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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000448_pilon:150682..156364- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012989 ID=XLOC_012989|Name=XLOC_012989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5683bp|location=Sequence derived from alignment at sc0000448_pilon:150682..156364- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACATTACAGGTAACATGATGGCAAGTATGGCACAAACCAAAAT
CTACCTTCCTCGTGTTTCAGGAAATGACACTATTAACGTTAAGACGATCC
TGTTAACTGAACCTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAG
CTGATCCAAGCTTCCTATGGCGCTGGAAAATCAATCACTTTACACGAAAT
TGCAAGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTA
CTTTCGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAAC
GAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTC
TTTATCGCTTTCTGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTT
ATAACTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTC
TTAAAAACCAAATACAAACATCGAACATTACATTTCCTCTTTGATGAAGT
TCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAGCCATT
TGGAGAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAAGTGTA
CAGAAATCTCGAAAGATAACCGAGGAAGGCAAGGTCACCAATTCACAAGA
GATAGATTTAAAAAGCTCAAGCATGGAACTTTTCAAACTACCAACGACAA
TGCGAATGAGCATTTCCTTAAATAAATTGAAAGAAGTTTTGGAAGGTGAA
ATCGAAAGTTCGCCTTGCTCCTTAAACTTAGAAGTTCGATCAAAAGGTAT
AATTTACCATTTAAGTAACATTCTTTTATAAATATTCTTTTTGATCATGT
TCAATTTCCGTGGGAATTCAAAATTCAAATTTTACACCCTTTCAGTGCAC
TTTTTCCCACTTGCTCACAAATCAACCCTTACAGTGCACTTTCCAAAGTC
CAAAAAACCTACCCTTAAGGGCTACACGTCTGGTAGGTCACTTACCTGGA
GTGCCCCCCCCCGGGTTCAATTGCAACAGTGTGCAAGTAAAATATGCTCA
TTTTTATTTATTACCGAAACATCTTTGACATTTTAATTTTAATCTTTCAG
GAAACACTTTGCTGACAAAAGACGAATCTAGCAAGGTCATAATCCAGGAA
ACACAATCAAATGGAGATGGTGAAAATAGACCAGACGACTCTCAATCGAC
AACAGAAGTCGAATGTCAGGTTACCGAGATATTTTTGTTAACGATTGCAC
TGTTTACAATTAGCTTACCATTGAAATTGAATAATGAAGCTATTATCTCT
TTGTCAGAACCGTTTTTTTAAGAAATTCTTCAGACAGATTTTTTTTGATT
TTCTTTTCTCAGATTAGGACACTTTTCGTGTTGGATATTACAGCGTATTT
TTTAAAGTCCATTCAAATTATCTTCACCGGATATAATTTGCTTCTCTATA
AGTTGTGAAAAAAAACGTGCTCTCCTTGGCAACACACCCTCCTCATAGAC
CCGATAGCAGGATCTTTCAGGCAGTTGGGGTTAAAATAAAGGACTAAAAC
TCAATTGGGAAGATTGGTTGATATCCCATGTTTAGAGAGAAGAGAAGAGA
AGCTGACCCTCCGATATCATCGGACCGGGCCCTATTCCGGGATAGTTTCC
TACCCCTAGATAGGGAAATCACAGCGCTTACCAGACATTGTACTCTGTGC
TCGCGACACATCAGAGCCATTCTGTATCGATGATGATACTCGAACGGCAC
GGGATAACCTTGCGTTCTCGCAGGTACTGAACATATGAGTACCATCACCA
CACCACATTCAATGTCCAGCATATCTCCCCATACTCTTGTATCAGAGCAA
TGGTACCCTATTCCCCTTACATGGTATGGGTTTACCCGGGCCAAGGTACA
TTCACTTGCCAAGTGGATCGCAGCACCGAGTGGGAATCGAACCCTGACGG
AAGTCAAGAACGATGACCACTACACTACTGCGCATGTTTTCGAGAAAATT
CAGTGGGGATGGAAAAAATAGCCCAATAATATTTTGCAATGACGATTTGC
TTATCTGATTATTTTATGGGTGACAAAATCATAATTTTCCACTGAGGACG
ATGTTTCATCAATTTATCCAATAAGAAGGGGCCCTACCGGGTCTGTGAGA
AGGGGGTGATTGCCATTGATTCCGAAATCCCGAATTGACTAATTCCGAAA
CTCTTTGATGGGAAGAGAAGGCACTTATTTCAACTGCAGAAAGAAAAACA
AGCACGAATTTTTAAAATTGTTTTTATTATTAGATTAGTTCCATTTATAC
TGAGACGGAAAAATCGTCTGAGACGAGTAGTTTGTAAAATGTGAAATGCG
GAGGAGATCCTATTTATTGAAACATGAATGGAAAACACTCCTCCATAATG
CTCATTTTCTAAATTTGTCATATCAGATAAATTAATCGTCTCACAATCAT
GGACAAAAGGTCGTAGACAAATGAAATTTCAGTGAAATATGATTAGAAAT
ATAGTAGGGGGAAATTTGTTCGTTTTTTTTTTTAGGTCGCTCGATTCTTT
TAGTCAAAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGAGAAT
CAAATGAGAGATAGTAATCCTTAAAAACAGTGTTTTTTAGTGTTTTTCAG
CCAGAAACAGCTGTTTTGTCCAGTTTTTGCGCTTTCGGAAGCTAAATATC
TCGAGTTAGGTACTGAAACCACATATACTCGCAATATATCACTAATCTTA
ATTTCTTAAAATATACAACAGGTTTCCGTTTTCTCAAGCTAAAATTTTCA
TTAATTTTTCACCCTATGGTTTTTGCCTGAGACCGTCGTATTTGTCCGAA
AATCACACCAAAGTGTCCGAAAAAAAATTGGCACCCAAGTTATTTTGATT
CCCCTACCCCTTAGCTTTCCAAAAATTTATAACAAGTGCTTTGACTAAAA
AAATCGAGCGATTTTACAAATTTCCCCCTACAAATAGAGTAAAATGACTC
TTCAATGTGTCTGAAAAAGGAGGGAAGTTAAGAAAAACACTTTTGAAGTC
GTTGCATTGCTTTTGAATTGCTTTTGAAGGAACCACCAGCAAAAAAGCGA
AAAGAAGATCAAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCGA
CCCCGAAAACGTTTTTAAGTCGCAGCCACAGACGAGTGGAAATGAAGAAG
TCGTGAAAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGTGGG
CATTCTTTCATGAGCTCCTTAAAACCACGAATCTTTCATTTCACCAAAGC
TTTCACACCTTTATTTGCTTCGTTCCTTCCGATGCTAGCTGCCATCCTCC
AGTTCTGTTTGAATGAGAGAAAAGAGGACGAAGTCGTGGTATTATGCGAA
GATATCTGTCAAGTACAAATGGTTCAGTATGCCCTGGAAAGGATACACAA
GCGTCCAATCACATACGCACCTTACCTTACCGGAGAATATCCTCAAGACA
TCCACAAGATGAAGGAAAAATTCATCAAAAATTTGGACGAGATGGAGACA
GTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCCCATAC
AATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCATCG
AAGCAATCACACGAACCATAACAAATCTTGATGTCATTTCAACAAAACCT
TTTCCACAAAATCCTTCCACGAGTATCGAAAGAGCTTTTCAAAAATATGT
CGATGGGACTTTAGCTATTAAGACACACGTTGAATCAAGCAAAGACGCAG
AAGATCTTCTGAAAGTACGATTCCAATACAACAAAAAGGACGGCTCACAA
CAAACAAAAATTGTTTCACAGAAATTGACCGATTTCAGTTTCGACGTTTC
ACAATCTCTAGATGATTTTAACAAAAATGAAGAGCTATGGCAAAACTATT
TCAGGTATAATTTTTCTGTTGAAATTTTTAATGATCTTTATTATTACAAA
AAGCTCAATGAGAGGATAAGTCATATTTTCCAAAATTAGGTGCCCGCTAA
TCCTTTAGCCAAATATACTCCAGACTAAAAAAAGTACATATTTTTTTCCT
TTAGGATGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACGTAA
GTCAATACAGCTGATGTCCTCTGATTCGGCATTATGTTATTCGATAAGCT
CCCATTGTCAATCAACTAACAGTCATTTTTGACAAATTTCCTTTAAATTT
CTCATAAAAGATACCTTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGA
AATTTTGGCTAAATGACGAATATTTTTCCCCGACGAAAATTTTCCCTGGC
CTTAATGCGTTTACCAACTACCAGCAAGTGACGAATATTTTTCCCCGACA
AAAAGTTTCCCCGACGAAGTTTTCCCCGATAAGGTACTTTTTTATCGGAC
ATTTTATCGCTATCATCTCCCTGGGGTTGGTTTAATTTGAGATTCACGAT
TTAATCATTCATCGTAATGGACGATTCGCGATTCATGTTCCATGCATAAA
TTATGTTGATCATGCGAAATCATGCTAATCATGACAAAATGTTTTAGGCA
ATTTATAAAGTTTTATTCGCAGAAACCAACGACAAACTCAATTATTTTAA
AAACATAATTTATGTAAGATTATACAAATTATATTCAGCGAAGCTTTCAT
TGTATTCTCCCGACTGTACCGTGATCCTTAAGGCCGCTACCCACTCAGCA
TTTTATGGTCTGCGAACAAGGCGCACAGCTCGGGTTGAAAAGTTTCAACT
CTTGTTGCGCTCAAAGCGACAGCCTTTGAAGGCTTGATTTATGTAATTTA
TGCAATATTTAAGCTGCGCGTCTTGTTCGCAGACCATAAAATGCTGAGTG
GATAGCGACCTTTAAAAAGAAAGTAAAGCACGTGCAGACACTTTCTGCGC
TCTCTTTGTTCATATCTATTCTTCACTTCGTACATTACGATCCGCAAACC
ATGGTGCTGAGAATATTGTTCGTCAGTATTTGTGTAGTCTAAGTTTGTAG
TTTTATTACTTACTGATTAGTTTTTTGCGTAAATTTACCGTCGTAAACAA
AAGCGAGAAAAGATTATGCCATTGTTTTGGAAATATGCAAAATATGTTAC
ATAATTTAAGTTTTATGTAAAATATTAAGGAATAATTAGCATACTTTATG
CATGGGTCGCGAATCGTGCATCGTAAATTGTTAGACCGTCCATCTTAAAT
TGCACCAAACCGTCTCTCTGGGAGAGTTTTGATTTCTAGCATATAAAAGG
GTTTTTGGAATATAGTATGAACTTTAGACGATCCTATCCTCAACACAATG
TCACAACAAAAGGAATAATTCGGGAAACGAGATAAATTTGAAAACATAGT
TTAGTTCGGAGGGTTCGACATTCGTGAAAGATTCCCTATGAAGACTGAAT
GTTCTATTTCCTCGATTTTGCAATACTATATAAACTTCAAGTGTAGTAAA
AAATTACCCTCATTAGCAATGTAATATTCCAATCTCCATAATTTTTGTTT
TTGCTGTTCTGAAAGGTAAAGCTTCTATGGATGATATATATTAACAATTT
CTCCTGCATATAGCATTAGCAACAAATGGGATGGCAAAACCATGGAAAGT
GTGACCTTGAATGATGGAACTACGCTCCGTTTT Coding sequence (CDS) from alignment at sc0000448_pilon:150682..156364- >XLOC_012989 ID=XLOC_012989|Name=XLOC_012989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3792bp|location=Sequence derived from alignment at sc0000448_pilon:150682..156364- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACATTACAGGTAACATGATGGCAAGTATGGCACAAACCAAAAT
CTACCTTCCTCGTGTTTCAGGAAATGACACTATTAACGTTAAGACGATCC
TGTTAACTGAACCTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAG
CTGATCCAAGCTTCCTATGGCGCTGGAAAATCAATCACTTTACACGAAAT
TGCAAGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTA
CTTTCGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAAC
GAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTC
TTTATCGCTTTCTGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTT
ATAACTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTC
TTAAAAACCAAATACAAACATCGAACATTACATTTCCTCTTTGATGAAGT
TCCGCAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAGCCATT
TGGAGAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAAGTGTA
CAGAAATCTCGAAAGATAACCGAGGAAGGCAAGGTCACCAATTCACAAGA
GATAGATTTAAAAAGCTCAAGCATGGAACTTTTCAAACTACCAACGACAA
TGCGAATGAGCATTTCCTTAAATAAATTGAAAGAAGTTTTGGAAGGTGAA
ATCGAAAGTTCGCCTTGCTCCTTAAACTTAGAAGTTCGATCAAAAGATGG
AAAACATTACAGGTAACATGATGGCAAGTATGGCACAAACCAAAATCTAC
CTTCCTCGTGTTTCAGGAAATGACACTATTAACGTTAAGACGATCCTGTT
AACTGAACCTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGA
TCCAAGCTTCCTATGGCGCTGGAAAATCAATCACTTTACACGAAATTGCA
AGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTT
CGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGC
TTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTCTTTA
TCGCTTTCTGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTTATAA
CTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAA
AAACCAAATACAAACATCGAACATTACATTTCCTCTTTGATGAAGTTCCG
CAAGAGCTGTTCACAAAGACCTACTCGGAAACACTACGTAGCCATTTGGA
GAGTGAATTTCGAGAATCAGTGGTCGTGATTGCCCTCCAAAGTGTACAGA
AATCTCGAAAGATAACCGAGGAAGGCAAGGTCACCAATTCACAAGAGATA
GATTTAAAAAGCTCAAGCATGGAACTTTTCAAACTACCAACGACAATGCG
AATGAGCATTTCCTTAAATAAATTGAAAGAAGTTTTGGAAGGTGAAATCG
AAAGTTCGCCTTGCTCCTTAAACTTAGAAGTTCGATCAAAAGGAAACACT
TTGCTGACAAAAGACGAATCTAGCAAGGTCATAATCCAGGAAACACAATC
AAATGGAGATGGTGAAAATAGACCAGACGACTCTCAATCGACAACAGAAG
TCGAATGTCAGGAAACACTTTGCTGACAAAAGACGAATCTAGCAAGGTCA
TAATCCAGGAAACACAATCAAATGGAGATGGTGAAAATAGACCAGACGAC
TCTCAATCGACAACAGAAGTCGAATGTCAGGAACCACCAGCAAAAAAGCG
AAAAGAAGATCAAGAAGCAAGCGAATCATTTGACCCAACGAAGCTACGCG
ACCCCGAAAACGTTTTTAAGTCGCAGCCACAGACGAGTGGAAATGAAGAA
GTCGTGAAAGAACTGTCCACTACATATACCTATATGAAAGGGAAATGTGG
GCATTCTTTCATGAGCTCCTTAAAACCACGAATCTTTCATTTCACCAAAG
CTTTCACACCTTTATTTGCTTCGTTCCTTCCGATGCTAGCTGCCATCCTC
CAGTTCTGTTTGAATGAGAGAAAAGAGGACGAAGTCGTGGTATTATGCGA
AGATATCTGTCAAGTACAAATGGTTCAGTATGCCCTGGAAAGGATACACA
AGCGTCCAATCACATACGCACCTTACCTTACCGGAGAATATCCTCAAGAC
ATCCACAAGATGAAGGAAAAATTCATCAAAAATTTGGACGAGATGGAGAC
AGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGGAAATGGCCCATA
CAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCACATTTTCTCATC
GAAGCAATCACACGAACCATAACAAATCTTGATGTCATTTCAACAAAACC
TTTTCCACAAAATCCTTCCACGAGTATCGAAAGAGCTTTTCAAAAATATG
TCGATGGGACTTTAGCTATTAAGACACACGTTGAATCAAGCAAAGACGCA
GAAGATCTTCTGAAAGTACGATTCCAATACAACAAAAAGGACGGCTCACA
ACAAACAAAAATTGTTTCACAGAAATTGACCGATTTCAGTTTCGACGTTT
CACAATCTCTAGATGATTTTAACAAAAATGAAGAGCTATGGCAAAACTAT
TTCAGGAACCACCAGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCGAA
TCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCA
GCCACAGACGAGTGGAAATGAAGAAGTCGTGAAAGAACTGTCCACTACAT
ATACCTATATGAAAGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAAAA
CCACGAATCTTTCATTTCACCAAAGCTTTCACACCTTTATTTGCTTCGTT
CCTTCCGATGCTAGCTGCCATCCTCCAGTTCTGTTTGAATGAGAGAAAAG
AGGACGAAGTCGTGGTATTATGCGAAGATATCTGTCAAGTACAAATGGTT
CAGTATGCCCTGGAAAGGATACACAAGCGTCCAATCACATACGCACCTTA
CCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAAGGAAAAATTCA
TCAAAAATTTGGACGAGATGGAGACAGTTCTGATATCCGATTATCGGTCT
GTTCGTGGATTGGAAATGGCCCATACAATCATCTTTGTGGATCCAGAAAA
CGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAACCATAACAA
ATCTTGATGTCATTTCAACAAAACCTTTTCCACAAAATCCTTCCACGAGT
ATCGAAAGAGCTTTTCAAAAATATGTCGATGGGACTTTAGCTATTAAGAC
ACACGTTGAATCAAGCAAAGACGCAGAAGATCTTCTGAAAGTACGATTCC
AATACAACAAAAAGGACGGCTCACAACAAACAAAAATTGTTTCACAGAAA
TTGACCGATTTCAGTTTCGACGTTTCACAATCTCTAGATGATTTTAACAA
AAATGAAGAGCTATGGCAAAACTATTTCAGGATGGCGTTTACTCTTTCAA
CTTCCATTTCATCTTTGGGAACGATGGCGTTTACTCTTTCAACTTCCATT
TCATCTTTGGGAACCAACAAATGGGATGGCAAAACCATGGAAAGTGTGAC
CTTGAATGATGGAACTACGCTCCGTTTTCAACAAATGGGATGGCAAAACC
ATGGAAAGTGTGACCTTGAATGATGGAACTACGCTCCGTTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000448_pilon | genome | sc0000448_pilon:150682..156364 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1834-1896:64 |
| Aaloc | 1792-1830:1579 |
| Aaloc | 916-1788:2605 |
| Aaloc | 799-915:4582 |
| Aaloc | 1-795:5684 |
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