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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:68323..73564- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_013059 ID=XLOC_013059|Name=XLOC_013059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5242bp|location=Sequence derived from alignment at sc0000168_pilon:68323..73564- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAAAATCGAAATGGTGAAGAAACACAATATCAAACTAAAGATCACCAA
CGGTACAGGAAGCAGTTTGAAATACCACGGCGAATGGTTTGATTCAGGAC
GCTTGGCTGATGGATTTCGATGGCCTGAACTCATCCAAGATGGCGGAAAA
GAAACCGTGCTCTGCTATGAAAGTACATGTTTTTTTTATAAGCATACAAA
AATCCAAAAGCTGGTTCGGAAATACTTAGATCGAGAGATTTATAAAGCTG
AAAAATGCTTTGAGGGATGCTTAGATCCTAAACAAAATTTTAGAGAAATT
TCGAAAATCCAGCCAAAAACAAAGGAATTCTGAAAAGGAAGGCTGAAAGT
AATGTTTAGCATATGCTTAAATTTTTGCCATATATGAGCCTAGATATGCT
TATAAGCGCAATGCTTATAAAAAAATCATTTATGTGTTGAATTCTCTTCC
AGGGGAGGGCACTTAGTCGAAACAGGTGACGGGTTATGTGCGAGCATGAA
CATGGTGTGAGCTAAAAAGGCACCCTTTTTCATTAACTCAAAAGTCTATC
AAAGGGGTGTAAATTCATATGTTAGTCAGAGGATCCCAAAATAATTACTT
TCTCCTCTCAAGGATCACGATTTACAAAACTTACGACCTAAATTTGATGA
AAGTCAATCAAAATTTGCAACAAATCACCCAAAATATTGGTAAAAAGAGT
CTCAAAATTGGGAAAAAAAATTCTCACAAAGGTCGAATACCCATCACCTC
GCAAACTTAGTATACCCGCTAAGGAGGAATAATCATATATTGAATCAAGC
TGATTAACTCTGCTAAATCTGTACTCGCATCGACACTAAGAGTTTATAGT
GACGAATTTTAAAGTCAAAACTCGGTCGATCTTACCAAGTATCGCTATCA
GCCTTCTATACAGTCCAGTGGCTAAAAGAAAAACTCTCAATCATAAATTT
AAAACCCCCTAAGACATGCAATGAAGTCTCCTCGAAAAACTTTTAAAATA
AAATTATGTATTTTAGGGGATTGGGCAATGGCTGGATGTTCAGGGTACGT
TCAATATCGAATCAACGGTCAAGTTTTAACGATCGGCTTTTCAAATCCTT
CTGCTGGAAAGAATAAAGTTGGAGTCGGATTGACTGGTAAAAAGGTATGA
TTTCTAACACTTACCAAAGTCAAACCCAGTCCCGTAAAAGAAATGCTGGA
AGGGGCTCTGGGTACGAGTTTTGGTAAGATTAACCGTGCAAAAAGAATGC
ACCAACTTATGGGGCGTCGAAAGCTCCGTACGGATAGATCAATAATTTTC
AGACACTCACCCTTGCTACCTTCATCCTGCCGAGTAAAAAAACAATAAAT
TTGGTTTAGTCTTTTCTTAACCCTACCTGGATGTTTATGTGCTTATCTGA
TAAAGGAAATTCGATGTTTGTTGTACTTAAAAAAATACTTTCCTAAAAGT
TTAGAGCTTGGATATGCAGGTTTCTATTAACAATGCGCATTCATAGAACT
TTGGATAAACCCCTTTTACTCGAAATAATCACCATAAATGAATACCTTTT
GCATAAAGATATGGGATGAGATGGGATGCAACGATTATTCACCACACGTC
ACGACTTTACAGATGGAAACGTTCGTATTAAAATGCCATTATTCATGTAC
TGGAGGTGCTACCAACAACATTGACATTGTACTGGAAAATATAGAAAACA
GGTTTGTGATGTATTACACTATCATCGGTAAAAAAGATTCGATGAACGCC
GAAACGAGTAATTCATTATATCCACATTTGCAATTTCCTTTAGTAATAAC
GTAGACCCAAGGTGGGGGGATTGGGCAAAAAGGGGTACGGGGATGTACCG
CTGGTCAATGTACCTTTTTTCACCTCTATGAGTCCCAGGTAGGGTCGCAA
AAACACCGAAATAGAAAAACCAGTCCCTCGTAGATTACCTTTTGGGGAGA
ATTTGGAAAAATATGGAAATTTTTGAGAAAATCTTGGAATTTCAGTCCTA
TTCAGGGTCACTTTAAAAAAAAAAAGAGTCACCGTAGGGTCCATTTTTCG
AACTTCAGCGGCACACCCCTGTCGGTCAGCAAGGGTAGTTTCCCCTCAAG
ATGTAGACCTTACAGCTGATTGGTTGTAAGTAATTTAAAATCAGTCAGTA
GTTCACTAGCAACCAATCAGCTGGTTTTTTCCGTAATGTAATGTTAGAGG
ACATAGCAATGGTGCATATCTTGAATAAACGTTACAGCGTAGAAATAAAG
TCGTCTAGTAGAGGCTAGGTTTAACAGGGATTTGACACGTTGAAATTATT
TTTGTTAATTTCTTTTTATTATCAAAGACTCAACTTTAAAAGTCGTCTTA
TTACAGTGTGAACCACTACATAGAAATGGCAACTATTACCTTAACGTGAA
ATATTTCCCGAACGGGAAGGTGAAAATAACCCAAAAAGGAAACTGTTTCC
AGATTGAAAATTTCATCACTTTTCTGTTTCCCGTCTTGGTCAATAACTGT
TCATTGTTCCCGATCGGGAAGTTGAATTTTTGTAAAGAAAGCAGATTTTT
GTTTCCCGATCGAGAAGAAGTTTCCAAATAGGGAAGTTTTTAATTGGGAA
TGGGGAAAGTAGAATTAAGAAGCGATTACCCGGTGGATTTCTTAAGTACC
CGGTGAAGGGTATTTATTTACCTTCTTTTACAATAGGCATCAGTTATTTA
CCTTCCACGACCATTTCCGGAGTGCGCAGAGGTCACATTCCCGATCGGGA
AACTGGTTAACTTCCTGATTCGGAAACTCTATCCATTTCTAGAAGAATGA
CATTCTTCTATGGAATTATTAACAATTTAGCCCCTTCGTATTTACGTAAC
TACCTGCCAGTAAGACTTACAGCACCAGGTGGCCTTAGAACAAGAAATCC
TATTTATCCTCCTAATATACGAACTGAACGTTTCCGTAACACTTTTTTTC
CGTACTGCATATCTCAGTGGAATGTTCTAAGAGGTAATATACGAGATCTA
CCTTCAATTAAAACTTTCAAAAAAGCAATCTATGAATTTTTGAGACCCAA
GCAATCCCATGTTTTTGATGTTCCTGACATTCAAGGAGTGATCTTTCTTA
ATCGACTTCGGGTCGGTTTCAGCCATCTCAACGAGCATAAATTTAGACAT
GGCTTCCGCGACACTTTAGACCCTTTCTGTGGTTGCCGAACTAACTCTGT
TGAAAACACTCAACACTTTCTTCTGCACTGCTCTATATATTCCCATGCAA
GACAATCTTTGTTCGACAAACTTCAGACCCTAGGCATTATTTTTCATCCG
CCACTTAACCCTCCTTTTTTCTGTCGGCTTTTATTATATGGGGATGAAAG
TTTGACTTCAAATCTAAATAAATCTATTCTTTGTTCTGTTGTTGAATTTC
TTAACGAAACTGGAAGGTTTAGCGGTGCTTTATTTTAGGCTTTTACCTAA
CAACTGTAGCTTCCTTCTCCAAGATTTTTTCTTTTTATTTTCTTTATTTA
CTTATTTATTTATTTTTTACATAGTCTAAAGTCTGTTCACGATAAGTGTG
CACTCTTTTTTCTTTTACCTATAACTTTGGAAGGAATTCTTTGTTCTTTA
TAAATTTGGTATCGTTGGGAGAGATATTTGTAAGTGGAACAATTTGAAGT
AAAAAAGTCTTTAAAAAAATTCTAAAGACGAAGATGAAAATGAAGAAGAA
AAAAATGAAGATCTTGTAGAGAAGTGCTATAACTTTCATTTTCACTGGAG
AGATTTTTTGATCTTAGGAGGTATCACCACTGTGAAGAAATGTCACTAAA
ATATTTATTCAATATAAAGTTATGATACAAAGTTAATAAGTGATTGACCC
CAAAAAACAGCAGAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATTAG
CTTATAACTTTGTTTGATATCTTTTGACTGAATGATTAGTTTTGAGAAAT
TTTTTCACAGTGATAACGTTCGATAATTAAGGAGTCACTTCAGTGAAAAT
GATAGTTATAGCACCTTTCTACAAGATCTTCATTTTTTTCTTCTTCATTT
TCATCTTCATTTTTAGAATTTTTTTATAGATTTTTTTACTTCAAATTGTT
CCACTCACAAATATCTCTCCAACGATACCAAATTTGTAAAGATTGAAGAA
TTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGCACACTTATCGTGA
ATAGACTTTAGTACCTCTGGCGATATAACGTTAGTTCCTAGCGGGGGGAG
GGACTATATTTTATGTTTAAGTAATGTTTTGTAATATATGTTCGTAGTGT
ACACGTGTCTTTGTTTCAATAAGAAAAAAAAAAAAAAAAAATTTCGGGAA
GTTTTTCACCTTCCCGTTCGGGAAATATTTCCCGTTAAGGCAATAGTTGC
CATTTCTATGTAGTGGTTCCGACTGTATTAGGAGTTGAAATTTGCAATTT
TCTTTAAAAAAACTTAGCAAAAAATGACCGAGGCACTTAAAGGGTTTACC
CCAATTTATTGAATATTTAGGATAAGATAAGCATTTAGACTTGAGGAACT
TTTTTCTAAAGCCTTTGTTAGAATAGAATAGCTATTTATAAGAACAAATG
AAATTTTCGGTTTTTGCTCACTTTGGGCATGATGAGTGATGTCATCAAAA
ACAATTTTTGACAAAAAGTTACCTTGTATGACAAAGGATCATGTGTGCCA
AATTCCATTCAAAAAGACCCCCCAGATCAAAAGTTAAGGGGTAGTACAGG
AACATCCTTCCCCCTAGTTTGAGCCACCCCTATGAATAGAGTTAAAGAGA
TCTCGAGAAATCGCTAAAATTGAAAACCTACGTTTCGACCATTAGAAAAA
AGCTACTTTAAGCGATCGAAAAATTGTTGAAATTGAAAATTTTAGTAAAG
TACTTTCGGGAAATAAAGTAGAGATGTTAAAGTTTTTCATGCAGCAAAAC
TTTTTATTTTTAAAACTTTTTTTTCCCCTGGATTTGAGAGAAATTTTTGA
TTTAATTGACGTTTTGGGGGCCACAGAATATACTGTACTTAATGACTCGA
CTTTAAAAGTCGTCTTTTTAGGGGTTGAAATTTGTACACAAAAATACAAT
TTCTTTTAGAGTCAGAGACGTTCATCCACTGAAAGTTGAAGAAGAAAGAT
GGGGAAGCAGTGGCGTTCCAATACAACAAGAAAGTTATAGTGAATGTACG
GAAAGTACGATCTATGAAAGAAAGTTTATGAATGGTTATTGA Coding sequence (CDS) from alignment at sc0000168_pilon:68323..73564- >XLOC_013059 ID=XLOC_013059|Name=XLOC_013059|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000168_pilon:68323..73564- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAAAATCGAAATGGTGAAGAAACACAATATCAAACTAAAGATCACCAA
CGGTACAGGAAGCAGTTTGAAATACCACGGCGAATGGTTTGATTCAGGAC
GCTTGGCTGATGGATTTCGATGGCCTGAACTCATCCAAGATGGCGGAAAA
GAAACCGTGCTCTGCTATGAAAGTAAAAATCGAAATGGTGAAGAAACACA
ATATCAAACTAAAGATCACCAACGGTACAGGAAGCAGTTTGAAATACCAC
GGCGAATGGTTTGATTCAGGACGCTTGGCTGATGGATTTCGATGGCCTGA
ACTCATCCAAGATGGCGGAAAAGAAACCGTGCTCTGCTATGAAAGGGATT
GGGCAATGGCTGGATGTTCAGGGTACGTTCAATATCGAATCAACGGTCAA
GTTTTAACGATCGGCTTTTCAAATCCTTCTGCTGGAAAGAATAAAGTTGG
AGTCGGATTGACTGGTAAAAAGGGGATTGGGCAATGGCTGGATGTTCAGG
GTACGTTCAATATCGAATCAACGGTCAAGTTTTAACGATCGGCTTTTCAA
ATCCTTCTGCTGGAAAGAATAAAGTTGGAGTCGGATTGACTGGTAAAAAG
ATATGGGATGAGATGGGATGCAACGATTATTCACCACACGTCACGACTTT
ACAGATGGAAACGTTCGTATTAAAATGCCATTATTCATGTACTGGAGGTG
CTACCAACAACATTGACATTGTACTGGAAAATATAGAAAACAGATATGGG
ATGAGATGGGATGCAACGATTATTCACCACACGTCACGACTTTACAGATG
GAAACGTTCGTATTAAAATGCCATTATTCATGTACTGGAGGTGCTACCAA
CAACATTGACATTGTACTGGAAAATATAGAAAACAGAGTCAGAGACGTTC
ATCCACTGAAAGTTGAAGAAGAAAGATGGGGAAGCAGTGGCGTTCCAATA
CAACAAGAAAGTTATAGTGAATGTACGGAAAGTACGATCTATGAAAGAAA
GTTTATGAATGGTTATTGAAGTCAGAGACGTTCATCCACTGAAAGTTGAA
GAAGAAAGATGGGGAAGCAGTGGCGTTCCAATACAACAAGAAAGTTATAG
TGAATGTACGGAAAGTACGATCTATGAAAGAAAGTTTATGAATGGTTATT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:68323..73564 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 445-576:133 |
| Aaloc | 301-441:3685 |
| Aaloc | 175-300:4225 |
| Aaloc | 1-171:5243 |
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