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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000330_pilon:39109..44007+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013277 ID=XLOC_013277|Name=XLOC_013277|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4899bp|location=Sequence derived from alignment at sc0000330_pilon:39109..44007+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTGCTTGGCGATTTTGTCAATTGCAATTACAGGTAACAATTATTC
ATAAACGTCGTTAACCATAGTTGTTGCCCGATTGAGCTGCACTTTGAAGC
GGGTAACAAGCATAGTTATTTTAGGGCCTGCATGTCGGTCACGATGAGCT
TCTTAAAACCCTGTAGAAAATTCACTTGTTACCCTTTTCTGCCAGGATGT
GACCTCTAACTActacttctttttttctcgtTTCAGTTTGTAGCTGCGCA
TCCCTACTCGCCCCTAAAAAGGTATTTCACAGGTCATTCAAATAACTTAG
GGACAAGGATCGGACAAAAACCCGGGGTTATCTGGAAAACAATAAGCAAT
GTTTACTACACATTATTTATTTAGCAGGTTCCTAATTAGGTAAttttttt
CGCTTTCTcgtaatttaaaaaactttcagatAATCTAACCATAGAAAACG
ATAGCCCTTAGCATAGATATGGTACCTGCGCTATCAGggggtcaaagcaa
atttttcagaaggaGACCTATAATGCTAAGCGAAAATTGGAATTGCTTTT
AAATCATGTGTAGGCACCTGATAGCATTGTCTACTCTAACTTTCCTGGGA
AGACTTGATAACTTTAACAACAATCTCACCTTAGGATGGTTTGGGTGGTG
GTAACTTTTTAAACAAACCAGTTGAGAAGCCACGAATTCAAGATGGTAGC
AGTGgggaaatagaaaaaatatctGACGTCAAAACCGTCGACCCTGCACC
TCATAAAGACGCACAATTCGATTCActtataaaacaaatttacGATAAAT
TTTTGACTGTTGGTGGAGAAACGAAAAAAGGTATGTATATCAGTACTCTC
ACAAGTATATATTCATTGGTATTGGTTTTAGATCCCACCCTTTAAATAAT
CATCTTGAAAAATACGTACAATCTCAGTTGTCGTTACCAAAAACAGGCTA
AATCGGTTTTTCTCGAGATGGTCAgcacaaattttgttttcacagcttGt
tattttcgtttttcctctgacgtttttCACGCCACGTcaagaccattgag
tttcaagcctgaagCTCTAGAGgtgagactcctggatgggaaatgaaacc
actcatttcccatccagggaaatgaaaccactcatttcccatccagaacg
cccgcgcgtggtttttacacaaaatccggattgaaactaaaatctattgc
tagatttaaaaaaatgtagtcctccaaaacaaaggaaccgctagatacaa
tctgtcGTCGTGacagggggggtcagtgtactagaaggcggcatgtatgt
gtactacaaggtatttttcaaaacttgacacccacccacccctgaaaAAA
ctcccaaaaccaccccataccctcTATTTACTACCAGGTAGtacctgtaa
aaaaaaaaaccaccccataccccccatttactaccgggtactacctggaa
aaaatcagaaaaccgggtaaacattttttccaaaaatcaggaaatcgggg
aaacttttttcggaaaatcggaaaatcgggaaaacttttttccaaaaatc
ggaaaaacaggaaaaatttttaaaaaaatccaaaatgcgtgagaaaccaa
acttttcaaaaattgcgtgagaccATGTGGAAATGCTTGAGTCTCACAct
caatgcgtgagagttggcacctttGATGTTCGAATATTTGAATTagaatg
ttcgaatgtttacattgactctAAACCTTCCTTTTAGTGGGATCTGGTAG
GATTTcaattaattcaaaaaagtttggaagaatgatcttggacaaacttg
gcttgatcaatttataatagatttctatacatttctattttagcaaaTAA
TTTCTGAGCCTTTTTGTTTCCTTACTGTTAatatcgattttggacccaac
acctctattttggtacacaggtagtaaaaatcaaaatcgattttggaccc
aacacctctattttggtacacaggtagtaaaaatcaaaatcgattttgga
cccaacacctctattttggtacacaggtagtaaaaatcagaaTCGAtgtt
ggacccaacacccctattttggtacacaggtagtaaaaatcaaaatcaat
tttggacccaacaccctaattatagtacacaggtagtacatgacaaattt
ttttctcaaacacccacccaccccaggatacatgccaccttctggtaccc
ccccccctggtcgtgattacggcgcgttctatgcgttTTTTGGATGGGAA
AGAAGTgacttcaatttctcttgcttGAGAAgcttcgcctctagcccttc
gggcttgaaacgcAATGGTAAAGACCTGTTGTCAATTATTCTACATATTT
ATGGATCTAATTTCTCGCCCTGCGTCAATGGTGAAAAAACTTAGATTAAC
ActcaaaatgaacttgaaatgtttttcttaTTGTGAAACTCGTATAATTG
AAAAGGTCCTGACAGAGCAGGACAAAGAATGGCTTATCGACAGCTCTTGA
GCTATGTACacaaaaaaaggtcaaatctGATCTGATCTTTCCAAAAGAAC
CACTTATGAATAATGAGGGTCTGTCCCAACTTTTTATCGAGTGATAATCT
GGTAATCTTTCCTCtttctggatttttttctgTAAGCATCTTTTGCTTTG
ATTAAAGAAAGTGCTCAAGTCAGCAATTTCAATTTGACATGGAATTAATA
TTTCCGTCACTCTCCAATAGAAGGAATAGGGGTTAATCTTGACTTGGACA
AATCGTGAAAAAGTAGCCCAAAATACTACCAACAGTCGACATTTATTTAC
CCACCCCTCTCACTTTGAGATGATCGATTTTTTGCCGAACATGTTTTAGG
GGATGTAGATTTGTCTTATAAGTTATAAGTTGCTTATAAACCAGAAATAT
TGTAAAATTGATTTTCCATCGCTCGTCAAAGGGTTGTTTGTTTACAAACA
CATTTGATGTCAATCTtattaaaagtaaaaacaaaaagtttcaatGTCTC
ATATTTCACAATAATATTGAATGTCTTTAAAAGTCACCGATCCTACCTAA
GCACTCACACAACACTCGACTTTCTGTCTGCACAAAAATAAAACTGTTCT
GTGGATAAAGAAAGCATACTCTACTTTAACCATCACAAAGAATTGCTTTT
AAATTCTTGAACAGACgatcaaaatgaattttatggcaGTTTTCCTTCTA
TGTTTACTGTTGTTTGTAGAAAGCAGTTCGACCCAGCATCAAGTACGCTT
TGGTCCGGATGGCAAAGCATACCCGAAGATGAAGCACGTTCcagcaaaat
ataaaaaagatatcAGTGCAACACAATTTGGTGTAGATGGGAAAGCAAGA
CCGGTCGATTCTCGCATTCCATTGGTCCATCACGATGAGAGAGAGGTTTC
TATGGATGATGTGCTGAACTCCGTCAAAATTTTAGTCGACAAATTGACCG
CCAAAagagatgaagaaaaaaaacaagaacagcAGAAGAAAGAGGTAaaa
tcactttcacttttcGAGCTCCCTCAGTTTTTGCCACTTTGCGCTCGTAT
GATGGAGAAATATCGATAACTTCTATCATTACTTTACTCAAAACTTACCG
TACTAATGTCTTTACTTTGTGGATGCGTTACATTCAATTTCCATCTAGTT
TTTTGCTTTGGATGAGATTTACACATATTACATCCAttcaagaaaatcaa
gaaagaaaCACTAAAGTTTCTTGTCCCGTACTAAGAAAATCCTCCCTGAA
GAGCCATAGGGTCGCTGATTCTGAAAGTACTCTAAGAACCATTGATTTAT
ATTGTCATGTAaccattcttttttcttttagttcaCTTTTGAGAGTGTCC
ACAAGGAAAACGATAAGGAAGAAACTTCAAACGATAACAATGTTTATGAA
GAATATGAAGCACTCAAGAAAAAGTTTCTCGACACTTTCGATAAAAGTCA
CAACGAAAAACGACAAACGCTCATCGGATCCGGTAAAGATAACCATGTCG
AAACCGGTTCTCCACAATCGGGACTTCCAAGTAAACCCGATCACCCGACT
TTGATTGGATCGGGGAAAGACAATAAACGGGAAAAACTTCGATCTCGTTT
AAACGATTTATATGACGAATTACGAAAGGAAACGACCGAAAGACTTGACC
GGGAACGAGAATTAAACGAGAAAAAACGACTGGATTTCGTGAAGAAGGAT
TTAGTGGATTTGTTGAACGGACTTCAATCAAAAGACACTTTTACTTTTCA
CGATGGAAAATTCGGTTTTGATGAGAAGATGATTAACTCAGTTGAGGAGA
CCACGCGTGAAAATAATATTGCTCGCGCGGCCAAAACAACCAAACAGGAA
AGCAAACGTTCCAAGCTAGAAGTCGTTCAATCGTTAGTGAAGGAGTTACA
TGAACTAGAGGagaataaaaaacgagaagtaatgaagaaaaaagaagaag
aagaaaggaCAAGATCTGTCGAACgaatggagaaaatttttatgggtgtt
ttgaagaaagaaatggAGAAACGAAAAGCGGCCGCTGCACAGGAAAAAGA
AGCCGCGCGAATAGAAGAAGAGAAAAAACGGGCTGCCGTGCAAGCTAAGT
TGGAAGCTGATGCACTTAAGAAAAGAGAAAACGAATTAAATACAGGTCGA
GATATGTTGCTAAAGATTATGGGTGATCTTGAAAAACGAGTTGCTaataa
agagaagaaagaaaGCGCATCCACAGGTAAGGATGTCAAGAAAAGCACAA
GTAGCGATTCTATTGAGAAAGAATTAGATAACATcatttcttctttctca
aagaaaattcaaaggAAAGACATTCATGAAAGCGAAATCGATAAAGCGTT
CGAAGGATTCAACATTGatcaaaataaagtgaaaaacaGCAGACCATAG Coding sequence (CDS) from alignment at sc0000330_pilon:39109..44007+ >XLOC_013277 ID=XLOC_013277|Name=XLOC_013277|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3222bp|location=Sequence derived from alignment at sc0000330_pilon:39109..44007+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTGCTTGGCGATTTTGTCAATTGCAATTACAGATGAGGTGCTTGG
CGATTTTGTCAATTGCAATTACAGTTTGTAGCTGCGCATCCCTACTCGCC
CCTAAAAAGTTTGTAGCTGCGCATCCCTACTCGCCCCTAAAAAGGATGGT
TTGGGTGGTGGTAACTTTTTAAACAAACCAGTTGAGAAGCCACGAATTCA
AGATGGTAGCAGTGgggaaatagaaaaaatatctGACGTCAAAACCGTCG
ACCCTGCACCTCATAAAGACGCACAATTCGATTCActtataaaacaaatt
tacGATAAATTTTTGACTGTTGGTGGAGAAACGAAAAAAGGATGGTTTGG
GTGGTGGTAACTTTTTAAACAAACCAGTTGAGAAGCCACGAATTCAAGAT
GGTAGCAGTGgggaaatagaaaaaatatctGACGTCAAAACCGTCGACCC
TGCACCTCATAAAGACGCACAATTCGATTCActtataaaacaaatttacG
ATAAATTTTTGACTGTTGGTGGAGAAACGAAAAAAGAAAGCAGTTCGACC
CAGCATCAAGTACGCTTTGGTCCGGATGGCAAAGCATACCCGAAGATGAA
GCACGTTCcagcaaaatataaaaaagatatcAGTGCAACACAATTTGGTG
TAGATGGGAAAGCAAGACCGGTCGATTCTCGCATTCCATTGGTCCATCAC
GATGAGAGAGAGGTTTCTATGGATGATGTGCTGAACTCCGTCAAAATTTT
AGTCGACAAATTGACCGCCAAAagagatgaagaaaaaaaacaagaacagc
AGAAGAAAGAGAAAGCAGTTCGACCCAGCATCAAGTACGCTTTGGTCCGG
ATGGCAAAGCATACCCGAAGATGAAGCACGTTCcagcaaaatataaaaaa
gatatcAGTGCAACACAATTTGGTGTAGATGGGAAAGCAAGACCGGTCGA
TTCTCGCATTCCATTGGTCCATCACGATGAGAGAGAGGTTTCTATGGATG
ATGTGCTGAACTCCGTCAAAATTTTAGTCGACAAATTGACCGCCAAAaga
gatgaagaaaaaaaacaagaacagcAGAAGAAAGAGttcaCTTTTGAGAG
TGTCCACAAGGAAAACGATAAGGAAGAAACTTCAAACGATAACAATGTTT
ATGAAGAATATGAAGCACTCAAGAAAAAGTTTCTCGACACTTTCGATAAA
AGTCACAACGAAAAACGACAAACGCTCATCGGATCCGGTAAAGATAACCA
TGTCGAAACCGGTTCTCCACAATCGGGACTTCCAAGTAAACCCGATCACC
CGACTTTGATTGGATCGGGGAAAGACAATAAACGGGAAAAACTTCGATCT
CGTTTAAACGATTTATATGACGAATTACGAAAGGAAACGACCGAAAGACT
TGACCGGGAACGAGAATTAAACGAGAAAAAACGACTGGATTTCGTGAAGA
AGGATTTAGTGGATTTGTTGAACGGACTTCAATCAAAAGACACTTTTACT
TTTCACGATGGAAAATTCGGTTTTGATGAGAAGATGATTAACTCAGTTGA
GGAGACCACGCGTGAAAATAATATTGCTCGCGCGGCCAAAACAACCAAAC
AGGAAAGCAAACGTTCCAAGCTAGAAGTCGTTCAATCGTTAGTGAAGGAG
TTACATGAACTAGAGGagaataaaaaacgagaagtaatgaagaaaaaaga
agaagaagaaaggaCAAGATCTGTCGAACgaatggagaaaatttttatgg
gtgttttgaagaaagaaatggAGAAACGAAAAGCGGCCGCTGCACAGGAA
AAAGAAGCCGCGCGAATAGAAGAAGAGAAAAAACGGGCTGCCGTGCAAGC
TAAGTTGGAAGCTGATGCACTTAAGAAAAGAGAAAACGAATTAAATACAG
GTCGAGATATGTTGCTAAAGATTATGGGTGATCTTGAAAAACGAGTTGCT
aataaagagaagaaagaaaGCGCATCCACAGGTAAGGATGTCAAGAAAAG
CACAAGTAGCGATTCTATTGAGAAAGAATTAGATAACATcatttcttctt
tctcaaagaaaattcaaaggAAAGACATTCATGAAAGCGAAATCGATAAA
GCGTTCGAAGGATTCAACATTGatcaaaataaagtgaaaaacaGCAGACC
ATAGttcaCTTTTGAGAGTGTCCACAAGGAAAACGATAAGGAAGAAACTT
CAAACGATAACAATGTTTATGAAGAATATGAAGCACTCAAGAAAAAGTTT
CTCGACACTTTCGATAAAAGTCACAACGAAAAACGACAAACGCTCATCGG
ATCCGGTAAAGATAACCATGTCGAAACCGGTTCTCCACAATCGGGACTTC
CAAGTAAACCCGATCACCCGACTTTGATTGGATCGGGGAAAGACAATAAA
CGGGAAAAACTTCGATCTCGTTTAAACGATTTATATGACGAATTACGAAA
GGAAACGACCGAAAGACTTGACCGGGAACGAGAATTAAACGAGAAAAAAC
GACTGGATTTCGTGAAGAAGGATTTAGTGGATTTGTTGAACGGACTTCAA
TCAAAAGACACTTTTACTTTTCACGATGGAAAATTCGGTTTTGATGAGAA
GATGATTAACTCAGTTGAGGAGACCACGCGTGAAAATAATATTGCTCGCG
CGGCCAAAACAACCAAACAGGAAAGCAAACGTTCCAAGCTAGAAGTCGTT
CAATCGTTAGTGAAGGAGTTACATGAACTAGAGGagaataaaaaacgaga
agtaatgaagaaaaaagaagaagaagaaaggaCAAGATCTGTCGAACgaa
tggagaaaatttttatgggtgttttgaagaaagaaatggAGAAACGAAAA
GCGGCCGCTGCACAGGAAAAAGAAGCCGCGCGAATAGAAGAAGAGAAAAA
ACGGGCTGCCGTGCAAGCTAAGTTGGAAGCTGATGCACTTAAGAAAAGAG
AAAACGAATTAAATACAGGTCGAGATATGTTGCTAAAGATTATGGGTGAT
CTTGAAAAACGAGTTGCTaataaagagaagaaagaaaGCGCATCCACAGG
TAAGGATGTCAAGAAAAGCACAAGTAGCGATTCTATTGAGAAAGAATTAG
ATAACATcatttcttctttctcaaagaaaattcaaaggAAAGACATTCAT
GAAAGCGAAATCGATAAAGCGTTCGAAGGATTCAACATTGatcaaaataa
agtgaaaaacaGCAGACCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000330_pilon | genome | sc0000330_pilon:39109..44007 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-1611:3832 |
| Aaloc | 271-543:3222 |
| Aaloc | 73-267:635 |
| Aaloc | 40-72:239 |
| Aaloc | 1-36:1 |
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