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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:126714..132385+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012992 ID=XLOC_012992|Name=XLOC_012992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5672bp|location=Sequence derived from alignment at sc0000107_pilon:126714..132385+ (Clytia hemisphaerica_ch_hm2_pilon)
CGATTACAGATTCCAATAGAAGTATTTGTTATTTTACACGAGTTTCTCAT
TTGTGCGTCTTTCTATCAGAAACTTAAAATGGATTTTGCACATCGCGATG
AACGCAACTTGACACATAGTGCTACTGGTAGAAATATCACCAACAAAGCT
GACAGTGTagaaatctcaaaacttaaagaAGATTATGAGAAGCAGATTCG
AAaattgacatttgaaaatcGTATCAAAACCCTGGAGCTGGAGAAAGAAA
TGACCAAACAGGATAATGAGCAGAAGATGAAGATTTTGCAGCTTGAAAAG
GACAATCAATCGTTAATACATGAACTTGAGCTTGTCAAGTTGAAGACCGC
CCATGAGATGGAGGCTAAGGGCGGTGTGGTTGATCGCGAAATGGAGAAAG
AAATGCTGGAACAGCAGAAAGAGTTTCAGAACAAACTGGCTGAGAAAGAC
AAGGAGATTGCTGCCAAGGAAAACGAGTTCAATCTTAAAATGAAGGACTT
AGAGATTTCAAAAGACAAGGAGATTGCTGCCAAGgaaaacgaacgcaaaa
caaaaatcaatgaaatggaaaaagtaactctggcaaaaGAGCACGAGTAC
CAAACCAAACTTGCTGCCaaagaaaacgaattcaatTTGAAAGTCAAGGA
TTTGGAGAAAGAAAAGGAGTTAGAGATTCAAGCGCTGCGTCACgaaaatg
aaataatgaaatcgaaaaagaaatccacaaatgagaacgcaactgaagaa
aagaagGGACAAGTGATTACGAGAAATGCGCAACAAAATCATCTGGAACC
GAAAATGCAAAGCCTTGTCGACGGTattgttaactttttttctGGTCAGC
CTCTTCCTTCTGCTTCTTACAAAAATTGGTATGAAGATATTTCAAGGTCT
TTGGTCAATAAAAAACCAGAATTCGTTTTACATGGATCATCGAGTTGTTA
TTTCGTTAAGAAAGAGATGTGTCAAATACATAATTGTTTGTATCTCGCAA
CTAAGAGAAAGAACGAGAGTCGTGGGGAAGGTGTAAATGTTCTAGATCTT
GTTGTTCCGAATAAACAACAATTGAAGAAtgcaaaagtgtttttattACA
TCCAGTTAACCGGAAAATGTGTATTGAGCATGGTAAAATGTACACTAATG
ATAACCACGAGATGTGGGAATTTCTAAATGTTAACAATACCTACTTCGGA
GAGAAACTATCAATTATAATGTTGCTTAAGTTTGAAATGACCAAATAAAG
TTTTTGCCTTGTATGGTATAAAGCAAActgacaatttgaaattttgatga
aaatgtcGAATAAACAGAGAGTAAAACATTATGAAGTTTTAACCAGAAaa
ctttcatcaatttttgtatctttaagaatttcatattaattttttaattt
tattttattattcagatcaaaattcgtaatattttaacattGACAAAAGA
TACCGGGTGTGTTTTAAAAAACGCccctatttttcaatttttgtcgtTCA
TTTTTCTATCAAACAAAAACATACGTAATTTTTAATGaagtttgaaattc
aatttcctATCCCCTgtaaaaattatacatttatattttcattgaagATG
GCTTTATGACTATTTCGCTAACTTACTTTCAATCTTTCATTGTTCACAGA
TTTTGGTAACAAAATTTCCGTGTATGGAATGAAAAACGAAAGTACATCGC
GCTTTCATCTTCATATCTTACAacttttaaaacatcaaaatggcattatt
gttttcattttttcaagttaAGTTTTGTTCTAGAGTCATAATTTGATAGA
TTTTAGCTTGTTAAAAAGACACTTTAAATTGTCAACGATGCTTAAAAGAG
GACTGGAAAATCTTAGCATTTTCAGTTCAAGTGTTTTCCCAGAAAAGTTA
AGAAGCAGTAGAGCTTTTAGGGTATATCCCGGGTAGGTTAGAATTTGtga
tatgaaaaaataaagaaaattaaattaaacgaaaaagaggaaatttaatt
ttgcttaaaaGTGCTACACATTTTCTTGAACACCTTGAAAAGTCTTaggt
atattttttattgttatattccaagtacacgtttttttttataaggaacc
ttaactttgctctgagcttggagttccttatttttacagagaatttcagt
ctcaaagttccttatcgagttccttactacataggaaattttgaactttt
tgccccttgaaagatcaaaatttggtcaaattagtcccgataaggtacat
tattttcaaatccacttattctcagcctgagcagttccttaacaattcct
tattttttgaaccattttcagcctcgagttccttataaacgtgttcctta
taaaaaaaaaaaacgtgtccTTAACTTTATGCTTGAATTCCCTTTCTTTG
GCAGCAATATTTGGCTTGTCATATCAAGGAGCTTAGTTTGGTGCTTATGC
CCTTTGGCCAGAGTTGCTTTCTccatttcaataatttttgttttgcgtTC
ATTTTCCTTGGCAGCAATTTTCTTGTCTTTTGCAATCTccaattctttca
ttttaagaTATGACTCGTTTTCCTTAGCAGTCatctctttttctttctca
gcCAGTTTCTTGTCCTTTTTCAGCCATTATTTGTCTTTCTCAaaccagtt
tgttttgaaactcGTTTTGTTGTTTCAGCAAGTCTTTTTTCGCTCCGTTA
CCCATATCTTTGTCAGCCTCATGAGCGGTCTTGAACTTCACCAGCTCAAG
TTCATGACTCAACAATTGATTGTCTTTTTCAAGCTGCAAAATTTTCATCG
ATTCTAATGATATAACGGCATCATGACCGCATAATTAGATTAAAAGCTAA
AGTGTACGAAAATAACAAATCAAATCTGTCTTTGATGAATTTCGatcaaa
ttttttagaaataacttggtatcattgtgatgagaatttttcagactaca
agttagtgtaaaatttgttactggatactgaaagtttaaaaagtaatgga
tcaaaaacgaaaaacctAAAACCACTTTTATAAACACAGCATATACAAAC
CAGCCCTCTTCGCATGGTGAGCCGTTTCTGAGCTTTTTGTAACGACCAAA
TTAAAGCTAAAGCAAAGGAGTTTTCAATAGACATGATCAGAACACTTCGG
GTAATCAGAGAAGCACTTTTTCTATTCCATCCCAtttttttGATTATACC
TTTTTGTCAAGCAGCCATATATAACTCGTTCAACAAAATGTTTTCAGACA
CACTTATGTTGTgtcttaaaaaacattttctaaaaactaCGAAGCGCAAA
GAGAAAGAGTGACTACTCGTAGTTCTcgggattctttttctttttatcta
tTTATCTAATGAGGTGCAAGCCCATATgcaatactcttaggttccaaata
aacgccccttccctgcttgttaatttttcgaaaattttacaacccccccc
cccccggaccttattaggaccccccccccgtttattatttttttaatttt
tttcaactttcaaagacaaggtcccttattctgctctaaatagcctgatt
ttagcctatatttatcttatttttgggATTTCGTAATTACAATTTCCATC
CCCCCTGCAGTTAggccccctgtttatttggaacctaagagtaattatAT
AATCTATAACCGAGGTCACTTTAAAAGTTTGATCGGAACCTTATTTTGTC
TTCTCATTATTATTTGAGTACAAATATATCAATTTAGAGCTGTAGAAGCG
GgtcaaaatcattttgaatACTAAAAGGACACAAATCGTGTTTCTAAGTT
TTCCTCCTCATACTATACTTCTTTACAGCTACCTGTTTGAAATAAACGCC
CTTTTGCTCGAAGGGGTTTTTGATCGTAATACGGTACACAAATTCTAAAG
GTTGAAGCAAAAATAGTCATTTTGCCACCGGACTATTTATGTAAGAACTT
CAGACTGAAATtcgggaaaataagaacattagtAAGAAGAAGACCACCCT
tatttgaactttttaaaataGTTTCCTTTCTATTAATTCTCTTAAATCTA
TCTGGCAGTAACCTTTTTACTTCCCAACTTTAAATTAGAGCAGAAAAGTT
GACTTGTGCACCAATTTTTATACATTTAAatgaattaatttcaaaaaacc
cCATTGAAGgttcaaatttatcaaaatatccaGGCTAAGCCCAAATCACG
acgttttaataaaaaaaccaTAGAAGAGTAGACTAGAAGAGTAATTGGAt
actttttgttgatttttgcttttgattGATACACGAAAAGTCATTTCATG
CAACTTCATATTTACACCATTTAAACAAACATACTTTGAGCGAATTTGAT
ACGaaagcaaaacaaattttcGAGGTTGAAGTAAATACACATTCTAAAAG
AAGTACTTTTTTCTACTGTTAATCTTATTAGAGTATCTCATTTGTGCGtc
tttttatcaaaaacttaaaatggatTCTGCACATCGCGATGAACGCAACT
TGGCACACAGTGCTGCTGGTAGAAATGTCACCAACAAAGCTGACAGTGTA
GAAATTGCAAAACTCAAAGAAGATTATGAAAAACAGattcaaaaattgac
atttgaaaatcGTATCAAAACCCTGGAGCTGGAGAATGAAATGACCAAAC
AGGACAAAGAGCAGAAGATGAAGATTTTGCAGCTTGAAAAGGACAATCAA
TCGTTAACACATGAACTGGAGCTGGTCAAGTTGAAGACCGCCCATGAGAT
GGAGGCTAAGGGCGGTGTGGTTGATCGCGAAATGGAGAAAGAAATGCTGA
AACAGCAGAAAGAGTTTCAGAATAAACTGGCTGAGAAAGACAAAAAGATG
GCTGCCAGGGAAaacgaatttcaaaacaaactggccGATAAAGACAAGGA
GCTGGTCGCAAAAGACAAGGAGATTGCTGCCAAGGAAAACGAGTGCAAAa
cgaaaatcaatgaaaagGAGAAAGCAACTCTGGCAAAAGAGCACGAGTAC
CAAACAAAGGTTGCTGAAATGAGGAACCAAATTGCTGCTAAAGAAAATGA
GTTCAAACTTAAAGTCAAGGATTTGGAGAAAGAAAAGGAGTTAGAGATTC
AAGCGCTGCGTCACgaaaatgaaataatgaaatcgaaaaagaaatccaca
aatgagaacgcaactgaagaaaagaagGGACAAGCGATTACGAGAAATGC
GCAACAAAATCATCTGGAACCGAAAATGCAAAGCCTTGTCGACGGTattg
ttaactttttttctGGTCAGCCTCATCCTTTTACTTCTTACAAAAATTGG
TTTGAAGATATTGCAAGGTCTCTGGTCAACAAAAGACCAGAACTCGTTTT
ACATGGATCATCGAGTTATTATTTCGTTAAGAAAGAGATGTCTCGAATGC
ATAATCTTTTGTTTCTCGCAACTAAGAGAAAGAACGAGAGTCGTGGGGAA
GATGCACATATTCTAGATCTTGTTGTTCCGAATAAACAACAATTGAAGAA
tgcaaaagtgtttttattACATCCAGCTGATCGGGGAATGTGTATTGAGC
ATGGTAAAATGTACACTCGTGATAATTACGAGGTGTGGGAATTTAAAAAC
GTTACCAATGCCTACTACTTCGGAGAGAAACGATCAATCATAATGTTACT
TAAGTTTGAAATGACCAAATAA Coding sequence (CDS) from alignment at sc0000107_pilon:126714..132385+ >XLOC_012992 ID=XLOC_012992|Name=XLOC_012992|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2562bp|location=Sequence derived from alignment at sc0000107_pilon:126714..132385+ (Clytia hemisphaerica_ch_hm2_pilon)
CGATTACAGATTCCAATAGAAGTATTTGTTATTTTACACGAGTTTCTCAT
TTGTGCGTCTTTCTATCAGAAACTTAAAATGGATTTTGCACATCGCGATG
AACGCAACTTGACACATAGTGCTACTGCGATTACAGATTCCAATAGAAGT
ATTTGTTATTTTACACGAGTTTCTCATTTGTGCGTCTTTCTATCAGAAAC
TTAAAATGGATTTTGCACATCGCGATGAACGCAACTTGACACATAGTGCT
ACTGGTAGAAATGTCACCAACAAAGCTGACAGTGTAGAAATTGCAAAACT
CAAAGAAGATTATGAAAAACAGattcaaaaattgacatttgaaaatcGTA
TCAAAACCCTGGAGCTGGAGAATGAAATGACCAAACAGGACAAAGAGCAG
AAGATGAAGATTTTGCAGCTTGAAAAGGACAATCAATCGTTAACACATGA
ACTGGAGCTGGTCAAGTTGAAGACCGCCCATGAGATGGAGGCTAAGGGCG
GTGTGGTTGATCGCGAAATGGAGAAAGAAATGCTGAAACAGCAGAAAGAG
TTTCAGAATAAACTGGCTGAGAAAGACAAAAAGATGGCTGCCAGGGAAaa
cgaatttcaaaacaaactggccGATAAAGACAAGGAGCTGGTCGCAAAAG
ACAAGGAGATTGCTGCCAAGGAAAACGAGTGCAAAacgaaaatcaatgaa
aagGAGAAAGCAACTCTGGCAAAAGAGCACGAGTACCAAACAAAGGTTGC
TGAAATGAGGAACCAAATTGCTGCTAAAGAAAATGAGTTCAAACTTAAAG
TCAAGGATTTGGAGAAAGAAAAGGAGTTAGAGATTCAAGCGCTGCGTCAC
gaaaatgaaataatgaaatcgaaaaagaaatccacaaatgagaacgcaac
tgaagaaaagaagGGACAAGCGATTACGAGAAATGCGCAACAAAATCATC
TGGAACCGAAAATGCAAAGCCTTGTCGACGGTattgttaactttttttct
GGTCAGCCTCATCCTTTTACTTCTTACAAAAATTGGTTTGAAGATATTGC
AAGGTCTCTGGTCAACAAAAGACCAGAACTCGTTTTACATGGATCATCGA
GTTATTATTTCGTTAAGAAAGAGATGTCTCGAATGCATAATCTTTTGTTT
CTCGCAACTAAGAGAAAGAACGAGAGTCGTGGGGAAGATGCACATATTCT
AGATCTTGTTGTTCCGAATAAACAACAATTGAAGAAtgcaaaagtgtttt
tattACATCCAGCTGATCGGGGAATGTGTATTGAGCATGGTAAAATGTAC
ACTCGTGATAATTACGAGGTGTGGGAATTTAAAAACGTTACCAATGCCTA
CTACTTCGGAGAGAAACGATCAATCATAATGTTACTTAAGTTTGAAATGA
CCAAATAAGTAGAAATGTCACCAACAAAGCTGACAGTGTAGAAATTGCAA
AACTCAAAGAAGATTATGAAAAACAGattcaaaaattgacatttgaaaat
cGTATCAAAACCCTGGAGCTGGAGAATGAAATGACCAAACAGGACAAAGA
GCAGAAGATGAAGATTTTGCAGCTTGAAAAGGACAATCAATCGTTAACAC
ATGAACTGGAGCTGGTCAAGTTGAAGACCGCCCATGAGATGGAGGCTAAG
GGCGGTGTGGTTGATCGCGAAATGGAGAAAGAAATGCTGAAACAGCAGAA
AGAGTTTCAGAATAAACTGGCTGAGAAAGACAAAAAGATGGCTGCCAGGG
AAaacgaatttcaaaacaaactggccGATAAAGACAAGGAGCTGGTCGCA
AAAGACAAGGAGATTGCTGCCAAGGAAAACGAGTGCAAAacgaaaatcaa
tgaaaagGAGAAAGCAACTCTGGCAAAAGAGCACGAGTACCAAACAAAGG
TTGCTGAAATGAGGAACCAAATTGCTGCTAAAGAAAATGAGTTCAAACTT
AAAGTCAAGGATTTGGAGAAAGAAAAGGAGTTAGAGATTCAAGCGCTGCG
TCACgaaaatgaaataatgaaatcgaaaaagaaatccacaaatgagaacg
caactgaagaaaagaagGGACAAGCGATTACGAGAAATGCGCAACAAAAT
CATCTGGAACCGAAAATGCAAAGCCTTGTCGACGGTattgttaacttttt
ttctGGTCAGCCTCATCCTTTTACTTCTTACAAAAATTGGTTTGAAGATA
TTGCAAGGTCTCTGGTCAACAAAAGACCAGAACTCGTTTTACATGGATCA
TCGAGTTATTATTTCGTTAAGAAAGAGATGTCTCGAATGCATAATCTTTT
GTTTCTCGCAACTAAGAGAAAGAACGAGAGTCGTGGGGAAGATGCACATA
TTCTAGATCTTGTTGTTCCGAATAAACAACAATTGAAGAAtgcaaaagtg
tttttattACATCCAGCTGATCGGGGAATGTGTATTGAGCATGGTAAAAT
GTACACTCGTGATAATTACGAGGTGTGGGAATTTAAAAACGTTACCAATG
CCTACTACTTCGGAGAGAAACGATCAATCATAATGTTACTTAAGTTTGAA
ATGACCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:126714..132385 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 130-1281:4521 |
| Aaloc | 1-126:1 |
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