XLOC_012939 (mRNA) -

Overview
NameXLOC_012939
Unique NameXLOC_012939
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000315_pilon:83724..84685+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012939 ID=XLOC_012939|Name=XLOC_012939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=962bp|location=Sequence derived from alignment at sc0000315_pilon:83724..84685+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTTCTGACTCAAATTTGAATTCACTCGAAACCAAAGTGAACTCTGATCT AGTTAAACTTTCTTCTTGGCTTCGTGCGAATAAAATTTCTCTTAACACTG CGAAAACAGAGGTCATTTTGTTCAGAAGCAAACATAAATCTGTACCTTAC TCTATGAATCTTTACCTTGAAGGACACACCTTAAAATTCACAAAGCAtgt caaatacacgtttttttttttattagaacacctaaaatttggctgagcct ggatgtgcttatttttttagcaattttcagcctagaatgttcttaaatgc gttctttatttttcaaactactctaaatcgacaacatgatacaaaataaa gagcacttaaatttggcaaaatttggacaatatttgactctcgacttttg aagatccacccctaaattcggttaaaactgcttaaaaagaggaaaaaatt gtattttcttgtcatttttttccaaactgaggctgggcatgttcttaaga tgttcttaatttttcgacgaatttcagcctatatgttcttataaactagg ttctaataaaaaaaaaaacgtgtatcttggTCTCATTCTAGATGAATTTC TAGCCTGGAATTTTCACTTTGATCATTTATCCACAAAGCTTAGAAGATCT AATGGTATTTTGTCCAAACTACGCCACTTTGTTCCACAACTAGTTCTCAA AACTTTATACTATGCTATGTTCCACTCTCATATGTCTTACGCAACAATTA TCTGGGGACAAGGCCTTACTCAAAACTCTCGAAtaggaaaattacaaaaa agatgtttgcgtattctaactttttcagattttaatgctGAGACTTCCcc tctttttcaaaaccttaaaatcccAACTTTACCAAATACTGTTatcaaat tcaatattcaacttGTACATCAAACTCTATCTAATCTTTCTCCTGAAGCC GTTACAAACGTG

Coding sequence (CDS) from alignment at sc0000315_pilon:83724..84685+

>XLOC_012939 ID=XLOC_012939|Name=XLOC_012939|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000315_pilon:83724..84685+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTTCTGACTCAAATTTGAATTCACTCGAAACCAAAGTGAACTCTGATCT
AGTTAAACTTTCTTCTTGGCTTCGTGCGAATAAAATTTCTCTTAACACTG
CGAAAACAGAGGTCATTTTGTTCAGAAGCAAACATAAATCTGTACCTTAC
TCTATGAATCTTTACCTTGAAGGACACACCTTAAAATTCACAAAGCAtgG
GTTCTGACTCAAATTTGAATTCACTCGAAACCAAAGTGAACTCTGATCTA
GTTAAACTTTCTTCTTGGCTTCGTGCGAATAAAATTTCTCTTAACACTGC
GAAAACAGAGGTCATTTTGTTCAGAAGCAAACATAAATCTGTACCTTACT
CTATGAATCTTTACCTTGAAGGACACACCTTAAAATTCACAAAGCAtgAT
GAATTTCTAGCCTGGAATTTTCACTTTGATCATTTATCCACAAAGCTTAG
AAGATCTAATGGTATTTTGTCCAAACTACGCCACTTTGTTCCACAACTAG
TTCTCAAAACTTTATACTATGCTATGTTCCACTCTCATATGTCTTACGCA
ACAATTATCTGGGGACAAGGCCTTACTCAAAACTCTCGAAtaggaaaatt
acaaaaaagatgtttgcgtattctaactttttcagattttaatgctGAGA
CTTCCcctctttttcaaaaccttaaaatcccAACTTTACCAAATACTGTT
atcaaattcaatattcaacttGTACATCAAACTCTATCTAATCTTTCTCC
TGAAGCCGTTACAAACGTGATGAATTTCTAGCCTGGAATTTTCACTTTGA
TCATTTATCCACAAAGCTTAGAAGATCTAATGGTATTTTGTCCAAACTAC
GCCACTTTGTTCCACAACTAGTTCTCAAAACTTTATACTATGCTATGTTC
CACTCTCATATGTCTTACGCAACAATTATCTGGGGACAAGGCCTTACTCA
AAACTCTCGAAtaggaaaattacaaaaaagatgtttgcgtattctaactt
tttcagattttaatgctGAGACTTCCcctctttttcaaaaccttaaaatc
ccAACTTTACCAAATACTGTTatcaaattcaatattcaacttGTACATCA
AACTCTATCTAATCTTTCTCCTGAAGCCGTTACAAACGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_012939XLOC_012939-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000315_pilongenomesc0000315_pilon:83724..84685 +
Properties
Property NameValue
Aaloc277-645:594
Aaloc76-273:1