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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000250_pilon:71052..73968+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013351 ID=XLOC_013351|Name=XLOC_013351|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2917bp|location=Sequence derived from alignment at sc0000250_pilon:71052..73968+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGTAATCAAAATTGTTTAAAGTCAGCTGGAAACCCTCGAGACGT
CAGGAGATTTCAGGTAGGAAAGAGACGTCTTTTTAGCATTTAGCATTTAG
CATTTTGAATTTAAGACTTCACtgggaaaacatttttctacTGAATCAAA
AAATGTTCTAGAGATTGCCTTCATCAATCAATCCAGCTAAGAGAGGACGG
AGCTAgagaacattttctttgagattttttatcattatcatAAGAActag
tactcttaggttccaaataaacgggcccccccgcttgttaatttttcgaa
aattttccaacccccccggaccttattaggacccccccccccccgtttat
taatctttaagaatattttcagctgtcaaagagaaggccccttattttgc
tctaaatagcctgattttagcctatctttaccttatttttgggtttcaga
agtacaatttccaacccccccggcaattaggtcccccccgtttattaaaa
tctagaaaattttccaacccccccccgttagattcgaacccccccccccc
cccccccccgtttatttggaacctaagagtactttgataaaaaatgttct
acttttttttcagatttcagtTTCAACAAAACCAGACTTAGAAGATCCGT
TAGCACTATCCACCAATATGTTTGTCCACAATAATTCAAAACACGGCCGC
CGCTCAACCGCGCGTGACAAATTGGATCCGCTAGCGGACACGCATCCTAT
CATCAAGGCGTTGTTTCCTTCCGAAGGGTGGAATACGGGCGGTCAACAAA
TCATGATCAttggtgaaaatttctttgagggACTTCAAGTCATCTTCGGA
AATTGTTTGGTTTGGAGTGTAGaggtattatattatattattcatACAAA
AGAACCTTAGAATTTCCTGCATCTTTCGCATTTTCCATGGCAATTAGAGT
CTTAAAAAACGCTCACTACATATAACGAGAGGAGAGTTTGGAAAGTATCT
TTCATGCTTTCATAAATTTACATCATCTTAGGTTTGAGAAATATGAACTT
TCGGAATTCAATCTTTTATAAGTTTTGAATGTTGTTAGtgtttttacatt
agtaaacGAGTTGGTCTGCATAGAAACCACTGATGAATACTTATTTTCCT
TTTTGCACAGGTTTTTTCAGCGACTGCATTGCGTGTTGTTGTTCCGCCTC
ATCCGAACCCGACAGCTAACATGGTAGAAGTTGTACTGGCACACAATTCA
AGGCCAATCTTCTATGGTCCACCCGCTTGCTTCTTATATAACTGTAAGGA
ATGATTTATTACGggaaagatttttaagaaaaagaacaaaaaaacgtTCG
AGAAAGGTAGAGTCGTTTCCTCAGGGGAAATTACTTCACTCAATTCTGCA
ATTTTCGCGACCAACCAACTTCTTTCCCCGACAAGCTGTACCGCTTTTAT
tggttaattttgtttttgatataaaAACAATATATTTCACTCGAAAGATC
TAACAAATAAAATAGCGATTCCCTATTCTTTCTCCTTCAGCACTGAGTGA
TCCATCGATCGACAGCTCATTTCAAAGATTGAATCGTATGCTTCCACGAC
ATCCAAATGACCCTGAAAAAGTTCCCAAGGTAAATACTGTCAAATTCTTG
TCAATGTCGTGAGGAAAGGCCTCAGGTTTTATCAATGTCGTGAGCAAAGG
ACAAAGGTTTTACATCAAATCTTCAACGTTATACATTTCTTTAACGTGAC
TTTGTGCGAAAACCGCACGAACTAACTCGTGAGGTTGAAACAATCCCTTT
AAAGGCAGACATTGAATCTAATGTTTGGAGACACAACTACTTGGATTAGT
GTATATTGCTGAAGCTCAATATTCATTATATATACCACAACGTACGCTAT
TTTTAGGATATGATTCTTAAGCGTGCTGCAGACATGATTGAATCTTTCTA
CACATCAAGTCAACAAGCTATGACCTACATTCCATCACCTACGCCTCAAT
CAATGCTTCAAGCCTCCATGCGCCCTATGTCACAGTCATCAGCTTTCGGT
GGCGTTCCGCCATCGCCGTATTACCCTTACGCCTCAGGCTCTCCTTCGAT
GGCAATGGCCGTTCCAAATGGAGGGCGTCAAATACAAGGGCGGCCAGAGA
TAATGGTCAATGATGCACTGATGAACGGAAACGATGATGTTTTCGGTCAA
GAGGTTTGTCTTTGCAGTTTACTGTTTTGTAACTAACACTAGTTtagata
gaagttttttttatcttagCTATCCTGGTCGACAGCTCTTAAGTGAACTA
ATCAAACTGAGCGAGAACCATTCCTTCACGGGCTCGTACCTGGCCTCTAT
CATTCTATATCCTACACTCGCAATAAAATTACTCAATGAGTAATATCGCC
TACTACAGCTGGTTCTTTCGTAATACCAAATTCTTCTGTATTTTCATGTG
CTATTTCTTATACTCTGAAACATCCCTGGATGCTTCAAATTATCTCAGAA
GTGTGAcgtcaaaattgattttacggTGGATTTTCACTTAATACAATTCT
TTCTGTCTCATTTGCTATTCAATATTTCAAAGTATACCTCAACGCAGCGA
GCGTTCGGCACTAACATAACTCGTTCTCTACTTCAATCTATATCTTACCC
TTCCTTCTATCTCAGGAGCGAGACGAGAACAACAACGACCCATCTGATGA
AAACAGACACAACATCAAACGTATGAAACTCGAAAGTGATCACCAACCCA
ACGATCCAAACAAACTGCATCCCAACTCTCATATCAATGGTCAATACACA
GATAACCAATCACCGTCCTTTGTTTCTAATAACAACCCATCCAAATATTT
GTCACACCCGGCCCAATCAGGCACCCTGCCGATGTATGAAGCAGTGTATC
CACAAGGAATGAATGGT Coding sequence (CDS) from alignment at sc0000250_pilon:71052..73968+ >XLOC_013351 ID=XLOC_013351|Name=XLOC_013351|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2190bp|location=Sequence derived from alignment at sc0000250_pilon:71052..73968+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGTAATCAAAATTGTTTAAAGTCAGCTGGAAACCCTCGAGACGT
CAGGAGATTTCAGATGAAATGTAATCAAAATTGTTTAAAGTCAGCTGGAA
ACCCTCGAGACGTCAGGAGATTTCAGatttcagtTTCAACAAAACCAGAC
TTAGAAGATCCGTTAGCACTATCCACCAATATGTTTGTCCACAATAATTC
AAAACACGGCCGCCGCTCAACCGCGCGTGACAAATTGGATCCGCTAGCGG
ACACGCATCCTATCATCAAGGCGTTGTTTCCTTCCGAAGGGTGGAATACG
GGCGGTCAACAAATCATGATCAttggtgaaaatttctttgagggACTTCA
AGTCATCTTCGGAAATTGTTTGGTTTGGAGTGTAGagatttcagtTTCAA
CAAAACCAGACTTAGAAGATCCGTTAGCACTATCCACCAATATGTTTGTC
CACAATAATTCAAAACACGGCCGCCGCTCAACCGCGCGTGACAAATTGGA
TCCGCTAGCGGACACGCATCCTATCATCAAGGCGTTGTTTCCTTCCGAAG
GGTGGAATACGGGCGGTCAACAAATCATGATCAttggtgaaaatttcttt
gagggACTTCAAGTCATCTTCGGAAATTGTTTGGTTTGGAGTGTAGagGT
TTTTTCAGCGACTGCATTGCGTGTTGTTGTTCCGCCTCATCCGAACCCGA
CAGCTAACATGGTAGAAGTTGTACTGGCACACAATTCAAGGCCAATCTTC
TATGGTCCACCCGCTTGCTTCTTATATAACTGTTTTTTCAGCGACTGCAT
TGCGTGTTGTTGTTCCGCCTCATCCGAACCCGACAGCTAACATGGTAGAA
GTTGTACTGGCACACAATTCAAGGCCAATCTTCTATGGTCCACCCGCTTG
CTTCTTATATAACTCACTGAGTGATCCATCGATCGACAGCTCATTTCAAA
GATTGAATCGTATGCTTCCACGACATCCAAATGACCCTGAAAAAGTTCCC
AAGCACTGAGTGATCCATCGATCGACAGCTCATTTCAAAGATTGAATCGT
ATGCTTCCACGACATCCAAATGACCCTGAAAAAGTTCCCAAGGATATGAT
TCTTAAGCGTGCTGCAGACATGATTGAATCTTTCTACACATCAAGTCAAC
AAGCTATGACCTACATTCCATCACCTACGCCTCAATCAATGCTTCAAGCC
TCCATGCGCCCTATGTCACAGTCATCAGCTTTCGGTGGCGTTCCGCCATC
GCCGTATTACCCTTACGCCTCAGGCTCTCCTTCGATGGCAATGGCCGTTC
CAAATGGAGGGCGTCAAATACAAGGGCGGCCAGAGATAATGGTCAATGAT
GCACTGATGAACGGAAACGATGATGTTTTCGGTCAAGAGGATATGATTCT
TAAGCGTGCTGCAGACATGATTGAATCTTTCTACACATCAAGTCAACAAG
CTATGACCTACATTCCATCACCTACGCCTCAATCAATGCTTCAAGCCTCC
ATGCGCCCTATGTCACAGTCATCAGCTTTCGGTGGCGTTCCGCCATCGCC
GTATTACCCTTACGCCTCAGGCTCTCCTTCGATGGCAATGGCCGTTCCAA
ATGGAGGGCGTCAAATACAAGGGCGGCCAGAGATAATGGTCAATGATGCA
CTGATGAACGGAAACGATGATGTTTTCGGTCAAGAGGAGCGAGACGAGAA
CAACAACGACCCATCTGATGAAAACAGACACAACATCAAACGTATGAAAC
TCGAAAGTGATCACCAACCCAACGATCCAAACAAACTGCATCCCAACTCT
CATATCAATGGTCAATACACAGATAACCAATCACCGTCCTTTGTTTCTAA
TAACAACCCATCCAAATATTTGTCACACCCGGCCCAATCAGGCACCCTGC
CGATGTATGAAGCAGTGTATCCACAAGGAATGAATGGTGAGCGAGACGAG
AACAACAACGACCCATCTGATGAAAACAGACACAACATCAAACGTATGAA
ACTCGAAAGTGATCACCAACCCAACGATCCAAACAAACTGCATCCCAACT
CTCATATCAATGGTCAATACACAGATAACCAATCACCGTCCTTTGTTTCT
AATAACAACCCATCCAAATATTTGTCACACCCGGCCCAATCAGGCACCCT
GCCGATGTATGAAGCAGTGTATCCACAAGGAATGAATGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000250_pilon | genome | sc0000250_pilon:71052..73968 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 844-1095:2666 |
| Aaloc | 547-843:1907 |
| Aaloc | 460-546:1543 |
| Aaloc | 325-456:1161 |
| Aaloc | 64-324:614 |
| Aaloc | 1-63:1 |
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