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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000373_pilon:101162..103351+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013339 ID=XLOC_013339|Name=XLOC_013339|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2190bp|location=Sequence derived from alignment at sc0000373_pilon:101162..103351+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGAATGGCTATCACAGCGTTCCACTAGCATCAGAGTCATGCGAAGCTAC
CACCTTTATCACCGAATGGGGACGCTATCGCTACAAGCGCGCTCCACAAG
GCTTCCATGGCTCAAACGATGGTTATACTAAAAGATTTGATGATATAACT
GTCGATTTTCCCCGTACCGTAAGATGTATTGATGACTCACTACTGCATGA
TAATGACATTTCGAACTCCTTTTGGCACATCATAGCATACATTGAACTCT
GCGCACGTAACGGGATCGTATTTAACcccgaaaaattcaaattcgCACGC
GACACCACTGAATTTGCTGGCTTCGATGTCACACCTGAAGGTTTCAGACC
TACCGAGAGGATCATGAAAGCGATTCTCGAATTCCCTACGCCAAAGAACA
TATCCGACATCCGATCATGGTTCGGTCTAGTTGCACAAGTATCCTACGCA
TTCGCCCAAGCTCCCGTGATGGCACCATTCCGAGAGCTCCTAAGTAAAAA
GACCCCGTTTTACTGGGACGAGACACTTCAATCGCTATTCGACAAAACCA
AACACGTGATTATCGATTCGATCAAGGACGGAGTGCAGTCATTCTCTACA
AACAAAACAACATGCCTCGCTACCGATTGGAGTAAAACCGGAATAGGTTT
CACGTTAACCCAGAAACACTGCCAATGCATCGGTAAAGACCCGTTGTGCG
GACCCGGACACTGGCGTATGATATATGCCGGTTCTAGATTCACCACTGAA
GCAGAAAGCAACTACGCCCCAATTGAAGGTGAAGCCCTCGCCCTGTTATT
TGGACTTGAAAGCTGTCGCATGTTTGTGCTAGGGTGTCCAGACCTCTTAA
TCGCAGTTGACCACGAACCGCTCGTACCGATTTTTAACGACAAAGACCtc
gaaaaaattaagaacatcagaCTCTTGAAAATCCGAGAAAAAACACTCCA
CTACCAATTCGTCGTGAAAGCGATCCCAGGGGTGAAAAACATCGGACCGA
ATACAGCATCAAGAATCCCACCTGTTGTCAGCTCAAAAGTAGGCTCAATC
GAAGAGCCACTCCCGACTACATCCCCAGACGACACTATCGTGTCATCAAT
CAACTTTGATACCATTATCAACCATGCGAGCAAAGATGAACAGTATAATC
AGTTAGTCTCGCTTATCAAAGAAGGCTTCCCCGATGATAAAACCGCAACT
CCAAAAGCCTTATACGACTTCTGGCCGCTCCGTAAAGAACTCTATACCTT
ACAGAACATAGTGTTTATTGCAAACAAGCCATTGATTCCAAAATCTCTCA
GACGAAACATCCTACACGAACTGCACCTCGGTCATCAAGGTGTATCAATG
ATGAAGTCCAATGCCCGCCAACGATTCTTTTGGCCACACATGAATGCAGA
CATCAACAGCACCCGTTTGAACTGTCAACGCTGCAACCAAACAGCACCCT
CCCAACCAAAAGCACCACTACAACAAAGCGAAGACCCCGAATATCCATTC
CAACAAACAGTAACCGACCTCCTTCACATGGTTGGACACAACTTCATCAT
TTACGCAGACCGTTTTTCTGGCTGGACTGAAGTCGCGGACGCTAAACAAT
CCAACGCCACCGCCATACGCAACACCTTGCGTCGATACTTTGAGACGTTT
GGTGTACCTGAGGAGATTTCATCGGATGGGGGCCCACCATTCAATTCTAA
CGAATACGCCACTTTTCTTAAAGATTGGAACGTAACCCATCGTCTTTCAT
CCGCCTATTACCCCCAAAGCAACGGGAGAGCTGAAGCAGCCGTTAAGACC
ATTAAGCGTATCCTCACCACCAATGTCAGCAGCACTGGATCGCTGGACAC
TGATGCCGTTGCCAAGGCTCTTCTTCTGCACAGGAACACGCCATCACCCG
ATATCGGTGCATCCCCCGCAGAGCTCCTTTTTGGCAGACCACTTAACGAC
CATCTACCAAAACCTGTTCCGCCACGGAAAATTTGGTCGGAATTAGCAGA
CGCACGCGAAGAAGCCTTTGCAAAACGCCGTGCCCAAGCATTGAAGCCGC
CAGGAGATCTGTCCCCGCACACACCTTTAGATGTGGGGAGCTCCGTTGCC
ATCCAGAATCAAAATGGTCAACATCCTCTTCGATGGGATCGCACAGGCAT
CATTTCTGAAAGGCTCCCTCATGATCAATATCGTGTACTG Coding sequence (CDS) from alignment at sc0000373_pilon:101162..103351+ >XLOC_013339 ID=XLOC_013339|Name=XLOC_013339|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4380bp|location=Sequence derived from alignment at sc0000373_pilon:101162..103351+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGAATGGCTATCACAGCGTTCCACTAGCATCAGAGTCATGCGAAGCTAC
CACCTTTATCACCGAATGGGGACGCTATCGCTACAAGCGCGCTCCACAAG
GCTTCCATGGCTCAAACGATGGTTATACTAAAAGATTTGATGATATAACT
GTCGATTTTCCCCGTACCGTAAGATGTATTGATGACTCACTACTGCATGA
TAATGACATTTCGAACTCCTTTTGGCACATCATAGCATACATTGAACTCT
GCGCACGTAACGGGATCGTATTTAACcccgaaaaattcaaattcgCACGC
GACACCACTGAATTTGCTGGCTTCGATGTCACACCTGAAGGTTTCAGACC
TACCGAGAGGATCATGAAAGCGATTCTCGAATTCCCTACGCCAAAGAACA
TATCCGACATCCGATCATGGTTCGGTCTAGTTGCACAAGTATCCTACGCA
TTCGCCCAAGCTCCCGTGATGGCACCATTCCGAGAGCTCCTAAGTAAAAA
GACCCCGTTTTACTGGGACGAGACACTTCAATCGCTATTCGACAAAACCA
AACACGTGATTATCGATTCGATCAAGGACGGAGTGCAGTCATTCTCTACA
AACAAAACAACATGCCTCGCTACCGATTGGAGTAAAACCGGAATAGGTTT
CACGTTAACCCAGAAACACTGCCAATGCATCGGTAAAGACCCGTTGTGCG
GACCCGGACACTGGCGTATGATATATGCCGGTTCTAGATTCACCACTGAA
GCAGAAAGCAACTACGCCCCAATTGAAGGTGAAGCCCTCGCCCTGTTATT
TGGACTTGAAAGCTGTCGCATGTTTGTGCTAGGGTGTCCAGACCTCTTAA
TCGCAGTTGACCACGAACCGCTCGTACCGATTTTTAACGACAAAGACCtc
gaaaaaattaagaacatcagaCTCTTGAAAATCCGAGAAAAAACACTCCA
CTACCAATTCGTCGTGAAAGCGATCCCAGGGGTGAAAAACATCGGACCGA
ATACAGCATCAAGAATCCCACCTGTTGTCAGCTCAAAAGTAGGCTCAATC
GAAGAGCCACTCCCGACTACATCCCCAGACGACACTATCGTGTCATCAAT
CAACTTTGATACCATTATCAACCATGCGAGCAAAGATGAACAGTATAATC
AGTTAGTCTCGCTTATCAAAGAAGGCTTCCCCGATGATAAAACCGCAACT
CCAAAAGCCTTATACGACTTCTGGCCGCTCCGTAAAGAACTCTATACCTT
ACAGAACATAGTGTTTATTGCAAACAAGCCATTGATTCCAAAATCTCTCA
GACGAAACATCCTACACGAACTGCACCTCGGTCATCAAGGTGTATCAATG
ATGAAGTCCAATGCCCGCCAACGATTCTTTTGGCCACACATGAATGCAGA
CATCAACAGCACCCGTTTGAACTGTCAACGCTGCAACCAAACAGCACCCT
CCCAACCAAAAGCACCACTACAACAAAGCGAAGACCCCGAATATCCATTC
CAACAAACAGTAACCGACCTCCTTCACATGGTTGGACACAACTTCATCAT
TTACGCAGACCGTTTTTCTGGCTGGACTGAAGTCGCGGACGCTAAACAAT
CCAACGCCACCGCCATACGCAACACCTTGCGTCGATACTTTGAGACGTTT
GGTGTACCTGAGGAGATTTCATCGGATGGGGGCCCACCATTCAATTCTAA
CGAATACGCCACTTTTCTTAAAGATTGGAACGTAACCCATCGTCTTTCAT
CCGCCTATTACCCCCAAAGCAACGGGAGAGCTGAAGCAGCCGTTAAGACC
ATTAAGCGTATCCTCACCACCAATGTCAGCAGCACTGGATCGCTGGACAC
TGATGCCGTTGCCAAGGCTCTTCTTCTGCACAGGAACACGCCATCACCCG
ATATCGGTGCATCCCCCGCAGAGCTCCTTTTTGGCAGACCACTTAACGAC
CATCTACCAAAACCTGTTCCGCCACGGAAAATTTGGTCGGAATTAGCAGA
CGCACGCGAAGAAGCCTTTGCAAAACGCCGTGCCCAAGCATTGAAGCCGC
CAGGAGATCTGTCCCCGCACACACCTTTAGATGTGGGGAGCTCCGTTGCC
ATCCAGAATCAAAATGGTCAACATCCTCTTCGATGGGATCGCACAGGCAT
CATTTCTGAAAGGCTCCCTCATGATCAATATCGTGTACTGTGGAATGGCT
ATCACAGCGTTCCACTAGCATCAGAGTCATGCGAAGCTACCACCTTTATC
ACCGAATGGGGACGCTATCGCTACAAGCGCGCTCCACAAGGCTTCCATGG
CTCAAACGATGGTTATACTAAAAGATTTGATGATATAACTGTCGATTTTC
CCCGTACCGTAAGATGTATTGATGACTCACTACTGCATGATAATGACATT
TCGAACTCCTTTTGGCACATCATAGCATACATTGAACTCTGCGCACGTAA
CGGGATCGTATTTAACcccgaaaaattcaaattcgCACGCGACACCACTG
AATTTGCTGGCTTCGATGTCACACCTGAAGGTTTCAGACCTACCGAGAGG
ATCATGAAAGCGATTCTCGAATTCCCTACGCCAAAGAACATATCCGACAT
CCGATCATGGTTCGGTCTAGTTGCACAAGTATCCTACGCATTCGCCCAAG
CTCCCGTGATGGCACCATTCCGAGAGCTCCTAAGTAAAAAGACCCCGTTT
TACTGGGACGAGACACTTCAATCGCTATTCGACAAAACCAAACACGTGAT
TATCGATTCGATCAAGGACGGAGTGCAGTCATTCTCTACAAACAAAACAA
CATGCCTCGCTACCGATTGGAGTAAAACCGGAATAGGTTTCACGTTAACC
CAGAAACACTGCCAATGCATCGGTAAAGACCCGTTGTGCGGACCCGGACA
CTGGCGTATGATATATGCCGGTTCTAGATTCACCACTGAAGCAGAAAGCA
ACTACGCCCCAATTGAAGGTGAAGCCCTCGCCCTGTTATTTGGACTTGAA
AGCTGTCGCATGTTTGTGCTAGGGTGTCCAGACCTCTTAATCGCAGTTGA
CCACGAACCGCTCGTACCGATTTTTAACGACAAAGACCtcgaaaaaatta
agaacatcagaCTCTTGAAAATCCGAGAAAAAACACTCCACTACCAATTC
GTCGTGAAAGCGATCCCAGGGGTGAAAAACATCGGACCGAATACAGCATC
AAGAATCCCACCTGTTGTCAGCTCAAAAGTAGGCTCAATCGAAGAGCCAC
TCCCGACTACATCCCCAGACGACACTATCGTGTCATCAATCAACTTTGAT
ACCATTATCAACCATGCGAGCAAAGATGAACAGTATAATCAGTTAGTCTC
GCTTATCAAAGAAGGCTTCCCCGATGATAAAACCGCAACTCCAAAAGCCT
TATACGACTTCTGGCCGCTCCGTAAAGAACTCTATACCTTACAGAACATA
GTGTTTATTGCAAACAAGCCATTGATTCCAAAATCTCTCAGACGAAACAT
CCTACACGAACTGCACCTCGGTCATCAAGGTGTATCAATGATGAAGTCCA
ATGCCCGCCAACGATTCTTTTGGCCACACATGAATGCAGACATCAACAGC
ACCCGTTTGAACTGTCAACGCTGCAACCAAACAGCACCCTCCCAACCAAA
AGCACCACTACAACAAAGCGAAGACCCCGAATATCCATTCCAACAAACAG
TAACCGACCTCCTTCACATGGTTGGACACAACTTCATCATTTACGCAGAC
CGTTTTTCTGGCTGGACTGAAGTCGCGGACGCTAAACAATCCAACGCCAC
CGCCATACGCAACACCTTGCGTCGATACTTTGAGACGTTTGGTGTACCTG
AGGAGATTTCATCGGATGGGGGCCCACCATTCAATTCTAACGAATACGCC
ACTTTTCTTAAAGATTGGAACGTAACCCATCGTCTTTCATCCGCCTATTA
CCCCCAAAGCAACGGGAGAGCTGAAGCAGCCGTTAAGACCATTAAGCGTA
TCCTCACCACCAATGTCAGCAGCACTGGATCGCTGGACACTGATGCCGTT
GCCAAGGCTCTTCTTCTGCACAGGAACACGCCATCACCCGATATCGGTGC
ATCCCCCGCAGAGCTCCTTTTTGGCAGACCACTTAACGACCATCTACCAA
AACCTGTTCCGCCACGGAAAATTTGGTCGGAATTAGCAGACGCACGCGAA
GAAGCCTTTGCAAAACGCCGTGCCCAAGCATTGAAGCCGCCAGGAGATCT
GTCCCCGCACACACCTTTAGATGTGGGGAGCTCCGTTGCCATCCAGAATC
AAAATGGTCAACATCCTCTTCGATGGGATCGCACAGGCATCATTTCTGAA
AGGCTCCCTCATGATCAATATCGTGTACTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000373_pilon | genome | sc0000373_pilon:101162..103351 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2190:1 |
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