
GGATTTACCAGTATTCTAGAAGCTGTAACGGCGTCGTGTAAAGGGTGGAA
GATGATAGGACGTAAAGTGGTAATAGTATCAGTAACAAGGCAATATTGAT
GAGCAGGAAGCAGGTATAAACAGGAAATAGCGTACATTCAGGACTTTTTC
CAACGGCATGATAAGGGATCTCATGGCCAAAATTGTCTACATTAAAAAGA
TATGCCAGTTATCTTGCAGTTGTAACACAGCAATATCGTGTAGAAGGATG
GAAAATCATGACGTAACGTGGTAATAGTAGCAGTAACGAGGTAATATTGC
GTTGTCAAGGTAAACGAATCCACATTCATAAAATAAGCTTAAATGGAAAA
TAAGAAACATGAAATTTATTAGATTCAATATAATGAGTGTACTGAAATTT
CCTCAAAATAGTATATACACAAAAAGTTCTTTCAATTTCCGATAATAATT
TCCCAAATAGTGCCGGTAAGTGTCAACAAGAACAAACGCTTAACATAAAA
CTGCATAATAGATCTATTATAAAAGCAAGCACACTTAATGAAAAAAAAAT
GTACTTACTGTCAAAGTACTATAATACAGGATCTTTATGTATTCTTGTTG
GGAGTAGAGTCTGCTGAATGACGATTGTTGAATTATTTAGTTACAGCGAA
TTCAATTTCCAACAATAATCACTTTTGTCCATATTCATTCATTGTATTGT
TCTACTACTATTATCTATTATCATTTTAATCATTGTTCATTATTGTTCTG
TGGTAAAAATTAAACATCAATCCGTTCACATTATTGTAATCACTAAGAAC
TTGGAAGTAATAAATGTAAATTCAAATCAATAAAATAAAATTTGTACAAA
ATCATAAAGTATCTCACAGTCACAAATAATGAGTCTTGACTGCAGACTAT
AGAGACTACTTGTTTTTTAATTCTTCCAGAAATTTCCACGCACCTATATC
TTCTTCCTTTCCTGAATGTTAACCAATCGGACAAATTTTATATATAAGCG
GATAGGAAGAAATGAAAACCCGCCCTAAAAAGGAGTGTAAAATTCCCGCG
GCGCTTGACGTAAAAAATAAAAGCCGTCCTAGAAAAAAACAAACAATACC
GACCATTCACGGAAAAGACTAACTACGGATAGGCTTGCGCGACAACAACA
ACAAAACAAAAATCCGAGATTCCAGTCCAACAATCCTTGCGCCTGAAGCT
ATGAGTGCCTCCTCACTCGCTGACGCTCGTTGCGGGGGCAATAAGAATTC
TTGATATGCGTAAATTTGATTACGTAAAGATTTTAACCATATATGGTAAA
AAGATCACGTCATGGGGGCCCAAATCAATTTTTTTGCCAAATATAGTTAA
AAATTACGTCATCACGGGGGTCAAATCATTACGTAATTCAACTTACGCAT
ATCAAGAATCATAAAAAAAAATTGTCAAGTGCATTTGATCCTTTATCACA
TGTGTATTCCTTACAGAGGGAAAAGACTTAGATATTTGCCTGGGTTTATT
TTTCCTGATTTTTCTGATATATCTTTCAGTTTTCAGTGCAGCTTCCGTTC
TGAAATCTGTTGACGAAGCTAAACGAACAGACGACATCACAGGCGTTTGT
ACTGCAATCAAACTTCCTGCCCCTACCACTACTACCGTGCAACCAAAACC
AAACCAAGGGCAAAATCATCTGTCTGTCACAATTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:1458457..1461843- >XLOC_013858 ID=XLOC_013858|Name=XLOC_013858|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1122bp|location=Sequence derived from alignment at sc0000049_pilon:1458457..1461843- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACACTATCTGAACTTCACAGTGCTGTTATTAGCCTTGGCATCGAT
CTCTGCAGTACCGTTGATTCTACCAGGGGTCGTTGATCCGCAGACATCGA
GTTTATTCAACAAGTTGGTGACAAAGAATAATTTTGATACTTTCACCAAA
AAAAAACCGATAATGGTGATTATGTTCTTCAAGTCCTGATGAAACACTAT
CTGAACTTCACAGTGCTGTTATTAGCCTTGGCATCGATCTCTGCAGTACC
GTTGATTCTACCAGGGGTCGTTGATCCGCAGACATCGAGTTTATTCAACA
AGTTGGTGACAAAGAATAATTTTGATACTTTCACCAAAAAAAAACCGATA
ATGGTGATTATGTTCTTCAAGTCCTGGTGTCCTTATGTAAAAAGATTCCT
TCCCGAATGGAAGAAAGCAACAGAGACGTTAGAGAAACAAGGAAAATACA
TCTTAGCCCGATCGGATTGTGATGGCACAGGCAAAACATTATGTGATCAT
CGTGATATCCAAGTCAAGCAAGTTCCAACTGTTTTGTTATTCAAAAACGG
AAAACGAGTTTCCGACGTGTATTGCGGAACAAAAGATGCGGGTGTCCTTA
TGTAAAAAGATTCCTTCCCGAATGGAAGAAAGCAACAGAGACGTTAGAGA
AACAAGGAAAATACATCTTAGCCCGATCGGATTGTGATGGCACAGGCAAA
ACATTATGTGATCATCGTGATATCCAAGTCAAGCAAGTTCCAACTGTTTT
GTTATTCAAAAACGGAAAACGAGTTTCCGACGTGTATTGCGGAACAAAAG
ATGCGGTTTTCAGTGCAGCTTCCGTTCTGAAATCTGTTGACGAAGCTAAA
CGAACAGACGACATCACAGGCGTTTGTACTGCAATCAAACTTCCTGCCCC
TACCACTACTACCGTGCAACCAAAACCAAACCAAGGGCAAAATCATCTGT
CTGTCACAATTTAATTTTCAGTGCAGCTTCCGTTCTGAAATCTGTTGACG
AAGCTAAACGAACAGACGACATCACAGGCGTTTGTACTGCAATCAAACTT
CCTGCCCCTACCACTACTACCGTGCAACCAAAACCAAACCAAGGGCAAAA
TCATCTGTCTGTCACAATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1458457..1461843 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-561:157 |
| Aaloc | 190-402:2544 |
| Aaloc | 1-186:3388 |
|
