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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:66814..70734+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013352 ID=XLOC_013352|Name=XLOC_013352|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3921bp|location=Sequence derived from alignment at sc0000250_pilon:66814..70734+ (Clytia hemisphaerica_ch_hm2_pilon)
GACATCAACGGAAATTTACTGTGTCCTCCAATTGGACAACTACCACCACC
TTACTCTAATCCCATTGGGTTGCAAACATTGACACACGCACATCATTTGG
CGCCCCCACCACCCCCACCTTCTGGAGTTGGGTAAGTTTCCTTTTATCTA
CTATTAGCACTCTTAAGGGACCATTCCTTAGGGCCCGTGCCGAAAATTCC
cgataaaaaatttcttcctaacGAAGCGATTACAATAATGACAGGGTTGT
CTATAAGTGTaaaaaaaCCAGTATCGTGAAAAGGGGTCTTCCACATTGAG
Ttgaaagcccgaagggctagagtagaatctctaacctttctcaggcaaga
ataagtgaaaccttaaaaaatgcgccgtatttttttgacgacagattgaa
tctagcaattcctttgtttacgattgatatttttttcgaaatttagcggt
aaattttagtttcaatctatcatttgttgcttggcttcaaatcctaccaa
agagattgacttctagccttcggcttctacTTCATTGGTTTTTCATCGGC
CCTCAGTATAATCAGTCTTTCCAAACTCTGTAACCTACAAACTTGCTCCG
CCTATATTTTacatttcttttcttcttttaaaaaatattctttctcCCTC
TCCCTTTGGGTTATTTTCGGGGAAATGCTCTCCTGAATTTagcctaaaat
ttgaaaaaacctcCATGACGGAGAGCGAAAAGGCTTGTCGATTTCAACAG
GAAATGTGATTTGATTAAAGTAATCAATTTCAACGTTCGATTTTATTGTT
GAACATCTtgtaaaacaagaaaattttataaaagaaaaaaagaaaccttt
tgttttgatgtttcttgtttcgaaatgctttcatttgagcttgttttgtt
tggcatgtttgtAAATTGGGATTTTTTGGAAAGTTCCTGGGACATCGTTT
TTGAGTAGGGTAGGCTTTGTGGGTTTTTGAATACGATGCTGTATCCCACT
GATATGGTTGTATGCAATCAATTTTCGTAAGTTCTGAATTCCTTTTATAC
TATACATTTAGAACCATAAGGTTCGAGAAAGTTGGGTGTGTTCACAAATT
TCCCTTTTGACGATCTTCAATAAATTTCTCAACCTCAGAAGTGACTTTTT
GACATTTAGATTATATCCTGTAACCTTTCCCTAGACTTGGGAATGAACAA
ACTATATAGAACTTAAGGCTTCGATTAAGAACATTGTGttcttttttaat
ggaacagctcCTGAAGTTTCAGGAGTTAAttaattagggccgactaaaaa
tttagaaatcgccaaaacttaattattagtcggcgcttagtactagtaat
cgtcagtaaacattcgaaaacctcctttttttcttttgtttaaaaagaaa
acattgcagtgtaatttttctttgttttcaattaaaagaagctattgtaa
cgtaaaatttctttgttcttttttatattgaagaaaaaaaaatgtctttg
ttttttattatatagtaaaaaaaagtcactgacacaggacttgggagaga
aaagaataaggggacaaaagtgtccccccgccgaagagtgcaaaaagtgg
taatagtgcaattaacgattaatcgcactcctctaaaccaatcagattcg
agtaattttgcacggctgacgattacatatacaaattttgacgaggtact
aaaattagggccgactaataattaaggccgactaagttttggctgaTAAG
GTATATAAGAACAAGGCTTCGacggcaaaaatgttaagaacaagttaaga
acatttttaggctttatgGAGTCAAAAACGCTCGGTTTCTTAGGAAAGTG
GGTAGAAATGGTTAAAAATTGGTGgcaataagaacatgttaagaacattt
ttaggcttgaaacccaaaaagttaagaacatccgaaggcttcaaaaagtt
tggatgttcttatttaaaaaaacgtgtatcccaTTTCCATTTAAGATGTG
AACTTGACAAAGCAGTTTTCGAGAAACAGCCACCTTCTAACCTTCGAAAA
AgcaacttttttcattttgtgttATCACTTTacgacaaaaatgaaaatgc
aatCGAGACAGAGAAAGGACTTTTCGTTGGATTCATCAAGGATAAAGACG
AGGAAATTCCAGGATCCAATGGAATTCAATATAGACTTTCTTTAGTTTAT
CCCAATGGTAAGCGAAGATATTCTTAGACTCTTCACCTTTAACCGTTAGG
CCAAATAGAATTTTGaacttctttatttttggtTCCAAAAATCGACATAC
ATACAATTATGGAGCATCCTTTGAAAGGATTTATTTTACTACCAATATCA
ATCGCTCCCTAAGTGTCTCTCGGGAGTCGAATGTTATTTGTTGATTCATC
AGGATCCGAGAATTGTTTATGTCACCTAATTTCTCAAACAACAAATAATC
gatttttttcctgttttttttcatAGGCTATCGAACGGAACAAGACATTT
ACGTACGCTTAGTAGACTCTCAATCTGGTGAGGTAAATAGTACTATtatt
tgttgaatatttttattgGAGTCAATTTTAGTCCttagaaaaaattatct
ttGCCAAATTTACTCCGTTAAgttttaatttcatttgaaattacGAAGCC
TGGTCCTTCcattttcatttggacaatCCGTTAAATAAAACCTTATTACC
CAGATGATAGTTGACGGGTTATAAAATTGGTGCGAGATATTTATATTATA
GGTTATTGTGTGCATTTTCAAGCGACTCTCATAGGATTGTTATTTAACCT
AAAGTATACTCTTATTTGCTATTATCTCCTCTTGAAAATTCTTACCATAA
TTCCAAAATCCCGACGATGgataaagtatttttcaaatttagttaaaatg
aaaaaagttttataatgttacattttatttttttatgttcaaattgattt
ttaaaagaatttcaaaatccaaactttatgattttttagttGATCAAATA
TGAAGGACAAGACAAGAACCCAGAGATGTGCCGTGTTCTCTTGACCCATG
AAGTTATGTGCAGGTATGAAAACTACCGTTGAAAGCTCGAGACTAACTCA
AACTAATGAACTTGATTACCCAAGGAGTATTGATAACTGAACCTTTTTTG
CGAACAAATGCTTATTActattttgatagaattttcgAGTTTGATTCTAG
TTCCAATTTTGTCGAAAGTGAAATTCAACCGTGGCATGTAAATAgtggat
ttttttttgtaatatatgttgtTCGTTTTAAATCAGGTCTGTGGTCTCAC
TTATAGTCGAAATCTTgttataattttgcataaattatgcatattgtggg
gaaattccctgtttgcaatcattttttgaccacaaaaacgtctataactt
ttgatcaagaaagttgagactttgatgtaatacatttttttgtcaGTTTG
AAAAGCTTTATCGCGTGGTacaggtcttttttgattttgaagaccctcca
aaaatcatgaatttttagGGCTTACAAATTTGCCTGAAAACCCCAAAAtt
gcaaattacgcaaaaactgcgggtttacaagcttggtaacattcaaattc
agaATTAGCACTCTCAACTAGACTaggaaacatatcaaaaagttggtcac
ggacattttgaattttttctctatttttgaaactttagcaatccactggc
cacggcctaTTACGTTCGCCGCGCAAAGAATTTTTCTGCTAAATTTTCAT
CATAatgatttaaactttttattttgtagtcGATGTTGTGATAAGAAGTC
ATGCGGTAACCGAAACGAAACACCGTCTGATTGTGTTGTCGTTGAAAGGT
ATGTCATTTTATTTTACGATTGTGTTTTCAgtgaagaaaaatacaaaatt
actACAAATTGgcttttttag Coding sequence (CDS) from alignment at sc0000250_pilon:66814..70734+ >XLOC_013352 ID=XLOC_013352|Name=XLOC_013352|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1230bp|location=Sequence derived from alignment at sc0000250_pilon:66814..70734+ (Clytia hemisphaerica_ch_hm2_pilon)
GACATCAACGGAAATTTACTGTGTCCTCCAATTGGACAACTACCACCACC
TTACTCTAATCCCATTGGGTTGCAAACATTGACACACGCACATCATTTGG
CGCCCCCACCACCCCCACCTTCTGGAGTTGGGACATCAACGGAAATTTAC
TGTGTCCTCCAATTGGACAACTACCACCACCTTACTCTAATCCCATTGGG
TTGCAAACATTGACACACGCACATCATTTGGCGCCCCCACCACCCCCACC
TTCTGGAGTTGGATGTGAACTTGACAAAGCAGTTTTCGAGAAACAGCCAC
CTTCTAACCTTCGAAAAAgcaacttttttcattttgtgttATCACTTTac
gacaaaaatgaaaatgcaatCGAGACAGAGAAAGGACTTTTCGTTGGATT
CATCAAGGATAAAGACGAGGAAATTCCAGGATCCAATGGAATTCAATATA
GACTTTCTTTAGTTTATCCCAATGATGTGAACTTGACAAAGCAGTTTTCG
AGAAACAGCCACCTTCTAACCTTCGAAAAAgcaacttttttcattttgtg
ttATCACTTTacgacaaaaatgaaaatgcaatCGAGACAGAGAAAGGACT
TTTCGTTGGATTCATCAAGGATAAAGACGAGGAAATTCCAGGATCCAATG
GAATTCAATATAGACTTTCTTTAGTTTATCCCAATGGCTATCGAACGGAA
CAAGACATTTACGTACGCTTAGTAGACTCTCAATCTGGTGAGGCTATCGA
ACGGAACAAGACATTTACGTACGCTTAGTAGACTCTCAATCTGGTGAGtt
GATCAAATATGAAGGACAAGACAAGAACCCAGAGATGTGCCGTGTTCTCT
TGACCCATGAAGTTATGTGCAGttGATCAAATATGAAGGACAAGACAAGA
ACCCAGAGATGTGCCGTGTTCTCTTGACCCATGAAGTTATGTGCAGtcGA
TGTTGTGATAAGAAGTCATGCGGTAACCGAAACGAAACACCGTCTGATTG
TGTTGTCGTTGAAAGGTATGTCATTTTATTTTACGATTGTGTTTTCAgtg
aagaaaaatacaaaattactACAAATTGgcttttttagtcGATGTTGTGA
TAAGAAGTCATGCGGTAACCGAAACGAAACACCGTCTGATTGTGTTGTCG
TTGAAAGGTATGTCATTTTATTTTACGATTGTGTTTTCAgtgaagaaaaa
tacaaaattactACAAATTGgcttttttag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:66814..70734 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-618:3781 |
| Aaloc | 403-474:2990 |
| Aaloc | 349-402:2479 |
| Aaloc | 136-345:1997 |
| Aaloc | 4-132:1 |
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