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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:342317..345347+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013764 ID=XLOC_013764|Name=XLOC_013764|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3031bp|location=Sequence derived from alignment at sc0000182_pilon:342317..345347+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTAtccagaaatttcaaaagattggTTACATCGACGTGGCTTTac
caccaaaattttttttctacaaaattttGTGTTTGGGATGGAATATTCAT
TGACCTTTGTCACTTTGTACATTTATTTAAAAGACGTCTTAAAATCACAA
CACGTCGATTTTTTCTATAGTCTCATATCCGGCAGTTATTTGGGATTCAT
AGCGATAGCTGGGCTAATTATGAGTAAATTGTTCGACAATACACGACGAA
CCCGTCTCTTGTTTAtcattggaaatattttgacgTGTTTTGGAAACATC
CTTTATACAATCCCTTATTCGCCTTGGTTGCTGTTCGCTGGCCGCACCAT
ATCAGGTAGAAATATttataatcaaaaaaattataatttgggaccgccaa
agacgggggtaaatcGTGTGGAATCAATAAAAAATGTGATCTCAGGATCA
AGGCCTCCTAAAACCACGGGATAAGTTCTAAAAGTAATGTTATCATAAAA
TGAATGCCCAGTAAAGGTTTGGTGGCCATATAACttcaattttcatgaaa
ttatgagcaattttctaaaattcaaaatgacaGACGACCTAGCaacaaaa
aatggcttttagcAAGGTGAGCGCTTCGTCCAACCCCTAtgttgttatac
atttttgaaaccttttatCCAAAAGAAAAGTACGTTATTCAATTCTTTCT
TGGAAAAAGTCCTTTTTAAGGATCTTAGGCTTACTCCCCGGCATTAAGAC
AAAGATATcatgaaatttcaacctttttttcaCAAGATatataagaaaaa
gaaatatgttaTATTCATTCGCGCTCTGTTGGCTTTTTAAGCtcaaaagt
ttgaagatttttgagaaatcgcAAAGTTTGTCTACAAAACATCCACGATG
GTGtgtagaaatagaaagttctctCCATCCGTGGTGCTCCATTTTACAAT
CTCaccattctggtctgtaaaatgcataattttgaaaaaaaaaaaaaaaa
actttatctcAGGAACCTTCCTACCAAGTTTTAATGCTGTAGCattaata
gaaataaaaattattaataaaagcatttttaacataacccccggattttt
cgttttaaccatgattttttcaaaaaccttcAAGAATCGTCCgattttcg
atgaaaatttgtttcggccgaaaatcgccttttttgcagattttcattga
attttttcgtttaatatttttgtttaagaATGCCCACagttaagcatggt
tcaattttcaaggaAACTGACTTTGATAGCCGGACCTTTCTAAATATCGT
CAGAACAGCAGAgaatcgccggaaaaacggttttccATTCCGGAAAAATT
GGTTTATTAAGTGATTATAATTTGGATTTTGTAGATTTCGAATATTTATC
ATTTGTTaccctcattttctttttccttaCACCTTATATATCCcccaatc
aacaatcaatgttgaaatttaatgcgttatgctTTTTCGCTAacactata
ttttctgactgattgttgTCACATTTCTATacagctttcatcatcaggta
ggtccattcagcatacaTTCAACTTGTCAAATCAGGTTTTCACGCCGATT
CCGAAtctgaattttattttgtcATAGCTATTACGCTTGACCTTATATAG
AAGGCTTTATTTATTCagaaaatatcgcaaaaatggtacgaaatcaatat
ttttgaaaggagATTCCGGATTTCAAATTCGGAATTagcatgaaaaatta
atttaaaaaagatagttaAACATAGATATTTCCAAATAAAGTCAtttttg
gaccccccatgaatgaccaaaataaaaCAACTTTCCGGACTGACCGATCC
ACCTCAAAAATCTAGGGTCGATTGACGGCAAACCAAGAATTATCTTTTTA
AGTCCAGTcttattctcataaaaaaagtagTCTGACGCCTTTTAATTATT
ATCTTTTACAGGTTTAAGTGGATACATATCCCCTATCTTGACATCAGAGA
TTGCTCGTTCCTATCCACGAGATGAAGTTTTAGGGAAACTATCAACATTA
TGCTTTTCCTTCTCGCTGGGTTTGATAGGCGGTCCGTGTATCAATTTCGC
CTTTATACGAGCTGATTTTCGGTTATTTGGTGTTCATATTGGATATGCTA
ACGGTTCTGGTTTGGCTCTCACGATCATTTACTTTTCAATGATGATCTTA
TCGTTTTTTGTGAGTGATCTCTCAAGAGAGTTTGATTTGAAAGAAGCAAC
AAGGAATTACCATCAACATAACAAATCTTTGGAAATAGAGAAAGCAACAG
AGGTAGATTCATTTGAGAAAACTGATGAAGCATTGAAAGAAAGTGATGTT
CAGACATCAATACTGCCGACAAAGCTAGAGCCAGACCAAGAAGAACCTTT
ACTAAACACTATTGAGACAATCAAACAACTGTTAACTAATATAGATGCTA
TGATTTTATTGATGATTgcgtttttcttttcttactCAATTGTTACATTT
GAATCTTGGATCCCCATGACATGTGTTAATTTCCTGCACTGGAATTTGGC
TGAAATCAACGCAATTGTTTTGGCGACTGGTGCTGTTTGCAGCATAAGTC
TTTCAGGTTTCGCTGTTATTAACGTAAGTCACTTTGCTTTTCACCTATTG
GCTGTCTGCAGTTGCATATCATTGGCGTTTGTTTAcgtaatgtttttata
tttccaTTGGTACGGTGGTTTGATTTTCGCCGTCGATATAACGATTTGGA
TATGCTATACGTTCTGCTTTTCACTCCTCGCAATTGGCTTTGAAATGTTC
ACGTCGATAACATTAGCTTTGATGGTACCTTCAAGAGTACAAACTTCCGC
TGAAAGTATCCGACTAGCTTTTTCAAGTGGCGGTGCTTCAATTGGTATGT
TTACGGCTGCGTTCCTGTTTCACGTATTATCGTATTTCAACCCTATATGC
ATTGTTCTGTGCTTTGTTCTGTCTTCTATGTTAGTGTGGAGAcggaaatt
tttccaaaatccgAAAGAAATTTTACATTAG Coding sequence (CDS) from alignment at sc0000182_pilon:342317..345347+ >XLOC_013764 ID=XLOC_013764|Name=XLOC_013764|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2850bp|location=Sequence derived from alignment at sc0000182_pilon:342317..345347+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTTAtccagaaatttcaaaagattggTTACATCGACGTGGCTTTac
caccaaaattttttttctacaaaattttGTGTTTGGGATGGAATATTCAT
TGACCTTTGTCACTTTGTACATTTATTTAAAAGACGTCTTAAAATCACAA
CACGTCGATTTTTTCTATAGTCTCATATCCGGCAGTTATTTGGGATTCAT
AGCGATAGCTGGGCTAATTATGAGTAAATTGTTCGACAATACACGACGAA
CCCGTCTCTTGTTTAtcattggaaatattttgacgTGTTTTGGAAACATC
CTTTATACAATCCCTTATTCGCCTTGGTTGCTGTTCGCTGGCCGCACCAT
ATCAGATGAGTTAtccagaaatttcaaaagattggTTACATCGACGTGGC
TTTaccaccaaaattttttttctacaaaattttGTGTTTGGGATGGAATA
TTCATTGACCTTTGTCACTTTGTACATTTATTTAAAAGACGTCTTAAAAT
CACAACACGTCGATTTTTTCTATAGTCTCATATCCGGCAGTTATTTGGGA
TTCATAGCGATAGCTGGGCTAATTATGAGTAAATTGTTCGACAATACACG
ACGAACCCGTCTCTTGTTTAtcattggaaatattttgacgTGTTTTGGAA
ACATCCTTTATACAATCCCTTATTCGCCTTGGTTGCTGTTCGCTGGCCGC
ACCATATCAGGTTTAAGTGGATACATATCCCCTATCTTGACATCAGAGAT
TGCTCGTTCCTATCCACGAGATGAAGTTTTAGGGAAACTATCAACATTAT
GCTTTTCCTTCTCGCTGGGTTTGATAGGCGGTCCGTGTATCAATTTCGCC
TTTATACGAGCTGATTTTCGGTTATTTGGTGTTCATATTGGATATGCTAA
CGGTTCTGGTTTGGCTCTCACGATCATTTACTTTTCAATGATGATCTTAT
CGTTTTTTGTGAGTGATCTCTCAAGAGAGTTTGATTTGAAAGAAGCAACA
AGGAATTACCATCAACATAACAAATCTTTGGAAATAGAGAAAGCAACAGA
GGTAGATTCATTTGAGAAAACTGATGAAGCATTGAAAGAAAGTGATGTTC
AGACATCAATACTGCCGACAAAGCTAGAGCCAGACCAAGAAGAACCTTTA
CTAAACACTATTGAGACAATCAAACAACTGTTAACTAATATAGATGCTAT
GATTTTATTGATGATTgcgtttttcttttcttactCAATTGTTACATTTG
AATCTTGGATCCCCATGACATGTGTTAATTTCCTGCACTGGAATTTGGCT
GAAATCAACGCAATTGTTTTGGCGACTGGTGCTGTTTGCAGCATAAGTCT
TTCAGGTTTCGCTGTTATTAACGTAAGTCACTTTGCTTTTCACCTATTGG
CTGTCTGCAGTTGCATATCATTGGCGTTTGTTTAcgtaatgtttttatat
ttccaTTGGTACGGTGGTTTGATTTTCGCCGTCGATATAACGATTTGGAT
ATGCTATACGTTCTGCTTTTCACTCCTCGCAATTGGCTTTGAAATGTTCA
CGTCGATAACATTAGCTTTGATGGTACCTTCAAGAGTACAAACTTCCGCT
GAAAGTATCCGACTAGCTTTTTCAAGTGGCGGTGCTTCAATTGGTATGTT
TACGGCTGCGTTCCTGTTTCACGTATTATCGTATTTCAACCCTATATGCA
TTGTTCTGTGCTTTGTTCTGTCTTCTATGTTAGTGTGGAGAcggaaattt
ttccaaaatccgAAAGAAATTTTACATTAGGTTTAAGTGGATACATATCC
CCTATCTTGACATCAGAGATTGCTCGTTCCTATCCACGAGATGAAGTTTT
AGGGAAACTATCAACATTATGCTTTTCCTTCTCGCTGGGTTTGATAGGCG
GTCCGTGTATCAATTTCGCCTTTATACGAGCTGATTTTCGGTTATTTGGT
GTTCATATTGGATATGCTAACGGTTCTGGTTTGGCTCTCACGATCATTTA
CTTTTCAATGATGATCTTATCGTTTTTTGTGAGTGATCTCTCAAGAGAGT
TTGATTTGAAAGAAGCAACAAGGAATTACCATCAACATAACAAATCTTTG
GAAATAGAGAAAGCAACAGAGGTAGATTCATTTGAGAAAACTGATGAAGC
ATTGAAAGAAAGTGATGTTCAGACATCAATACTGCCGACAAAGCTAGAGC
CAGACCAAGAAGAACCTTTACTAAACACTATTGAGACAATCAAACAACTG
TTAACTAATATAGATGCTATGATTTTATTGATGATTgcgtttttcttttc
ttactCAATTGTTACATTTGAATCTTGGATCCCCATGACATGTGTTAATT
TCCTGCACTGGAATTTGGCTGAAATCAACGCAATTGTTTTGGCGACTGGT
GCTGTTTGCAGCATAAGTCTTTCAGGTTTCGCTGTTATTAACGTAAGTCA
CTTTGCTTTTCACCTATTGGCTGTCTGCAGTTGCATATCATTGGCGTTTG
TTTAcgtaatgtttttatatttccaTTGGTACGGTGGTTTGATTTTCGCC
GTCGATATAACGATTTGGATATGCTATACGTTCTGCTTTTCACTCCTCGC
AATTGGCTTTGAAATGTTCACGTCGATAACATTAGCTTTGATGGTACCTT
CAAGAGTACAAACTTCCGCTGAAAGTATCCGACTAGCTTTTTCAAGTGGC
GGTGCTTCAATTGGTATGTTTACGGCTGCGTTCCTGTTTCACGTATTATC
GTATTTCAACCCTATATGCATTGTTCTGTGCTTTGTTCTGTCTTCTATGT
TAGTGTGGAGAcggaaatttttccaaaatccgAAAGAAATTTTACATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:342317..345347 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 358-1425:1964 |
| Aaloc | 1-354:1 |
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