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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:447045..451343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013765 ID=XLOC_013765|Name=XLOC_013765|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4299bp|location=Sequence derived from alignment at sc0000182_pilon:447045..451343+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCGCTGGATTAGAAGAAAAACGGCAAATAGTAAAAAGAAgtacaa
acacaaaacaaatacACCGAATATCTTTCCATGGATTTTGTTATTAATCC
TGATTGGATGGACCCTTTGgggtaaagatttttttttaagactttaaaac
catttttcaaaattcaacctCTTAATTTCAAGTTGTTCAATTGACCTATC
AACCCTTCCTTAGTGGCGTGGTCGGCTTTTTAGGGAGTTGggaacaaatt
taaaaagaacaattattCTCGGCGCGCGAAATTTTTAGGCTACAACCAAA
TCAAACTTATAAAATTCCGGCCCAAGCTCTAGAGACATTTTCTCGAGTCT
TTGCGGTGGAGTGCAAAGTATTTATAGCATTCGAATAGCTTTACTATATC
GACTTGATCACTTAAATGCAAGggtatcttacatttttcacaagagcACT
CCTACACTTGTGTTTTCGATACCGTCGTTTAGAGCAAAATAATTAGAATT
TctgggcaaaaatttgcaactttTTCTGGATTTGCTGAAGTtttcaccct
tacagtgtatttatTATAAAGTAAACCCTTAAAATGCATTTCTGCTATCT
TGTGTTTAGTGCTCACTGGTCCCGTACTTCTTAACTGAATCAGGCTTCCA
ATATAATAAAAAGTGTGTCCGGTTTAAGGGTAGGGTActgacatccacta
acggattcgtgctcttTGTAGACTAGTTCACCATTATGTTTACTCCCGGA
TGAGTATTAAGAGTACTAGGGTTAGAGGGTGGTAGGTATGTATGGATTTG
ATAAAGCCCTGACCCTTAGAGAGGGACTAAATTTCCGTCGAAACCCTCGA
AAAGCGACTATCAGATGTTCGATTTCCAATATTCTTAATAGAAGAAATTG
TTATTTCTTTTTAGCCATTTGGCATTTCTCAAGAAGTGTCATTGTGCCAT
CTTTGATCAAACGAGTGACTCCTCgaaaagagaagagtttccaggaagat
tttaaagaagaaaacgaagaagaagccTTAATGATGATCGatgaagatga
aatttttcgaaaagaaatgGATCTTATCTCAGGGTATATTTACTTTCCTT
CTTACTAACtgcattattttttttcattctataGCAACATATTTCACAGg
cctattgacctctatgatacagaatttttgatttttcattgtATAAAGTT
TTTCCTcccattcttttatcaaacgctctttgaagacttgtaaggatggt
gcttcaacaatatcttcttctagagatcattccaaggtttacacttctgt
aaaaaaaggGTCCATTTGTTTCAGCACCATTTATGCCACTTATGCCACCT
TTTTCCCATTTGTTTCACCAAAATGGgttcaaaagtgttaaaaaaaatat
ttacatttttaccaCCTTGATTTACATTGATCATTTGTGTTCTTTGTGTC
AAAAGTGGAAGTTtgccaagcttttccaagcaaaaagaaattcgcaTTTG
TTTCTGCATTCTGGGTCAAAAGTTGAAGAATGTTATTGTAAATGGCGGCA
ATAATCGAATGCATAATTACGAtgcgtttcactttcgttttcttgttagt
ttgtttacatttccgACATAATTTATGCGGCCATTATTGACGTAACTAAG
AGTTCGCAAAATGGTAGACTTttgcatttttaacacggttTCCATTTGTT
TCACACGATGGTGGCATTTGGGGAAAAGATGGCAAAAATGGAAGTTTTGA
GGTAAGAAACAAATGGACCCAAAGAGAGTTGTTTTGGTAGTTGCTTTCAT
ACTgtaattagcaaagttcctttgaagctcgtaatcatgctgacgtaGAT
ACATGTCATTCAACAGGGGGCAACCATTCATACAACATCAATATATTGTA
TAAAGGGGTTCCACGGCGTAGAAAGTCAGGGATCACTTTGTGATATGGAA
TAAATAAAAGTGATAGATGGagtgaaattaattttgataatGTCCAGTTA
ATGATgatagatgaacgttgaaaaaacatTGTGTTCTAGATGTGCTATCA
TGGCAACCAGATAAGAATAACAAGGGATTATTGGGAATAATTCAAAGACA
TGGTCAAACGAGAGGCTGAGCTTTAAATTGGCTGATAAATATAACTCCAA
GGGCTCTTAAATCGAGTAAACACTATAAAATTTTACATATAAACTGTTAC
TGTCGAACCCTTACAGCTCAAACCTCCATCACAGACTTcttaagcccgaa
gggctaagtAGAGTGCTTTGGCTGGAAAgcgtgccgaggttaggtaggag
aTCCTATCTAGGTTACACGCTTGACAAATCAGAAGCGTcacggattttcg
aaaacaatagcaacaataacttttgcgatattcacttttggaaaagttcg
aagcactctatctagcccttcgggctttacagaaatcagTGACCTCTACA
CGCCAAAAGTCTTCAGCGTTTGAACGAGCCAGCCCTTTGGCCGTTCGAGA
TATGGAGAAAACGATAACATTCAAAATATTCCATACCCTAAATAACCGTA
AAATTATCCTTCTAGCTCAACTTGCAAAAATGGACCTTCGGGTGTACTAC
TTTTAAAAACGCATAAAACAGGAAGTAGTACACTGGCTAATATACTCAAC
CGTTATGCTGATCAAAACAATCTACTGATGGCCATCCCTCATCGCAATTC
GCGATTTGATTGGCCGCACATGTTTAATGTGAAATCAGTTGATCAGAAGT
TAATGAACAATAGACGAGCACAAGTTTTAACCAATCATGCGAGGTAAATT
CTCCTAATATCATTAatataatacgcttaaatcggaactctcccattctc
gcgtagtttttcgctagcgattttgaAGCAGACAGCAATTcattttcgcg
ccttttctgttttgatctttcaatacagtaaaaaataattttcttaaagt
tAACTAGAAATCCTCACTTCCAGATAAATTATTCCTGTTTTAAGGTTAGT
TATTTATTCCGTGAGACAAGATATTGTTTTCCTGAAACTAGATATTTATG
TAATCTAGATAATTTATATAGGGTTGTTAATCTCGTTATTAATATTATCA
TTGAAATGACGACCATCTTTTCAAAGGTGTTTGGCCCAAGCCAATAATAG
AGCTagatatttttgaataattcaGGCAAAAACATTACCTTAATGCAACG
TGTTTGGCGTATTTTGAGAACTAATTTAGGCCAATTTGGCccaaaatcgc
caaaattaaaaaactgtCACCCTTGAATCGGTTCCTTGCCTAAAATTAAG
CTTAtaatgattttctgaaaaataaccCCTAGTTTTTGTCAAAAACGCTC
ATTTCTATAAGCCCGCTATCCACCAAAATTAGCTCtggccaaaattagtt
cccttgaAATGAGATTATTCTAAACAGCTAAACCCGAGAGGAATGAGCAA
GAATTCTAAAATATCtcttacaaattttttttcaggctcAATCGCGTCGC
AATGGACGAAGTCATGGTGCCGCGAACCCTCTACATCAGCATTTTACGAG
ACCCGGTCAAGCAATTTGAAAGTTCTTTCTATTACCTAGAAATGCATACA
TTTTTCGGTCTAAAATTCTCCGAAAACCCATTACAAGACTTTATGCAAGA
CCCCAATAAACAcatgaataaattaaaaagccggcaaaaacctgaaaatt
atgGATTATTTAGAGACGGTATGTTATTCGATCTGGGTTATGATCAATTA
GAGCTGAAAAGAATTGGTGTACGAAAGGCAATAGAAATtctagaaaaaga
aataaatctaTTCCTTATTTTGGAATACTTCGATGAAAGTTTATTACTGC
TGAAAAAAGCAATGTGCTGGTCATTGGAAAATATCTtatatttcaaacaa
aatcaacGTACCACAAAAATCCCAATTAACACTGCAACAGCTTCAAAGAT
TCGTGAATGGAACAAAGCAGATGTGGTGCTATATGAACATTTCAATGCAA
CATTCTGGAGGAAAGTTAAAGACTATGGACCGacttttaaagaagattta
aaAGAATTACGTCATTATATTCATGAATGGTCGAAACGTTGTGATCGTCA
AGAAGTCGTTAAAGGCAAAGATGCAAGTGCTGTCAGATTTTATAAAGTTG
GACACAAAGCCAAGCCAGAACACCGAGAAATGTGTCAACGGTTTTTTCGT
AAAGAGCTAGAATACATTCAAGAGTTTAGGATGagttattttaaagaatt
tcacGATAAAATGcaaatatataataaatttaAAAGGTCCCCTACCTAA Coding sequence (CDS) from alignment at sc0000182_pilon:447045..451343+ >XLOC_013765 ID=XLOC_013765|Name=XLOC_013765|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2664bp|location=Sequence derived from alignment at sc0000182_pilon:447045..451343+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGCGCTGGATTAGAAGAAAAACGGCAAATAGTAAAAAGAAgtacaa
acacaaaacaaatacACCGAATATCTTTCCATGGATTTTGTTATTAATCC
TGATTGGATGGACCCTTTGggATGGCGCGCTGGATTAGAAGAAAAACGGC
AAATAGTAAAAAGAAgtacaaacacaaaacaaatacACCGAATATCTTTC
CATGGATTTTGTTATTAATCCTGATTGGATGGACCCTTTGggCCATTTGG
CATTTCTCAAGAAGTGTCATTGTGCCATCTTTGATCAAACGAGTGACTCC
TCgaaaagagaagagtttccaggaagattttaaagaagaaaacgaagaag
aagccTTAATGATGATCGatgaagatgaaatttttcgaaaagaaatgGAT
CTTATCTCAGGCCATTTGGCATTTCTCAAGAAGTGTCATTGTGCCATCTT
TGATCAAACGAGTGACTCCTCgaaaagagaagagtttccaggaagatttt
aaagaagaaaacgaagaagaagccTTAATGATGATCGatgaagatgaaat
ttttcgaaaagaaatgGATCTTATCTCAGGCTCAACTTGCAAAAATGGAC
CTTCGGGTGTACTACTTTTAAAAACGCATAAAACAGGAAGTAGTACACTG
GCTAATATACTCAACCGTTATGCTGATCAAAACAATCTACTGATGGCCAT
CCCTCATCGCAATTCGCGATTTGATTGGCCGCACATGTTTAATGTGAAAT
CAGTTGATCAGAAGTTAATGAACAATAGACGAGCACAAGTTTTAACCAAT
CATGCGAGCTCAACTTGCAAAAATGGACCTTCGGGTGTACTACTTTTAAA
AACGCATAAAACAGGAAGTAGTACACTGGCTAATATACTCAACCGTTATG
CTGATCAAAACAATCTACTGATGGCCATCCCTCATCGCAATTCGCGATTT
GATTGGCCGCACATGTTTAATGTGAAATCAGTTGATCAGAAGTTAATGAA
CAATAGACGAGCACAAGTTTTAACCAATCATGCGAGgctcAATCGCGTCG
CAATGGACGAAGTCATGGTGCCGCGAACCCTCTACATCAGCATTTTACGA
GACCCGGTCAAGCAATTTGAAAGTTCTTTCTATTACCTAGAAATGCATAC
ATTTTTCGGTCTAAAATTCTCCGAAAACCCATTACAAGACTTTATGCAAG
ACCCCAATAAACAcatgaataaattaaaaagccggcaaaaacctgaaaat
tatgGATTATTTAGAGACGGTATGTTATTCGATCTGGGTTATGATCAATT
AGAGCTGAAAAGAATTGGTGTACGAAAGGCAATAGAAATtctagaaaaag
aaataaatctaTTCCTTATTTTGGAATACTTCGATGAAAGTTTATTACTG
CTGAAAAAAGCAATGTGCTGGTCATTGGAAAATATCTtatatttcaaaca
aaatcaacGTACCACAAAAATCCCAATTAACACTGCAACAGCTTCAAAGA
TTCGTGAATGGAACAAAGCAGATGTGGTGCTATATGAACATTTCAATGCA
ACATTCTGGAGGAAAGTTAAAGACTATGGACCGacttttaaagaagattt
aaaAGAATTACGTCATTATATTCATGAATGGTCGAAACGTTGTGATCGTC
AAGAAGTCGTTAAAGGCAAAGATGCAAGTGCTGTCAGATTTTATAAAGTT
GGACACAAAGCCAAGCCAGAACACCGAGAAATGTGTCAACGGTTTTTTCG
TAAAGAGCTAGAATACATTCAAGAGTTTAGGATGagttattttaaagaat
ttcacGATAAAATGcaaatatataataaatttaAAAGGTCCCCTACCTAA
gctcAATCGCGTCGCAATGGACGAAGTCATGGTGCCGCGAACCCTCTACA
TCAGCATTTTACGAGACCCGGTCAAGCAATTTGAAAGTTCTTTCTATTAC
CTAGAAATGCATACATTTTTCGGTCTAAAATTCTCCGAAAACCCATTACA
AGACTTTATGCAAGACCCCAATAAACAcatgaataaattaaaaagccggc
aaaaacctgaaaattatgGATTATTTAGAGACGGTATGTTATTCGATCTG
GGTTATGATCAATTAGAGCTGAAAAGAATTGGTGTACGAAAGGCAATAGA
AATtctagaaaaagaaataaatctaTTCCTTATTTTGGAATACTTCGATG
AAAGTTTATTACTGCTGAAAAAAGCAATGTGCTGGTCATTGGAAAATATC
TtatatttcaaacaaaatcaacGTACCACAAAAATCCCAATTAACACTGC
AACAGCTTCAAAGATTCGTGAATGGAACAAAGCAGATGTGGTGCTATATG
AACATTTCAATGCAACATTCTGGAGGAAAGTTAAAGACTATGGACCGact
tttaaagaagatttaaaAGAATTACGTCATTATATTCATGAATGGTCGAA
ACGTTGTGATCGTCAAGAAGTCGTTAAAGGCAAAGATGCAAGTGCTGTCA
GATTTTATAAAGTTGGACACAAAGCCAAGCCAGAACACCGAGAAATGTGT
CAACGGTTTTTTCGTAAAGAGCTAGAATACATTCAAGAGTTTAGGATGag
ttattttaaagaatttcacGATAAAATGcaaatatataataaatttaAAA
GGTCCCCTACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:447045..451343 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-1332:3487 |
| Aaloc | 292-516:2567 |
| Aaloc | 124-288:917 |
| Aaloc | 1-120:1 |
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