|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000353_pilon:10841..12520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013379 ID=XLOC_013379|Name=XLOC_013379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1680bp|location=Sequence derived from alignment at sc0000353_pilon:10841..12520+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGCATTCATGGCAATCAGTCTTAATATTAATGGTTTTTGTATCATT
ATCGATGCTACTTGTATACCCAGTAGTCAATCACCCTCGACCCATAACTA
TACTACCTGCACTGCGAACATTGGTTGACCagacaaaaattgaaatcaaa
atcacgAAAGAGAATAACAAGGAAAACACCGGATTGAAAATTCATCGAAA
AACGAATATAACTCAATATATAAAGAGTTGGACAGGTGATTGCCCTTTTC
CAAATTATGCATCTAAATTAGTGAATGAGTCATGGTTCCCAATGTTCTTG
GAAActttacaaaaagttgatttaaagccaacaaaaaataaaagaacaac
TGAACACTGTACAAGGTATGTATGTCAACTTGACAACTTGAATGTATGCA
ACCCTACGCATTTTTTCCAGTAGATTAATCTTATTAGAGCAACAAGGTtt
acaaaaacaagaaaagcTAAATTTTACGATTCAAATAGTAAACTTAGTGT
AATTAGGTTTTCCCTAGCAAcagtttaagaacaatttagacTAGCACATG
TCGTGCTGAACAATGAAAACAGCCGAGTCTCGACAAAAATGTGCAGCAGT
TCTAGTCCAAAACTTTGTAGCAAAAACGTTTCAAAGGGCCATTTAGCCAG
GAGCCATGGAATAAACGGTAAGGGGGACTATAAATTAGAGGGaccgattt
aaaaaaaaatgaaatgacaaaattcctttgaaagtttttggctCTTTCCC
TTGAAAAAAGCTTTGACGGAGATTTTGACCCCTCCTGTAAGTAATCaata
gagaatttttttttaaatctacccAAAAATAGAAGACGGTAGTCTAAGTA
ATACTACAAGAGTACTCCCTCTCAAatctttctttatctttttattcaga
TGGTGGCATTTGACACCTCAGGCCGATTACAAAGACATCCCACCGCGCAA
GCTTAAATGGAAAGAGCCAACAAGACCAGGTAAAGGTTTTATCAGACCCA
ACTGTACTTTTGGACAAGACTTAATACCGTGGACAAAATGTTCAAAGGCT
CATAACAAGTTATGGAGAGAGTTGGATAAGATGGGAGCCATTTATTTTCC
ACGGTCAGGAAGTGAGCTCGGTGTCGTAAGAGGGAGTTCTTATTTATCCA
GTGATGGAGacgttgatatttttgttgatattccacaagaaaaactttat
caaatgctACAAAAAGTATTAAAACCCTCTCCACATGTAGATGGGTCATT
AAAAAGCCTCAGAGCTGAAATACACTGGCGTGTAAAAGGATGTGCTGAAA
TTCATTTAGTTTTTAATGAATGGATGGTTGACGAAATGACTAAAACTGGG
CAATCAAGACCAACCCATAATTCGACATGTAATTGTTATATGGACTCAGC
AAGGCTAACTTGTCATAAAGATGCTAAGAATCGCATGTATGCCCAATATG
GGCCCTCATGGTTTGTGCCCCTTCACGCTAAATATTTGGATGATCCCCAT
TTAGCCAGAGGCAAAAGTATCCATACAAAATTGAATGAATTAGTCTCCAA
AGACGGTCTAATACACGAGAATGCTATACAGAAACTTGATCAGAAAATTG
TGTATACTAAAGACCAGATGGAGATGATTTTAGCACAATTAAATGTTCTT
TATCAATTAATAAAGAAAGGATATCGTTAA Coding sequence (CDS) from alignment at sc0000353_pilon:10841..12520+ >XLOC_013379 ID=XLOC_013379|Name=XLOC_013379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2292bp|location=Sequence derived from alignment at sc0000353_pilon:10841..12520+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGCATTCATGGCAATCAGTCTTAATATTAATGGTTTTTGTATCATT
ATCGATGCTACTTGTATACCCAGTAGTCAATCACCCTCGACCCATAACTA
TACTACCTGCACTGCGAACATTGGTTGACCagacaaaaattgaaatcaaa
atcacgAAAGAGAATAACAAGGAAAACACCGGATTGAAAATTCATCGAAA
AACGAATATAACTCAATATATAAAGAGTTGGACAGGTGATTGCCCTTTTC
CAAATTATGCATCTAAATTAGTGAATGAGTCATGGTTCCCAATGTTCTTG
GAAActttacaaaaagttgatttaaagccaacaaaaaataaaagaacaac
TGAACACTGTACAAGATGGTGCATTCATGGCAATCAGTCTTAATATTAAT
GGTTTTTGTATCATTATCGATGCTACTTGTATACCCAGTAGTCAATCACC
CTCGACCCATAACTATACTACCTGCACTGCGAACATTGGTTGACCagaca
aaaattgaaatcaaaatcacgAAAGAGAATAACAAGGAAAACACCGGATT
GAAAATTCATCGAAAAACGAATATAACTCAATATATAAAGAGTTGGACAG
GTGATTGCCCTTTTCCAAATTATGCATCTAAATTAGTGAATGAGTCATGG
TTCCCAATGTTCTTGGAAActttacaaaaagttgatttaaagccaacaaa
aaataaaagaacaacTGAACACTGTACAAGaTGGTGGCATTTGACACCTC
AGGCCGATTACAAAGACATCCCACCGCGCAAGCTTAAATGGAAAGAGCCA
ACAAGACCAGGTAAAGGTTTTATCAGACCCAACTGTACTTTTGGACAAGA
CTTAATACCGTGGACAAAATGTTCAAAGGCTCATAACAAGTTATGGAGAG
AGTTGGATAAGATGGGAGCCATTTATTTTCCACGGTCAGGAAGTGAGCTC
GGTGTCGTAAGAGGGAGTTCTTATTTATCCAGTGATGGAGacgttgatat
ttttgttgatattccacaagaaaaactttatcaaatgctACAAAAAGTAT
TAAAACCCTCTCCACATGTAGATGGGTCATTAAAAAGCCTCAGAGCTGAA
ATACACTGGCGTGTAAAAGGATGTGCTGAAATTCATTTAGTTTTTAATGA
ATGGATGGTTGACGAAATGACTAAAACTGGGCAATCAAGACCAACCCATA
ATTCGACATGTAATTGTTATATGGACTCAGCAAGGCTAACTTGTCATAAA
GATGCTAAGAATCGCATGTATGCCCAATATGGGCCCTCATGGTTTGTGCC
CCTTCACGCTAAATATTTGGATGATCCCCATTTAGCCAGAGGCAAAAGTA
TCCATACAAAATTGAATGAATTAGTCTCCAAAGACGGTCTAATACACGAG
AATGCTATACAGAAACTTGATCAGAAAATTGTGTATACTAAAGACCAGAT
GGAGATGATTTTAGCACAATTAAATGTTCTTTATCAATTAATAAAGAAAG
GATATCGTTAAaTGGTGGCATTTGACACCTCAGGCCGATTACAAAGACAT
CCCACCGCGCAAGCTTAAATGGAAAGAGCCAACAAGACCAGGTAAAGGTT
TTATCAGACCCAACTGTACTTTTGGACAAGACTTAATACCGTGGACAAAA
TGTTCAAAGGCTCATAACAAGTTATGGAGAGAGTTGGATAAGATGGGAGC
CATTTATTTTCCACGGTCAGGAAGTGAGCTCGGTGTCGTAAGAGGGAGTT
CTTATTTATCCAGTGATGGAGacgttgatatttttgttgatattccacaa
gaaaaactttatcaaatgctACAAAAAGTATTAAAACCCTCTCCACATGT
AGATGGGTCATTAAAAAGCCTCAGAGCTGAAATACACTGGCGTGTAAAAG
GATGTGCTGAAATTCATTTAGTTTTTAATGAATGGATGGTTGACGAAATG
ACTAAAACTGGGCAATCAAGACCAACCCATAATTCGACATGTAATTGTTA
TATGGACTCAGCAAGGCTAACTTGTCATAAAGATGCTAAGAATCGCATGT
ATGCCCAATATGGGCCCTCATGGTTTGTGCCCCTTCACGCTAAATATTTG
GATGATCCCCATTTAGCCAGAGGCAAAAGTATCCATACAAAATTGAATGA
ATTAGTCTCCAAAGACGGTCTAATACACGAGAATGCTATACAGAAACTTG
ATCAGAAAATTGTGTATACTAAAGACCAGATGGAGATGATTTTAGCACAA
TTAAATGTTCTTTATCAATTAATAAAGAAAGGATATCGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000353_pilon | genome | sc0000353_pilon:10841..12520 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 367-1146:901 |
| Aaloc | 1-363:1 |
|
