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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000345_pilon:123886..127555+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013551 ID=XLOC_013551|Name=XLOC_013551|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3670bp|location=Sequence derived from alignment at sc0000345_pilon:123886..127555+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATCAGACGTTCACAAACAATTATTACCAACGTCAAACATGTCCG
GCTCATGAGTAAGTGTCCGTTAATTAAATCATTATCGACAAAACTAGGGA
AGCCCCTCGCAGGCTCAATACTTAGTTAGAGTCTccggaattttttgaaa
aagctcTATTTTTGCTAAATGTGAGTGGCCTTCCCCGTTTTCCTGGTTta
tcaaggggggggggggtactaaatAATGAATTCGTTAGTGTGAAGGAAAA
CAGCTTTTCAAATAAGCTTCTACTTTGAGGTTGTAATCTTTAAACTTTAA
GGTGCTTTAAAATTACTATTCTTCGCCTTTCATAATCTATTAATTTAGCA
AAACAGACCAGACCCCCTGAgatatttttctaaaagttaAAACTTTAAGG
AAGGTTTTCTTTGAGGTTTTCAGTGTTGATTaacaaaaatgttgataaaa
ttctccttttgaatTCTCTATCTTGGATTTCAAATCGCGTTCTTGCCACG
AAGCAAGTCtgactttttaaatatttatcttACAATGAGCTTGTGATaaa
aaaaGTACAATAGAGGACTAGTACCCAATCTCCTCCTTCTCGGTTTTTCC
ATATATACAAAGTTTGAAGAGAGATTAAAAAGAGATAACTTTAGGTTTCA
AAATTCCCCtttcaaaacattaaaacaacATGGCTAGTTAGAGCAAACAC
TAATTACTCTTATCTTTGCATAATCATAGAAAATCACACTAGCATCACGA
AATATTGCTAACTTAACTTCGGTCAGCTTAAAGCCTTACCGTTGGCGCGA
TTGACCAAATAAAGACTTTATTTAATATAAACAAGAAATCTCAGGATTGG
TAATATCAGatcaaatttcaattcaaaattttcttcctatAAAGGTCATC
AGGTTACCATTTTCCGCTAATTTTGTCAGGAAAAAGATGACCAAACTAAA
CTTTTCACGTGCATACACCGTGGATAAACAAAATATCATAGGTCTTAAAG
GTTAAGGAGAGGGTGTCGAACAATAGAGCAAACAGTATAAGCGtgataat
tttaaaaatgatgGCACTATCGTACGATGAATAAAACTAATTAGCAAact
tcaaataaaatgaaaaaacttttccttcaaAGAGTTATACTAACTTGTCT
TCATCTACCTCCACAGCGAAGAAATATTTTAGCAATAAAACAAAATAGCA
TCACTCTGAAAGCATCAGAAcacgttttcaaaaaatttctcaaaataagt
CACCTCATGGGAACAACAAACAGCCAAGTTGAAAGGTTATTTGAATCTGT
TTGAATCCATGGTAAACATTATTTGAAGTGAACGTAAAAGGGTTTCCAAA
TAAAAAGCTCTTAAGATGAatcagttttcaaagaattacTCCTGGTAAAA
GCTAAACTATTAACCGAAATTCTCAAATCAATTACAATAACTTGCCCGTT
GACAACAAAAATGATCTCCTGAGCCATAAAAAACTCATGTGTTAAGTCAA
CTTTGATAGTCAATATATTACGCTCAGAGATTTACTCCTTTGTGTACTCT
ATAGATCTGTCGAGGAGCAAGCTCTGCTTCTCCACTCAGTACAAGTGATT
GTGCAAAACTCAACACTCATCAAACACAACATCCCCAATGTTTTGACCAC
TCTGGTGTcaacagcagtctatgctcgTTTATCCGAGTCGCACTGACGAG
TTTATAAATCCAAATGTATACACTTACTATTGACTTAAAGTAGCGAAAGA
ATCCTAAAGTAGccatataatttcaaaatactCAATCTATTCTTATTTCA
TCACAGGTAAAAATGTCTACACATACGAGAACAGATATGGTGGAATCGTT
CGTGACTATCCATTGGAAGAAGTAGAGAGTCTGAAAGGACGTGCACCATT
CTTACCAGACTGTACCATCGCTAGAGTTGGTTCTGATAAATTATGGAAAG
CTGTCACCGAAGGAGAAGGAAACTACATTAATGCTCTTGGTTGTATCACT
GGTAAGCTCCATTTACTTATCTTCATTAGAGGCAAATATTGAATCTTGGT
CAAAAAATCTACCAGTATCCGCCTTTCAAATCCTCCAGAATAATTAGATG
AGGtttttatctttcaaattcaacagTCTTACAACTTGAACGTTAGTATG
AATTgcggaaaacaaaaaaaaaccatgCTACTCATTCTTCACTATTTTAC
ACAATCTTGTAAACGATCTCACTGAAGAATCACCATAACATTGAAACATG
AAAGTTTGCTTCGGTCCAATCAACTTTATTCGTTACATTTTATTAGGTGG
ACAAGCTGTACAAATGGCAAAAGCTGGTCTGAAATCCATTTACATGTCTG
GATGGCAAGTAGCTGCTGACGCTAACTCAGCTGATCAAGTCTTCCCAGAT
CAATCTCTATACCCAGCTGATTCAGGACCAAAGCTTGTCAAACGTATCAA
TAATGCACTCATGAGAGCTGATCAGATTGCCAAGTTGGAAGCAGTTGAGC
AACACGTTGATTACATGTTACCAGTCGTTGCTGATGCCGAAGCTGGCTTT
GGTGGAGCCTTGAACGCTTTCGAAGTTGCCAAGAACATGGTAAGAATATA
ACAGTCACACATAatgttgtttttaaaaagtgCCAACTTCCCAATTTCGG
AGAGTTAAAATTCTAGCATTACAAGCAAAGGCATATTTACGTCACTAAAA
TGTACAGAAATATATGAGATGTCTCTTAATGACAACAACCTTTGAGTTGT
GAAGTGTAGAAAATCTGGCATGCcaatgaaaaacttttgaagtaCTATCT
ATTCACCTTCAAGTCTTTGACCATGCTTTTTAATTCTTTCTTCATCAGAT
CATGTCCGGAGCTGCTGGACTCCATTTCGAAGACCAGTTAGCATCAGAGA
AGAAATGCGGCCATATGGGAGGCAAAGTCTTGGTACCCACTAGTCAATTC
ATCCGTACTCTCAATGCTGCTCGATTAGCATCTGACATTCTCCAAACACA
TACATTGATCATTGCCAGAACTGATGCACAAGCTGCCAATATGATCACCA
GTGATGCTGACAAACGTGACCACAAATTCTTGACTGGTGAACGTACACCT
GAAGGATTTTATGTTTTAAAGAATGGTATTGACACTGCTATTGACCGTTC
CCTGTCATACGCTCCATATGCTGATTTACTGTGGTGCGAAACTGACCGAC
CAGACCTTAAAGAAGCTAAATATTTCGCTGAAAGCATCCATGAATACTTC
CCAGGAAAACCATTAGCTTACAACTGTTCCCCATCATTCAACTGGTCTGA
ATACTTGACTGAAAAAGAAATCGAGAATTTCCAAAAGGACCTTGGTAAAC
TTGGATTCCGTTACCAATTCATCACATTGGCTGGATTCCACAACATGAAC
CACGCCATGTTCAAAATGGCCAGAGCTTACAGGAAACGTGGCATGTCTGC
TTTTGTTGAAATCCAAGATGATGAAATGAGACAAGAAAACCATGGATTCA
CCGCCCGCAAACATCAACGTGAAGTAGGAGCCAGTTACTTTGACCGTGTC
ACCACAATGATCAGTGGAGGACAAGCATCAACTACAGCACTCAAAGGTTC
AACTGAAGAAGAACAATTTGAATACACTCAAGATTTGGAAACTTTCAAAA
GCTCCTTCAACTCTCCTTGA Coding sequence (CDS) from alignment at sc0000345_pilon:123886..127555+ >XLOC_013551 ID=XLOC_013551|Name=XLOC_013551|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2736bp|location=Sequence derived from alignment at sc0000345_pilon:123886..127555+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATCAGACGTTCACAAACAATTATTACCAACGTCAAACATGTCCG
GCTCATGAATGATGATCAGACGTTCACAAACAATTATTACCAACGTCAAA
CATGTCCGGCTCATGAGTAAAAATGTCTACACATACGAGAACAGATATGG
TGGAATCGTTCGTGACTATCCATTGGAAGAAGTAGAGAGTCTGAAAGGAC
GTGCACCATTCTTACCAGACTGTACCATCGCTAGAGTTGGTTCTGATAAA
TTATGGAAAGCTGTCACCGAAGGAGAAGGAAACTACATTAATGCTCTTGG
TTGTATCACTGGTAAAAATGTCTACACATACGAGAACAGATATGGTGGAA
TCGTTCGTGACTATCCATTGGAAGAAGTAGAGAGTCTGAAAGGACGTGCA
CCATTCTTACCAGACTGTACCATCGCTAGAGTTGGTTCTGATAAATTATG
GAAAGCTGTCACCGAAGGAGAAGGAAACTACATTAATGCTCTTGGTTGTA
TCACTGGTGGACAAGCTGTACAAATGGCAAAAGCTGGTCTGAAATCCATT
TACATGTCTGGATGGCAAGTAGCTGCTGACGCTAACTCAGCTGATCAAGT
CTTCCCAGATCAATCTCTATACCCAGCTGATTCAGGACCAAAGCTTGTCA
AACGTATCAATAATGCACTCATGAGAGCTGATCAGATTGCCAAGTTGGAA
GCAGTTGAGCAACACGTTGATTACATGTTACCAGTCGTTGCTGATGCCGA
AGCTGGCTTTGGTGGAGCCTTGAACGCTTTCGAAGTTGCCAAGAACATGG
TGGACAAGCTGTACAAATGGCAAAAGCTGGTCTGAAATCCATTTACATGT
CTGGATGGCAAGTAGCTGCTGACGCTAACTCAGCTGATCAAGTCTTCCCA
GATCAATCTCTATACCCAGCTGATTCAGGACCAAAGCTTGTCAAACGTAT
CAATAATGCACTCATGAGAGCTGATCAGATTGCCAAGTTGGAAGCAGTTG
AGCAACACGTTGATTACATGTTACCAGTCGTTGCTGATGCCGAAGCTGGC
TTTGGTGGAGCCTTGAACGCTTTCGAAGTTGCCAAGAACATGATCATGTC
CGGAGCTGCTGGACTCCATTTCGAAGACCAGTTAGCATCAGAGAAGAAAT
GCGGCCATATGGGAGGCAAAGTCTTGGTACCCACTAGTCAATTCATCCGT
ACTCTCAATGCTGCTCGATTAGCATCTGACATTCTCCAAACACATACATT
GATCATTGCCAGAACTGATGCACAAGCTGCCAATATGATCACCAGTGATG
CTGACAAACGTGACCACAAATTCTTGACTGGTGAACGTACACCTGAAGGA
TTTTATGTTTTAAAGAATGGTATTGACACTGCTATTGACCGTTCCCTGTC
ATACGCTCCATATGCTGATTTACTGTGGTGCGAAACTGACCGACCAGACC
TTAAAGAAGCTAAATATTTCGCTGAAAGCATCCATGAATACTTCCCAGGA
AAACCATTAGCTTACAACTGTTCCCCATCATTCAACTGGTCTGAATACTT
GACTGAAAAAGAAATCGAGAATTTCCAAAAGGACCTTGGTAAACTTGGAT
TCCGTTACCAATTCATCACATTGGCTGGATTCCACAACATGAACCACGCC
ATGTTCAAAATGGCCAGAGCTTACAGGAAACGTGGCATGTCTGCTTTTGT
TGAAATCCAAGATGATGAAATGAGACAAGAAAACCATGGATTCACCGCCC
GCAAACATCAACGTGAAGTAGGAGCCAGTTACTTTGACCGTGTCACCACA
ATGATCAGTGGAGGACAAGCATCAACTACAGCACTCAAAGGTTCAACTGA
AGAAGAACAATTTGAATACACTCAAGATTTGGAAACTTTCAAAAGCTCCT
TCAACTCTCCTTGAATCATGTCCGGAGCTGCTGGACTCCATTTCGAAGAC
CAGTTAGCATCAGAGAAGAAATGCGGCCATATGGGAGGCAAAGTCTTGGT
ACCCACTAGTCAATTCATCCGTACTCTCAATGCTGCTCGATTAGCATCTG
ACATTCTCCAAACACATACATTGATCATTGCCAGAACTGATGCACAAGCT
GCCAATATGATCACCAGTGATGCTGACAAACGTGACCACAAATTCTTGAC
TGGTGAACGTACACCTGAAGGATTTTATGTTTTAAAGAATGGTATTGACA
CTGCTATTGACCGTTCCCTGTCATACGCTCCATATGCTGATTTACTGTGG
TGCGAAACTGACCGACCAGACCTTAAAGAAGCTAAATATTTCGCTGAAAG
CATCCATGAATACTTCCCAGGAAAACCATTAGCTTACAACTGTTCCCCAT
CATTCAACTGGTCTGAATACTTGACTGAAAAAGAAATCGAGAATTTCCAA
AAGGACCTTGGTAAACTTGGATTCCGTTACCAATTCATCACATTGGCTGG
ATTCCACAACATGAACCACGCCATGTTCAAAATGGCCAGAGCTTACAGGA
AACGTGGCATGTCTGCTTTTGTTGAAATCCAAGATGATGAAATGAGACAA
GAAAACCATGGATTCACCGCCCGCAAACATCAACGTGAAGTAGGAGCCAG
TTACTTTGACCGTGTCACCACAATGATCAGTGGAGGACAAGCATCAACTA
CAGCACTCAAAGGTTCAACTGAAGAAGAACAATTTGAATACACTCAAGAT
TTGGAAACTTTCAAAAGCTCCTTCAACTCTCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000345_pilon | genome | sc0000345_pilon:123886..127555 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 547-1368:2849 |
| Aaloc | 256-546:2299 |
| Aaloc | 61-252:1809 |
| Aaloc | 1-57:1 |
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