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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000453_pilon:110511..113033- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013304 ID=XLOC_013304|Name=XLOC_013304|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2523bp|location=Sequence derived from alignment at sc0000453_pilon:110511..113033- (Clytia hemisphaerica_ch_hm2_pilon)
TTAAGTAAAACTTTTACAAACTATAAAAATATGGTTGAAACAAAAGAACT
GATTGCAGACCGAGATTGGTTGATCAAAGCTTGTGCTCTAATGAAGAAAC
GGTACGAAGAACAATCTAAACTTGTTAAACAAAACAAACAAAATTTGATC
GATAATGAAGCCATCTTTATTAACCATGTTGTGATGAAAAGACGTTTTGT
TATCAGTTACATCCAACCTTTTCATGGATGTGTAGATGAAATGGTGTTTG
AGGAGTTGTCTCCTTTCGTCAATCCTAATCAATTCAAGAATGGAGTGCTT
GTTGTCAGTAGTAAGCTTTTACATCATACTTAAATTATTTGCATTATTTA
GATTATCTAAATGCACACAGTTTTTTAAACGCCGAGAGGCTGAAATTCAG
TCCAGAGAATTGATCCCTGAAAACTGCCCCTCAAGGAAAGTTGCTATAAA
TATCCTGAAAATTCTGCTTGAATCCCCTAATGATTTAATAGTAGTACATT
GAAATATTTGTCTCTTTTTACGATTCATTTTATTTTGTTTAGTACTTTCA
CATTTTTCCCTCCCGGGGTCAGATCTTTGATATTTAACATAGTATAATTA
GCATAAACTGAATCTCACTAATGAGGGCTACAGTATGCCAAAAAATCAGA
AGCAGATTTTCTTTGTTATTATAATAAAATTGGTTCAATGATATTTTTCC
TAAGATGAAGCAAATGTGAAAAAAAAGACTTTTCAGTATCTTATCATCTT
GTTTATTTTATAGAATACCCCTCGACTTCATTGACGAATGGCAGTCATTT
TAATGGTGACGCTTTTGAAGACACACTCAATGAAACAAATCAAAACTTCC
CTACCATCAACACCATCCAGATACTGTGTGAAGCAAAAGAATTCATTAAT
TGTGGAACTATTTTCTCAGCATCAGAAATATATGCTTTGGGAAAGAAAAG
TTTTCACGGAATGCTAGGCCCGTTAAAGAAATGTTTCCTCAGCCTATCAG
GATTGGAACGGCTTTCTATCTCAGAATCTAGATACATGAGCTCGTTAATT
ACCCAAGTGACAAAATCTGCTTTTGAGGCTGTCAAAGATAAACTAACCAT
TCTGTATTGCGAGCCATCAAAACCTTTGTATGTTCGAATGTTGTTATTAT
GCCCTCAAACAATTGGGGAGAAGAACTCTGTTCGTATTTTGCAAATTCGT
GATGATGACGGGAGAGCCACCAAGAAATCAAGAGCTTGTTTTGAAGAAGG
GAGCTACACTGCAAGCTACGACATATTGAAAGGCCTTGTTGTAGATAATA
CTACTGCAAATAAAGATGTCACCTCCCTTAAAGCTATATTCTGTTGGCCA
ACTTCTAAAAATCAAATGGATTCTCAGCCACCACACTCTAGTAAGTCTAT
CCTACAAGTTCAAGTGGCTCTTGGTGAACAGCAGTCTCCATTAAATGATA
TTTTCTTGGAATTAACCAACCTCGATTCAATTGCAAATACGACATTGAAT
GAGTTATCAAATAGCAGTGACAACTCAATGTCGTTAGAAATGACCACCAT
GTACGAGAATTTATCAGTTTTCAAAGAAACTGTCTCCAGTTTTTCACTTT
ATAATGAAAACAAGGAAGAACAATCTGGTAAAGATGGAAACATTGCTGAC
GAGGATGAGGATGATGACCTTGAGAAACCAATGACTCAACTCTTACGTGA
AAAACTGGTCCGTAGAGACCACGATTTCACTGACAAGCTATGGATGTTCC
TTAGGAATTCACATAATGGAGAAGAGATGAAATTTTATCTTGAAGATGTC
ATCAATGATATAGTTCATGGTTCCTTACAGCCTGCCATTAGTCCCATCAA
TTCAACTAAATTAGCCAAGCTGGTCCGCAAAATGTACACAGAGGAAAGCG
AGGAAACTAAGTATCCAATCAAGGAGAAAATTCTGGAATTTCTTTCCAAT
GATGCATCTGTAGTTAATCTTATTGTTGAGATTGGTTTCGAGAAGTTACG
AAAAGATTATTATCATTATTTCCTGACCAACGAGCTAACTATAGCATCCT
CAATGGATAAAATGCGTGGTAAGCAACAGATGGGCTTTAACAACCATGCT
TCTAGTATTGCGTTTCTATGGAAACTACATTGCTGCTTGGAGATTGTCAC
AACGCCAACCGTTTACCTAAGCCTTGATCACGATAGCCAGAGAAGTTTGT
TAAACGCCGCTTTAGACTATTATACACAACACAAAGTGCAATCGACAAGC
CCTAAATTTTGTTTGTCACTTTTACCTGTTCACGATACTTTAGCGAATGT
TTTGAATTCGTGTACGTCTCGGTTACCGGATCATTGGAAAGAGGGGATTC
TTCGTACCAACAAAGCTGGGATACAGGAATCATGTATTGTTTCACAATCG
AACTCTAATAATAATGCTGGTGATGAGTTGACGTCAGCTTCGGTTACCTC
CACAAGTGAAATTGATAAAGATATGAAAGTTGGAATCGTGCTAAATGAAA
GTGTCATTGAGCTACCTCAATAA Coding sequence (CDS) from alignment at sc0000453_pilon:110511..113033- >XLOC_013304 ID=XLOC_013304|Name=XLOC_013304|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4140bp|location=Sequence derived from alignment at sc0000453_pilon:110511..113033- (Clytia hemisphaerica_ch_hm2_pilon)
TTAAGTAAAACTTTTACAAACTATAAAAATATGGTTGAAACAAAAGAACT
GATTGCAGACCGAGATTGGTTGATCAAAGCTTGTGCTCTAATGAAGAAAC
GGTACGAAGAACAATCTAAACTTGTTAAACAAAACAAACAAAATTTGATC
GATAATGAAGCCATCTTTATTAACCATGTTGTGATGAAAAGACGTTTTGT
TATCAGTTACATCCAACCTTTTCATGGATGTGTAGATGAAATGGTGTTTG
AGGAGTTGTCTCCTTTCGTCAATCCTAATCAATTCAAGAATGGAGTGCTT
GTTGTCAGTATTAAGTAAAACTTTTACAAACTATAAAAATATGGTTGAAA
CAAAAGAACTGATTGCAGACCGAGATTGGTTGATCAAAGCTTGTGCTCTA
ATGAAGAAACGGTACGAAGAACAATCTAAACTTGTTAAACAAAACAAACA
AAATTTGATCGATAATGAAGCCATCTTTATTAACCATGTTGTGATGAAAA
GACGTTTTGTTATCAGTTACATCCAACCTTTTCATGGATGTGTAGATGAA
ATGGTGTTTGAGGAGTTGTCTCCTTTCGTCAATCCTAATCAATTCAAGAA
TGGAGTGCTTGTTGTCAGTAAATACCCCTCGACTTCATTGACGAATGGCA
GTCATTTTAATGGTGACGCTTTTGAAGACACACTCAATGAAACAAATCAA
AACTTCCCTACCATCAACACCATCCAGATACTGTGTGAAGCAAAAGAATT
CATTAATTGTGGAACTATTTTCTCAGCATCAGAAATATATGCTTTGGGAA
AGAAAAGTTTTCACGGAATGCTAGGCCCGTTAAAGAAATGTTTCCTCAGC
CTATCAGGATTGGAACGGCTTTCTATCTCAGAATCTAGATACATGAGCTC
GTTAATTACCCAAGTGACAAAATCTGCTTTTGAGGCTGTCAAAGATAAAC
TAACCATTCTGTATTGCGAGCCATCAAAACCTTTGTATGTTCGAATGTTG
TTATTATGCCCTCAAACAATTGGGGAGAAGAACTCTGTTCGTATTTTGCA
AATTCGTGATGATGACGGGAGAGCCACCAAGAAATCAAGAGCTTGTTTTG
AAGAAGGGAGCTACACTGCAAGCTACGACATATTGAAAGGCCTTGTTGTA
GATAATACTACTGCAAATAAAGATGTCACCTCCCTTAAAGCTATATTCTG
TTGGCCAACTTCTAAAAATCAAATGGATTCTCAGCCACCACACTCTAGTA
AGTCTATCCTACAAGTTCAAGTGGCTCTTGGTGAACAGCAGTCTCCATTA
AATGATATTTTCTTGGAATTAACCAACCTCGATTCAATTGCAAATACGAC
ATTGAATGAGTTATCAAATAGCAGTGACAACTCAATGTCGTTAGAAATGA
CCACCATGTACGAGAATTTATCAGTTTTCAAAGAAACTGTCTCCAGTTTT
TCACTTTATAATGAAAACAAGGAAGAACAATCTGGTAAAGATGGAAACAT
TGCTGACGAGGATGAGGATGATGACCTTGAGAAACCAATGACTCAACTCT
TACGTGAAAAACTGGTCCGTAGAGACCACGATTTCACTGACAAGCTATGG
ATGTTCCTTAGGAATTCACATAATGGAGAAGAGATGAAATTTTATCTTGA
AGATGTCATCAATGATATAGTTCATGGTTCCTTACAGCCTGCCATTAGTC
CCATCAATTCAACTAAATTAGCCAAGCTGGTCCGCAAAATGTACACAGAG
GAAAGCGAGGAAACTAAGTATCCAATCAAGGAGAAAATTCTGGAATTTCT
TTCCAATGATGCATCTGTAGTTAATCTTATTGTTGAGATTGGTTTCGAGA
AGTTACGAAAAGATTATTATCATTATTTCCTGACCAACGAGCTAACTATA
GCATCCTCAATGGATAAAATGCGTGGTAAGCAACAGATGGGCTTTAACAA
CCATGCTTCTAGTATTGCGTTTCTATGGAAACTACATTGCTGCTTGGAGA
TTGTCACAACGCCAACCGTTTACCTAAGCCTTGATCACGATAGCCAGAGA
AGTTTGTTAAACGCCGCTTTAGACTATTATACACAACACAAAGTGCAATC
GACAAGCCCTAAATTTTGTTTGTCACTTTTACCTGTTCACGATACTTTAG
CGAATGTTTTGAATTCGTGTACGTCTCGGTTACCGGATCATTGGAAAGAG
GGGATTCTTCGTACCAACAAAGCTGGGATACAGGAATCATGTATTGTTTC
ACAATCGAACTCTAATAATAATGCTGGTGATGAGTTGACGTCAGCTTCGG
TTACCTCCACAAGTGAAATTGATAAAGATATGAAAGTTGGAATCGTGCTA
AATGAAAGTGTCATTGAGCTACCTCAATAAAATACCCCTCGACTTCATTG
ACGAATGGCAGTCATTTTAATGGTGACGCTTTTGAAGACACACTCAATGA
AACAAATCAAAACTTCCCTACCATCAACACCATCCAGATACTGTGTGAAG
CAAAAGAATTCATTAATTGTGGAACTATTTTCTCAGCATCAGAAATATAT
GCTTTGGGAAAGAAAAGTTTTCACGGAATGCTAGGCCCGTTAAAGAAATG
TTTCCTCAGCCTATCAGGATTGGAACGGCTTTCTATCTCAGAATCTAGAT
ACATGAGCTCGTTAATTACCCAAGTGACAAAATCTGCTTTTGAGGCTGTC
AAAGATAAACTAACCATTCTGTATTGCGAGCCATCAAAACCTTTGTATGT
TCGAATGTTGTTATTATGCCCTCAAACAATTGGGGAGAAGAACTCTGTTC
GTATTTTGCAAATTCGTGATGATGACGGGAGAGCCACCAAGAAATCAAGA
GCTTGTTTTGAAGAAGGGAGCTACACTGCAAGCTACGACATATTGAAAGG
CCTTGTTGTAGATAATACTACTGCAAATAAAGATGTCACCTCCCTTAAAG
CTATATTCTGTTGGCCAACTTCTAAAAATCAAATGGATTCTCAGCCACCA
CACTCTAGTAAGTCTATCCTACAAGTTCAAGTGGCTCTTGGTGAACAGCA
GTCTCCATTAAATGATATTTTCTTGGAATTAACCAACCTCGATTCAATTG
CAAATACGACATTGAATGAGTTATCAAATAGCAGTGACAACTCAATGTCG
TTAGAAATGACCACCATGTACGAGAATTTATCAGTTTTCAAAGAAACTGT
CTCCAGTTTTTCACTTTATAATGAAAACAAGGAAGAACAATCTGGTAAAG
ATGGAAACATTGCTGACGAGGATGAGGATGATGACCTTGAGAAACCAATG
ACTCAACTCTTACGTGAAAAACTGGTCCGTAGAGACCACGATTTCACTGA
CAAGCTATGGATGTTCCTTAGGAATTCACATAATGGAGAAGAGATGAAAT
TTTATCTTGAAGATGTCATCAATGATATAGTTCATGGTTCCTTACAGCCT
GCCATTAGTCCCATCAATTCAACTAAATTAGCCAAGCTGGTCCGCAAAAT
GTACACAGAGGAAAGCGAGGAAACTAAGTATCCAATCAAGGAGAAAATTC
TGGAATTTCTTTCCAATGATGCATCTGTAGTTAATCTTATTGTTGAGATT
GGTTTCGAGAAGTTACGAAAAGATTATTATCATTATTTCCTGACCAACGA
GCTAACTATAGCATCCTCAATGGATAAAATGCGTGGTAAGCAACAGATGG
GCTTTAACAACCATGCTTCTAGTATTGCGTTTCTATGGAAACTACATTGC
TGCTTGGAGATTGTCACAACGCCAACCGTTTACCTAAGCCTTGATCACGA
TAGCCAGAGAAGTTTGTTAAACGCCGCTTTAGACTATTATACACAACACA
AAGTGCAATCGACAAGCCCTAAATTTTGTTTGTCACTTTTACCTGTTCAC
GATACTTTAGCGAATGTTTTGAATTCGTGTACGTCTCGGTTACCGGATCA
TTGGAAAGAGGGGATTCTTCGTACCAACAAAGCTGGGATACAGGAATCAT
GTATTGTTTCACAATCGAACTCTAATAATAATGCTGGTGATGAGTTGACG
TCAGCTTCGGTTACCTCCACAAGTGAAATTGATAAAGATATGAAAGTTGG
AATCGTGCTAAATGAAAGTGTCATTGAGCTACCTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000453_pilon | genome | sc0000453_pilon:110511..113033 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 313-2070:1759 |
| Aaloc | 1-309:2524 |
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