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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000238_pilon:116614..120935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013284 ID=XLOC_013284|Name=XLOC_013284|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4322bp|location=Sequence derived from alignment at sc0000238_pilon:116614..120935- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAAAAGATTAGAAAAACTTTTGATCATGTCTACCAATGGAGAGGAAAG
ATGGCAAGCAATCAAATATCAGCCACAAAATCAGAAAAATTTCCATCAAT
GGATACACCAAAAGTTACGAAAATTGAAACAAACTCACCAAAAAAGTTTC
GACGTAATGAATAAGTACTTTCCAGTGGAGAAGACTATGACAGAAAGTAT
GGAAAAGATGACAGATGATGATATCAAAGTCGCAGCAAAAGAATGTGGTT
TCCATCCATCAATTACTGAACTTCTATTAGCAATTCAAACGGATCCAATC
ATACACATGTTTTTTCATCACATGTATGAACAACAAACAGTTCATCTACC
ACCAGGAAAACTGTGCATCCAGTCCTGGCAAGAGGCATTAATTGTTATCA
ACGAATGTATAAATGAAGCTATTGAATTTGATCATGAAAATCCAATCACT
GCACCACTGTATTGTATTTTCAGTAGCCCAATAGCAACACCAGTTGGAAA
TACCTGTTTTTTGCATGAAAAAGTGAATGCTTTGATGAAGGAAATTTTGA
TTGAATGGGGTAAGTACTTAACAAGCAAATCTTCTTGTTACGTATTAACT
GATGCACCTAAAGGTTGGTTCAGCATTAAAGCCCTAGAAGCCATGCCGAA
TTTCAATGAAACATATGTCTGCGATCCATCAAAGCCTTTTTGGGGTTTCA
CTTCTTGGGACGATTTTTTTGTTCGCAAGTTTAAAGATGGAGCAAGATCA
GTGGATGATGAAGAAGATGATTGCATAATTGTTAATCCATGCGAAGCAAC
CCCTTACAAAGTTAAATGGAACGTCAAAAAGTATGATCAATTTTGGATAA
AGGAACAAAATTATTCTATGGAGTTCGTCTTGAATAAGAACCCATTGGCA
GCTGCTTTTAATGGGGGAACAATTTATCAGGGCTTATTATGCGCTACCAA
TTATCATAGATTTCATAGCCCTGTTAATGGCATTATCCACCATCTCGATT
TGGTTGAAGGAAGTTATTTTTCACAACCGTACATAGAAGGTGGATATCCA
ATCTTGAGAGACGTACTACCATACTTAGCGCATGTCGCAACAAGAGGAAT
CTTTTATATCAAAGCCGACAATCCAAATATTGGTTTGATTGCGTTTATAG
CAGTTGGAATGACTGAAGTATCAACAGTTGAAATGACAGTAAAAGTTGGA
GATCGCGTGAAAAAGGGTCACGAAATCGGAATGTTTCATTATGGAGGATC
GAACTTCCTGTTAGTTTTTAGAGGGGAAGTTAACATCAAATTCGATGACC
AATTATTGCAAGGCTTAAATTCTGGTAACATCAAATTGAATAAACGAATT
GGCCATGTTCTTGCACCTGAAATAAAATAACAAGAAGGCGCCTTATGATG
AAAAACTTTATAAAATCCTAGAAATATTCTTATCTTCATATTCATTTATC
ATTTATTGTTAATCTAATTTATTAATTTAATCTTTTTAATTTAATTCTTT
TCAGGTGAAGAGCCAAATGTAAATTTTGGAAATGCCAGAAATATATCATT
ATTATTATTATTGTTATCTCAGGAGTAAATATTAGAGGAAATATGACGTC
AAAATTAGTGAAACAACTCAATCCGAAAGTGAACCTCGGTTGTTCGTAAA
ATGATATAATTTCAAAAGTATGGTCAATAATTTAACATATCTTACTTTAT
ATTGATATAGAATTTGTAATTCATGAATATAAAAGAATTGTTTTTAAATT
TTCTCAGCAATACTAGTAGTTTCATGTTATTCACGATCATCAGTTGATTT
GAAATGACTATAAAGGCCGGTCGGTCTCCACAGGTTTTTTCCAAACATAC
CACTATAGAAATTGATTAAAGGATACTAAGCTCTAATTTAGTTTAGACGG
TTGACTTTCTGCCTTGTCTCCGTTCGATCTGAGCGAAGGCAGAAAATCGA
CAAAAAGTCGGCAGTTAAAATCTTTGCTTGGAAAAGGTTGAAAGAAGTCC
ATTGTATTGACGTCAAAAGATGTCATTACATTGGCTTTAGACGTCGACTT
TCTGCCGACTTTCGTTTGAAATGAACGGAGGCAAGGCATAAAGTCGACCG
TCTAAACTAGAGCTAAAACACAATAGACCTCTCTTCTGTTCATATCCACC
ATCATCTTGAATTGTATGCAGAAATGTGCAGCACGAATTTGCCGTAGTGA
GTTTTGCTAAGGAAAATATGCAAAATCTATGCAAGTTTTATAAGGATTCT
TAACTCTATAGGTGATATAACCTTGAAATAAAAGCATTATGCAGAAATAA
AATTCAAATTTATTTTTCTGACTTCACTTTAAACAGATTTGTTTAAATTG
CGAAAATTTGAACCCGCGAAATACAATTTTATCAAAAGAATTGAAAAATA
CCTGGGAAGATGAAAGAAATTTGTCTAAAAAAGGGCAAATGCGAAATGCA
ATTTTTTCAATTTTTTTTTCGACCGTGAAGATTAGTTCCAGCGAAAATTA
GTTCCCTTAAGGTATAGGCGTAGCCACGTAAAAAGACTAAAATGAAAATC
ATTGGTCTGATCTTGAAAGTGTTTCCGTTAAATTCTTTCCCGCAATCAAG
CCGGTCCGGGTTTTGATTTTCCTACCCAACGTAAGCCGTATTCCAAGTCC
CTTCACGGGTTTAATCGGGGAAACAAAAAACTCTGATCAATCTCTTATTC
CGACATTTGAAATTTTTAAGTACTTTAGTTAGATTTAACGCTATTACGAC
TTCAGGAAACAAAATTATTGCAGAATCCATGATCGAGAAAGTCTGCGAAG
AAAGCCATTAAGATTAAGTCCATTAAAAAAAGCAAACGATTCATTCCAAT
TCTTATACTCAACATTTTGAAGTCAAAACTTTTGGGTCGTTAAAATCTAA
TTTAAAAAAGAAACCATCTAATGTAAAATCGAGAAATTAACGCGCGTTCT
TTTGTTTTGATACTTGGTTTGATTAACTGAATGTTTTTGCAAGCTTAGCA
TTCTTGAAGCAGTGATTCAGACTAGTGCACCCTGGAAGAAACTACTTTTT
TCTTTGTATTAGCGCTTTGCTTTTTTAAAACCTACCTTTTTATATTTTTA
GAGTAAAAATATGGAAAGAAAAAAATAACCAAAATGGCGACTATCAACAT
GAAAAATAAAAATCAAAAAAATGGTGAAACTTCGAAACCCGAAAAATTTG
ATCGTGTAGTTGGTATTACGTCAGCATTTTTGACAGCTTTTTTCTTTAAT
TTCCTTTCTTGCTGTGCAAGGTATGTATTCACAAAGAATCCTACAGTCCA
GTTGTCTGGTCCACAATTAACCTTCATTCGTGGATTTGTGCAACTGATAA
TGATTGGTGTAGTGATGGCCTTTACTAAAACATTCCCTTTTCAAAACCCA
AACGATTTATTACCACTATTTCTGTCTGGATGTATAAAAGCTACAGCCTC
TATATTTTGTTTTACTGCATTAAAAGGTGTTAGCGTAGGCACCGTATGTA
TCATTGAATCGACTACCCCTGCTGTTGCATTTTTATTTGGATTCGTATTC
CTTAAAGAAAAGTGTAGCATGTTAAATGGTATTTTGGGCCTTCTTACATT
TGTTGGTATCGTTATTGTTATGGTTCCGAATATCATCTTTCCTGTCAAAA
CCAATTATATCAAAGGCTATACTAGCTCTGTGGAGCGATATTTACTTGGT
GCAGCGTCTGCTTTTGCTGGTGTTTTACTTCGGTGTACATTCAAGACTGT
AAGTAGAATTCTAATGATGAAAACTATGGACTATAAATTGTTTGTCCTGT
ATCCAAGTATTGCTATGTTGGTTCTGTCACCATTGACGATGTTAATTCAG
CAAGACTATTTGATCACAACTGAATTGCCACTATCAAGTTGGTTGATATT
AATCGTTATTGGAATATCTGGATTTCTTGGTAATTTGTTTAGTGTAATTG
CTTTGAAACATGAACACGTTAGTATTGTGGCTTTCGTGGCATCAACAGAA
ATTCTGTTTGCTTATTGTTATGATTTGTGGCTTGCACACGAGGCTCCAAA
TCCTTATTCATGGATCGGAATCATAACAGTGGTGTTGTGTTCAACATTAG
TTATGCTGAACAGAATATTTGACTTTGAGAATAAAATAGACTGTTGTAAA
AGAAACAGCAAGATTCACAAAGATGCGAAAAGTGTGGAAAATACTTAGAT
GTTTTACTTGCAAGCGTTTCAATCTCTCTATATCCTTTTTCCTGTCATTT
CGTGACCTACTTATACACCCTATGTCGCATCCACAGTACGATAGTCCTAG
GGATCGATCGATAGATATTTAA Coding sequence (CDS) from alignment at sc0000238_pilon:116614..120935- >XLOC_013284 ID=XLOC_013284|Name=XLOC_013284|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=794bp|location=Sequence derived from alignment at sc0000238_pilon:116614..120935- (Clytia hemisphaerica_ch_hm2_pilon)
ATAAAAAGATTAGAAAAACTTTTGATCATGTCTACCAATGGAGAGGAAAG
ATGGCAAGCAATCAAATATCAGCCACAAAATCAGAAAAATTTCCATCAAT
GGATACACCAAAAGTTACGAAAATTGAAACAAACTCACCAAAAAAGTTTC
GACGTAATGAATAAGTACTTTCCAGTGGAGAAGACTATGACAGAAAGTAT
GGAAAAGATGACAGATGATGATATCAAAGTCGCAGCAAAAGAATGTGGTT
TCCATCCATCAATTACTGAACTTCTATTAGCAATTCAAACGGATCCAATC
ATACACATGTTTTTTCATCACATATAAAAAGATTAGAAAAACTTTTGATC
ATGTCTACCAATGGAGAGGAAAGATGGCAAGCAATCAAATATCAGCCACA
AAATCAGAAAAATTTCCATCAATGGATACACCAAAAGTTACGAAAATTGA
AACAAACTCACCAAAAAAGTTTCGACGTAATGAATAAGTACTTTCCAGTG
GAGAAGACTATGACAGAAAGTATGGAAAAGATGACAGATGATGATATCAA
AGTCGCAGCAAAAGAATGTGGTTTCCATCCATCAATTACTGAACTTCTAT
TAGCAATTCAAACGGATCCAATCATACACATGTTTTTTCATCACATTTCG
TGACCTACTTATACACCCTATGTCGCATCCACAGTACGATAGTCCTAGGG
ATCGATCGATAGATATTTAATTCGTGACCTACTTATACACCCTATGTCGC
ATCCACAGTACGATAGTCCTAGGGATCGATCGATAGATATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000238_pilon | genome | sc0000238_pilon:116614..120935 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 325-396:73 |
| Aaloc | 310-321:4013 |
| Aaloc | 1-309:4323 |
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